Conservation for mir-42


Color Code:    mir sequence   mir* sequence   predicted mir*   mutation

mir-42   chrII:11889700-11889834    View MI0000013 at mirBase   

Species Fold Score
ce4 CUAAAAUCCCCAUAAACCCUUCGCGGACCUUUGUGGGUGUUUGCUUUUUCGGUGAAGUU-GUCUUCCGUAGCUUCUUCUUCACCGGGUUAACAUCUACAGAGGUCCAAAAAGGGGUAACUAUUGGCA----CUAG------------------------------------------------UCGC
cb3 C----CUAU-----AACCCUUGUCGGACCUUUGUGGGUGUUCGCCUUUUCGGUGAAGUU-----ACUGAAU--GCUUCUUCACCGGGUUAACAUCUACAGAGGUCCUAAAGGGUUCCAUGACCCAUGACCCCUAGAAUUUCAAAUAAAUUAGGUUAUUCGAAAACAUAAGAAAAGAGGCGAUUCUGC
caeRem2 CU---UUAUUCCCAAACCCUUGUCGGACCUUUGUGGAUGUUUCCUUUUUCGGUGAAGUUGUUCCGUUGAAUUAUCUUCUUCACCGGGUUAACAUCUACAGAGGUCCUCGAGGGUUUCUUUGCCCAAA----CGAGAA------------------AUUAGAAAA---GAAAAAAGAGGCGAUUCUGC
caePb1 GG--AUUCUCCCUCAACCCUUGUCGGACCUUUGUGGAUGUUUGCCUUUUCGGUGAAGUU------UCAAAAGAUAUUCUUCACCGGGUUAACAUCUACAGAGGUCCUGAAGGGUUUCUUUGUAAGAAAU--CGAAAAGAAGAAA-----------AAGAGCAGA---AUGAAAAGUGGUGUCACUGC
priPac1 ===========================================================================================================================================================================================

mir-42   chrII:11889700-11889834    View MI0000013 at mirBase   

Species Fold Score
ce4 CUAAAAUCCCCAUAAACCCUUCGCGGACCUUUGUGGGUGUUUGCUUUUUCGGUGAAGUU-GUCUUCCGUAGCUUCUUCUUCACCGGGUUAACAUCUACAGAGGUCCAAAAAGGGGUAACUAUUGGCA----CUAG------------------------------------------------UCGC
cb3 C----CUAU-----AACCCUUGUCGGACCUUUGUGGGUGUUCGCCUUUUCGGUGAAGUU-----ACUGAAU--GCUUCUUCACCGGGUUAACAUCUACAGAGGUCCUAAAGGGUUCCAUGACCCAUGACCCCUAGAAUUUCAAAUAAAUUAGGUUAUUCGAAAACAUAAGAAAAGAGGCGAUUCUGC
caeRem2 CU---UUAUUCCCAAACCCUUGUCGGACCUUUGUGGAUGUUUCCUUUUUCGGUGAAGUUGUUCCGUUGAAUUAUCUUCUUCACCGGGUUAACAUCUACAGAGGUCCUCGAGGGUUUCUUUGCCCAAA----CGAGAA------------------AUUAGAAAA---GAAAAAAGAGGCGAUUCUGC
caePb1 GG--AUUCUCCCUCAACCCUUGUCGGACCUUUGUGGAUGUUUGCCUUUUCGGUGAAGUU------UCAAAAGAUAUUCUUCACCGGGUUAACAUCUACAGAGGUCCUGAAGGGUUUCUUUGUAAGAAAU--CGAAAAGAAGAAA-----------AAGAGCAGA---AUGAAAAGUGGUGUCACUGC