Conservation for mir-90


Color Code:    mir sequence   mir* sequence   predicted mir*   mutation

mir-90   chrIII:8873874-8874011    View MI0000059 at mirBase   

Species Fold Score
ce4 CUUUCCAUUUCUAACA--------------AAACGGGCGCCA--UUUCGAGCGGCUUUCAACGACGAUAUCAACCGA-----CAACUCACACUUUUGCGUGUUGAUAUGUUGUUU-GAAUGCCCCUUGAAUUGGAUGCCACAGGUUUUCUUUUAUUUUA
cb3 ------------------------------------GCACCA--UUUCAAGCGGCCUUCAACGACUAUAUCAACCGA-----AUCCAAAU----UCGCGAGUUGAUAUGUUGUUUUGAAUGUCACUUGAGGU-------------UUUUGCU--UUUUC
caeRem2 UCUCCUU-----------------------GUUUGGGCCUCA--CUUCGAGCGGUAUUCAACGACUAUCUCAACCGAUAUACAUACCAAC-------CGAGUUGAUAUGUUGUUU-GAAUGCCCCUUGAACUCGAGGCCCCUAGU==============
caePb1 UUUUCUUCACCCCACCGAAGAUGGUCCUGGACUUGGGCGCCAAGUUUCGAGCGGCUUUCAACAACGAUAUCAACCGA-----UUUUCAGUAAA-UUGCGAGUUGAUAUGUUGUUU-GAAUGCCCCUUGAGUUGGUUGCC------==============
priPac1 ===============================================================================================================================================================

mir-90   chrIII:8873874-8874011    View MI0000059 at mirBase   

Species Fold Score
ce4 CUUUCCAUUUCUAACA--------------AAACGGGCGCCA--UUUCGAGCGGCUUUCAACGACGAUAUCAACCGA-----CAACUCACACUUUUGCGUGUUGAUAUGUUGUUU-GAAUGCCCCUUGAAUUGGAUGCCACAGGUUUUCUUUUAUUUUA
cb3 ------------------------------------GCACCA--UUUCAAGCGGCCUUCAACGACUAUAUCAACCGA-----AUCCAAAU----UCGCGAGUUGAUAUGUUGUUUUGAAUGUCACUUGAGGU-------------UUUUGCU--UUUUC
caeRem2 UCUCCUU-----------------------GUUUGGGCCUCA--CUUCGAGCGGUAUUCAACGACUAUCUCAACCGAUAUACAUACCAAC-------CGAGUUGAUAUGUUGUUU-GAAUGCCCCUUGAACUCGAGGCCCCUAGU==============
caePb1 UUUUCUUCACCCCACCGAAGAUGGUCCUGGACUUGGGCGCCAAGUUUCGAGCGGCUUUCAACAACGAUAUCAACCGA-----UUUUCAGUAAA-UUGCGAGUUGAUAUGUUGUUU-GAAUGCCCCUUGAGUUGGUUGCC------==============