Conservation for mir-43


Color Code:    mir sequence   mir* sequence   predicted mir*   mutation

mir-43   chrII:11889799-11889936    View MI0000014 at mirBase   

Species Fold Score
ce4 AGGUCCAAAAAGGGGUAACUAUUGGCA----CUAG------------------------------------------------UCGCCCGUGACAUCAAGAAACUAGUGA-UUAUGCC----AAACC---ACAGGGACAUAUCACAGUUUACUUGCUGUCGCGGGCGG--------UGCUGAGU----------------------------UUAAGGCCU-----------CUGAAAAGAGAA
cb3 AGGUCCUAAAGGGUUCCAUGACCCAUGACCCCUAGAAUUUCAAAUAAAUUAGGUUAUUCGAAAACAUAAGAAAAGAGGCGAUUCUGCCCGUGACAUCAAGAUGCUUGUGA-UUAUGC----GAAAAU---GUUGGGACAUAUCACAGUUUACUUGCUGUCGCAGGCGGAUUAUUGCUAUUGCUCAUUUUGUGAUUGUUUGAAGAAA------AGAAGGCUCAUGGAAGAG--AAAAGAAGAGAG
caeRem2 AGGUCCUCGAGGGUUUCUUUGCCCAAA----CGAGAA------------------AUUAGAAAA---GAAAAAAGAGGCGAUUCUGCCCGUGACAACAAGAAACUUGUGA-UUAUGCC-UAGAGAAUGAAGAAGGGACAUAUCACAGUUUACUUGCUGUCGCAGGCGG--------UGUCAUCUGAAUUGUAGGUAUUCUCAGAGAGUAGGUAAGAGGCCGGAAGAAGAGUUAGAGAGUGAGAG
caePb1 AGGUCCUGAAGGGUUUCUUUGUAAGAAAU--CGAAAAGAAGAAA-----------AAGAGCAGA---AUGAAAAGUGGUGUCACUGCCCGUGAUAUCAAGGAACUUGUGAUUUAUGCCAUAACUAACAUAACCUCGACAUAUCACAGUUUACUUGCUGUCGCAGGCAG----GUGUUACUGAAAAGUCUCGGGUUGAUUCGAGUAA------GUUAGGCC------AAGG--AGACGAAGAGAG
priPac1 ====================================================================================================================================================================================================================================================

mir-43   chrII:11889799-11889936    View MI0000014 at mirBase   

Species Fold Score
ce4 AGGUCCAAAAAGGGGUAACUAUUGGCA----CUAG------------------------------------------------UCGCCCGUGACAUCAAGAAACUAGUGA-UUAUGCC----AAACC---ACAGGGACAUAUCACAGUUUACUUGCUGUCGCGGGCGG--------UGCUGAGU----------------------------UUAAGGCCU-----------CUGAAAAGAGAA
cb3 AGGUCCUAAAGGGUUCCAUGACCCAUGACCCCUAGAAUUUCAAAUAAAUUAGGUUAUUCGAAAACAUAAGAAAAGAGGCGAUUCUGCCCGUGACAUCAAGAUGCUUGUGA-UUAUGC----GAAAAU---GUUGGGACAUAUCACAGUUUACUUGCUGUCGCAGGCGGAUUAUUGCUAUUGCUCAUUUUGUGAUUGUUUGAAGAAA------AGAAGGCUCAUGGAAGAG--AAAAGAAGAGAG
caeRem2 AGGUCCUCGAGGGUUUCUUUGCCCAAA----CGAGAA------------------AUUAGAAAA---GAAAAAAGAGGCGAUUCUGCCCGUGACAACAAGAAACUUGUGA-UUAUGCC-UAGAGAAUGAAGAAGGGACAUAUCACAGUUUACUUGCUGUCGCAGGCGG--------UGUCAUCUGAAUUGUAGGUAUUCUCAGAGAGUAGGUAAGAGGCCGGAAGAAGAGUUAGAGAGUGAGAG
caePb1 AGGUCCUGAAGGGUUUCUUUGUAAGAAAU--CGAAAAGAAGAAA-----------AAGAGCAGA---AUGAAAAGUGGUGUCACUGCCCGUGAUAUCAAGGAACUUGUGAUUUAUGCCAUAACUAACAUAACCUCGACAUAUCACAGUUUACUUGCUGUCGCAGGCAG----GUGUUACUGAAAAGUCUCGGGUUGAUUCGAGUAA------GUUAGGCC------AAGG--AGACGAAGAGAG