Text Box: The next charts are based on the number of s2n in each window above 1. I am unsure of the best way to do this: raw number > 1 or percentage > 1 to account for a different number of 7mers in each window (due to filtering and duplicates).
Text Box: The following charts are based on a binomial p-value calculation. We count the number of genes in each window with a p < .05. Again we do both raw counts and percentage calculations.