Conservation for mir-309


Color Code:    mir sequence   mir* sequence   predicted mir*   mutation

miR-309   chr2R:15176548-15176657
Species Sequence
dm2 ATAG----CAATTATACGACAAACCTTGTTCGGTTTTGCCA----------------ATTTCCAAGC-------CAGCACTGGGTAAAGTTTGTCCTATAATCCC--GAAAC
Sim1 ACAG----CAATTATACGACAAACCTTGTTCGGTTTTGCCA----------------ATTTCCAAGC-------CAGCACTGGGTAAAGTTTGTCCTATAATCCC--GAAAC
Sec1 ACAG----CAATTATACGACAAACCTTGTTCGGTTTTGCCA----------------ATTTCCAAGC-------CAGCACTGGGTAAAGTTTGTCCTATAATCCC--GAAAC
Yak2 ACAG----CAATTATACGACAAACCTTGTTCTGTTTTGCCA----------------ATTTCCTAGC-------CAGCACTGGGTAAAGTTTGTCCTATAATCCC--GAAAC
Ere2 ACAG----CAATTATACGACAAACCTTGTTCGGTTTTGCCA----------------ATTTCCTAGC-------CAGCACTGGGTAAAGTTTGTCCTATAATCCC--GAAAC
Ana3 TCA--------TTATACGACAAACCTTGTTCGGTTTTGCCA----------------ATTTCCTAGC--------AGCACTGGGTAAAGTTTGTCCTATAATCTATAAAAAA
dp4 ACT-------ATTATACGATAAACTTTGTTCAGTTTTGCCA----------------ACTTGCTTGC--------AGCACTGGGTGAAGTTTGTCTTATAATCCC--ACAGT
Per1 ACT-------ATTATACGATAAACTTTGTTCAGTTTTGCCA----------------ACTTGCTTGC--------AGCACTGGGTGAAGTTTGTCTTATAATCCC--ACAGT
Wil1 TAA------TATTATATGATAAACTTTGTTCAGTTTTGCAATCAAAAAATCAAGAAAATTCCTTAGC--------ATCACTGGGTGAAGTTTGTCTTATAATCTT--TAAAC
Vir3 ACAA----ATATTATATGGTAAACTTTGTTCAGTTTTGCCA----------------GGCTCT-TTTTGTGCG-CATCACTGGGTGAAGTTTGTCGTATAATCGC--AAAAA
Moj3 AGAACAGAATATTATAAGGTAAACTTTGTTCAGTTTTGCCG----------------GGTTCTATGTTGTGCG-CATCACTGGGTGAAGTTTGTCGTATAATCG---AAACG
Gri2 ATTA-----CATTATATGGCAAACCTTGTTCAGTTTTGACA----------------ACTTTGTTTCTGTGCATCATCACTGGGTGAAGTTTGTCGTATAATCG---AAATG

miR-309   chr2R:15176548-15176657
Species Sequence
dm2 ATAG----CAATTATACGACAAACCTTGTTCGGTTTTGCCA----------------ATTTCCAAGC-------CAGCACTGGGTAAAGTTTGTCCTATAATCCC--GAAAC
Sim1 ACAG----CAATTATACGACAAACCTTGTTCGGTTTTGCCA----------------ATTTCCAAGC-------CAGCACTGGGTAAAGTTTGTCCTATAATCCC--GAAAC
Sec1 ACAG----CAATTATACGACAAACCTTGTTCGGTTTTGCCA----------------ATTTCCAAGC-------CAGCACTGGGTAAAGTTTGTCCTATAATCCC--GAAAC
Yak2 ACAG----CAATTATACGACAAACCTTGTTCTGTTTTGCCA----------------ATTTCCTAGC-------CAGCACTGGGTAAAGTTTGTCCTATAATCCC--GAAAC
Ere2 ACAG----CAATTATACGACAAACCTTGTTCGGTTTTGCCA----------------ATTTCCTAGC-------CAGCACTGGGTAAAGTTTGTCCTATAATCCC--GAAAC
Ana3 TCA--------TTATACGACAAACCTTGTTCGGTTTTGCCA----------------ATTTCCTAGC--------AGCACTGGGTAAAGTTTGTCCTATAATCTATAAAAAA
dp4 ACT-------ATTATACGATAAACTTTGTTCAGTTTTGCCA----------------ACTTGCTTGC--------AGCACTGGGTGAAGTTTGTCTTATAATCCC--ACAGT
Per1 ACT-------ATTATACGATAAACTTTGTTCAGTTTTGCCA----------------ACTTGCTTGC--------AGCACTGGGTGAAGTTTGTCTTATAATCCC--ACAGT
Wil1 TAA------TATTATATGATAAACTTTGTTCAGTTTTGCAATCAAAAAATCAAGAAAATTCCTTAGC--------ATCACTGGGTGAAGTTTGTCTTATAATCTT--TAAAC
Vir3 ACAA----ATATTATATGGTAAACTTTGTTCAGTTTTGCCA----------------GGCTCT-TTTTGTGCG-CATCACTGGGTGAAGTTTGTCGTATAATCGC--AAAAA
Moj3 AGAACAGAATATTATAAGGTAAACTTTGTTCAGTTTTGCCG----------------GGTTCTATGTTGTGCG-CATCACTGGGTGAAGTTTGTCGTATAATCG---AAACG
Gri2 ATTA-----CATTATATGGCAAACCTTGTTCAGTTTTGACA----------------ACTTTGTTTCTGTGCATCATCACTGGGTGAAGTTTGTCGTATAATCG---AAATG