Conservation for mir-44


Color Code:    mir sequence   mir* sequence   predicted mir*   mutation

mir-44   chrII:11889912-11890047    View MI0000015 at mirBase   

Species Fold Score
ce4 AGU----------------------------UUAAGGCCU-----------CUGAAAAGAGAAAAUGGCCAAUCUGGAUGUGCUCGUUGGUCAUAGACG-UCAACA---CGAACUGUUCAUAUGACUAGAGACACAUUCAGCUUGGCCUGCUUCUCUAGUUUUGAAUUUUUCAA----CAGU
cb3 CUCAUUUUGUGAUUGUUUGAAGAAA------AGAAGGCUCAUGGAAGAG--AAAAGAAGAGAGAAGGGCCGAUCUGGAUGUGCUCGUUAGUCAUAGACGAAUCACACUUGAAA--GGUCAUAUGACUAGAGACACAUUCAGCUUGGCCUGGAUCUCAACGUUUGAGAUUGAAAGAUUGCUGG
caeRem2 UCUGAAUUGUAGGUAUUCUCAGAGAGUAGGUAAGAGGCCGGAAGAAGAGUUAGAGAGUGAGAGAAUGGCCGAUCUGGAUGUGCUCGUUAGUCAUAGACGAAUCACA---GAAAACAGUCAUAUGACUAGAGACACAUUCAGCUUGGCCUGGAUCUCAAAUU-----================
caePb1 AAAAGUCUCGGGUUGAUUCGAGUAA------GUUAGGCC------AAGG--AGACGAAGAGAGAAUGGCCGAUCUGGAUGUGCUCGUUAGUCAUAGACGAUACACA---GAGAACGGUCAUAUGACUAGAGACACAUUCAGCUUGGCCUGGAUCUCAGAAUUUGAG================
priPac1 ======================================================================================================================================================================================

mir-44   chrII:11889912-11890047    View MI0000015 at mirBase   

Species Fold Score
ce4 AGU----------------------------UUAAGGCCU-----------CUGAAAAGAGAAAAUGGCCAAUCUGGAUGUGCUCGUUGGUCAUAGACG-UCAACA---CGAACUGUUCAUAUGACUAGAGACACAUUCAGCUUGGCCUGCUUCUCUAGUUUUGAAUUUUUCAA----CAGU
cb3 CUCAUUUUGUGAUUGUUUGAAGAAA------AGAAGGCUCAUGGAAGAG--AAAAGAAGAGAGAAGGGCCGAUCUGGAUGUGCUCGUUAGUCAUAGACGAAUCACACUUGAAA--GGUCAUAUGACUAGAGACACAUUCAGCUUGGCCUGGAUCUCAACGUUUGAGAUUGAAAGAUUGCUGG
caeRem2 UCUGAAUUGUAGGUAUUCUCAGAGAGUAGGUAAGAGGCCGGAAGAAGAGUUAGAGAGUGAGAGAAUGGCCGAUCUGGAUGUGCUCGUUAGUCAUAGACGAAUCACA---GAAAACAGUCAUAUGACUAGAGACACAUUCAGCUUGGCCUGGAUCUCAAAUU-----================
caePb1 AAAAGUCUCGGGUUGAUUCGAGUAA------GUUAGGCC------AAGG--AGACGAAGAGAGAAUGGCCGAUCUGGAUGUGCUCGUUAGUCAUAGACGAUACACA---GAGAACGGUCAUAUGACUAGAGACACAUUCAGCUUGGCCUGGAUCUCAGAAUUUGAG================