Conservation for mirtron-20


Color Code:    mir sequence   mir* sequence   predicted mir*   mutation

   chr3R:4134132-4134227
Species Sequence
dm2 AGCGGTCGCACATGTCTAAGGTGAGCACGAT----------GGCCACATT-T-ATTGGG-----------------CAACCAATGAATTCCCGCCTGCCCA---------CAGGTTCACTCGGTCTGCTGGAA
Sim1 AGCGGTCGCACATGTCCAAGGTGAGCACGAT----------GGCCACATT-T-ATTGGG-----------------CAACCCATGAAT--CCTCCTGCCCA---------CAGGTTCACTCGGTCTGCTGGAA
Sec1 AGCGGTCGCACATGTCCAAGGTGAGCACGAT----------GGCCACATT-T-ATTGGG-----------------CAACCCATGAAT--CCTCCTGCCCA---------CAGGTTCACTCGGTCTGCTGGAA
Yak2 AGCGGGCGCACATGTCCAAGGTGAGCACGGC----------GGCCCCAAA---ATCAAAG-----TTCT-------CTGACCA-AAAT-----CCCGCCCA---------CAGGTTCACTCCGTCTGCTGGAA
Ere2 AGCGGGCGCACATGTCCAAGGTGAGCACGAT----------GGCCCCGAC---ATCGAAA-----TTCTAAATCCCCAATCCA-AAAT-----CCCGCCCA---------CAGGTTCACTCAGTCTGCTGGAA
Ana3 AGCGAGCCCATCTGAACAAGGTAATTTGAATTTGTGTTTTTGGCCAGGAG--------------------------CAATTGATGTATTTGTTTATGTTCG---------AAGGTACACTCTGTTTGCTGGAA
dp4 AGCGGGCCCACACGTCCAAGGTAAG-AAGCT----------AGTCGAAAA---ATTGAGG---CATTTT-------CACGAAACAATT--------GTCTGAGG------CAGGTTCACTCCGTCTGCTGGAA
Per1 AGCGGGCCCACACGTCCAAGGTAAG-AAGCT----------GGTCGAAAA---ATTGAGG---CATTTT-------CACGAAACAAAT--------GTCTGAGG------CAGGTTCACTCCGTCTGCTGGAA
Wil1 AGCGGGCACATATGTCCAAGGTAATCAAATT----------TAATGTAAT-TTACCAGACAAGCGTTCC-------CTTTTTACAAATTTTCTTTCCCTGG---------CAGGTTCACTCGGTTTGCTGGAA
Vir3 AGCGGCCACACATGTCAAAGGTGGGTCTGTC----------GGTGGCATT-TAATTGGTTT--------------------------------TCTTTTCG---------TAGGTGCATTCGGTGTGCTGGAA
Moj3 AGCGGCCGCATATGTCAAAGGTGAGTATGCCTCG-------AATTGTGTTGCAATCTGCTT--------------------------------CTTCTTCGCATTCGCCTTAGGTGCATTCGGTTTGCTGGAA
Gri2 AGCGGCCACATACCGCAAAGGTAAAC===================================================================CTTCTTTT---------TAGGTTCATTCGGTTTGCTGGAG

   chr3R:4134132-4134227
Species Sequence