Conservation for mir-39


Color Code:    mir sequence   mir* sequence   predicted mir*   mutation

mir-39   chrII:11537978-11538104    View MI0000010 at mirBase   

Species Fold Score
ce4 C----------UGAUUAUU-GAAUU--CCUGAUAUACCGAGAGCCCAGCUGAUUUCGUCU-UGGUAAUAAGCU-CGUC-AUUGAGAUUAUCACCGGGUGUAAAUCAGCUUGGCUCU---GGUGUCUCCGAACCUCCUGUCCGCAC
cb3 U--UACUAU--CUACUACU-AUAUU--CCAGAGAUGCAGGGAGCCCAACUGGUUCUCACUGCAGUGAUAAGCUAUGUU-AC--AGUCUAUCACCGGGUGAAAAACGGUUAGGCUCUUUAAGCAUCUCUGUAUCCCCUGCCCUCAC
caeRem2 UUCUAUUAUUCCAACUACUAAUAUU--UCUGAGAUCCAGAGAGCCCAACUGUUUCUUUCCCCGGUAAUAAACUUCAAC-AC---GACUAUCACCGGGUAUGAAUCAGUUAGGCUCUUCUGGUAUCUUCAAA--CCCUGCCCGUAA
caePb1 UUCUG------CUACUACU-AUAUUGGCAAGAAGUCCCCAGGGCCUAGCUGAUUUCAACCACGGUAAUAAGCUCCAUAGAU--AGCCUAUCACCGGGUGGAAAUCAGUUAGGGCCUUCUGG------------------------
priPac1 =================================================================================================================================================

mir-39   chrII:11537978-11538104    View MI0000010 at mirBase   

Species Fold Score
ce4 C----------UGAUUAUU-GAAUU--CCUGAUAUACCGAGAGCCCAGCUGAUUUCGUCU-UGGUAAUAAGCU-CGUC-AUUGAGAUUAUCACCGGGUGUAAAUCAGCUUGGCUCU---GGUGUCUCCGAACCUCCUGUCCGCAC
cb3 U--UACUAU--CUACUACU-AUAUU--CCAGAGAUGCAGGGAGCCCAACUGGUUCUCACUGCAGUGAUAAGCUAUGUU-AC--AGUCUAUCACCGGGUGAAAAACGGUUAGGCUCUUUAAGCAUCUCUGUAUCCCCUGCCCUCAC
caeRem2 UUCUAUUAUUCCAACUACUAAUAUU--UCUGAGAUCCAGAGAGCCCAACUGUUUCUUUCCCCGGUAAUAAACUUCAAC-AC---GACUAUCACCGGGUAUGAAUCAGUUAGGCUCUUCUGGUAUCUUCAAA--CCCUGCCCGUAA
caePb1 UUCUG------CUACUACU-AUAUUGGCAAGAAGUCCCCAGGGCCUAGCUGAUUUCAACCACGGUAAUAAGCUCCAUAGAU--AGCCUAUCACCGGGUGGAAAUCAGUUAGGGCCUUCUGG------------------------