| No | Gene | Len. | Blast qCov/tCov | Domain qCov/tCov | EST all/spliced | Clean m full/part | Clean r full/part | Clean d full/part | Synteny m/r/d | Dupl. | Incompl. | CpG | OR | lr prob. | Ensemble/nscan/sgp/ eXoniphy/transmap | PET/SAGE/CAGE | id |
| 1 | chr1:+26409K | 879 | 0.4/0.3 | -/- | 0.0/0.0 | fsh/fsh,stop | fsh,stop/fsh | fsh,stop/fsh,stop | 1.0/1.0/0.9 | 0.0 | 252.0 | 0.0 | 0.0 | 0.07 | | 0.0/0.0/0.0 | seg4.0004;orfchr1.577965 |
| 2 | chr1:+226200K | 879 | 0.6/0.3 | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.8/0.8/0.8 | 0.0 | 0.0 | 0.0 | 0.0 | 0.08 | | 0.0/0.0/0.0 | seg4.0002;orfchr1.661135 |
| 3 | chr1:-74708K | 1788 | 0.9/0.4 | -/- | 0.0/0.0 | fsh,stop/fsh | fsh,stop,warnN/fsh,stop,warnN | fsh,stop/fsh,stop | 0.9/0.7/1.0 | 0.0 | 393.0 | 0.0 | 0.0 | 0.35 | | 0.0/0.0/1.0 | seg4.0005;orfchr1.601960 |
| 4 | chr10:-102965K | 474 | -/- | 0.6/0.2 | 0.2/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.8/0.8/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.14 | | 0.0/0.0/3.0 | seg4.0006;orfchr10.49624 |
| 5 | chr10:-126905K | 543 | 0.5/0.0 | -/- | 1.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | noaln/noaln | 0.8/0.8/0.0 | 0.0 | 159.0 | 0.0 | 0.0 | 0.25 | e | 0.0/0.0/0.0 | seg4.0008;orfchr10.63917 |
| 6 | chr10:-134067K | 702 | 0.5/0.1 | -/- | 0.4/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.3/0.3/0.9 | 0.0 | 188.0 | 0.0 | 0.0 | 0.10 | | 0.0/0.0/3.0 | seg4.0010;orfchr10.72654 |
| 7 | chr11:+4356K | 840 | 0.9/0.8 | 0.7/0.7 | 0.6/0.0 | fsh/fsh | fsh,stop/fsh,stop | fsh/fsh | 1.0/1.0/1.0 | 0.0 | 103.0 | 0.0 | 0.8 | 0.87 | xt | 0.0/0.0/0.0 | seg2.0019;orfchr11.83553 |
| 8 | chr11:+4453K | 738 | 0.8/0.6 | 0.8/0.7 | 0.4/0.0 | fsh/fsh | fsh/fsh | fsh/fsh | 1.0/1.0/1.0 | 0.0 | 198.0 | 0.0 | 0.7 | 0.21 | x | 0.0/0.0/0.0 | seg2.0022;orfchr11.83657 |
| 9 | chr11:+5380K | 951 | 1.0/1.0 | -/- | 0.1/0.0 | fsh/fsh | fsh/fsh | fsh/fsh | 1.0/1.0/1.0 | 0.0 | 0.0 | 0.0 | 1.0 | 0.26 | esxt | 0.0/0.0/0.0 | seg2.0034;orfchr11.84552 |
| 10 | chr11:+5743K | 888 | 1.0/0.9 | 0.8/1.0 | 0.0/0.0 | OK/OK | OK/OK | stop/OK | 1.0/1.0/1.0 | 0.0 | 60.0 | 0.0 | 1.0 | 0.73 | xt | 0.0/0.0/0.0 | seg2.0047;orfchr11.84944 |
| 11 | chr11:+113156K | 690 | 0.6/0.7 | 0.8/1.0 | 0.0/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.92 | nx | 0.0/0.0/0.0 | seg3.0006;orfchr11.135787 |
| 12 | chr11:+125723K | 360 | 0.5/0.1 | -/- | 1.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | noaln/noaln | 0.8/0.7/0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.20 | | 0.0/0.0/0.0 | seg4.0014;orfchr11.145887 |
| 13 | chr11:-4951K | 696 | 1.0/0.7 | 0.8/0.7 | 0.0/0.0 | OK/OK | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 1.0/1.0/1.0 | 0.0 | 252.0 | 0.0 | 1.0 | 0.08 | t | 0.0/0.0/0.0 | seg3.0017;orfchr11.83953 |
| 14 | chr11:-5945K | 819 | 1.0/0.7 | 0.9/1.0 | 0.0/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 138.0 | 0.0 | 1.0 | 0.40 | xt | 0.0/0.0/0.0 | seg2.0050;orfchr11.85139 |
| 15 | chr11:-18865K | 768 | 0.8/0.6 | 0.6/0.6 | 0.0/0.0 | fsh,stop/fsh,stop | noaln/noaln | fsh/fsh | 0.8/0.0/1.0 | 0.0 | 223.0 | 0.0 | 0.0 | 0.06 | | 0.0/0.0/0.0 | seg3.0010;orfchr11.92677 |
| 16 | chr11:-48344K | 690 | 1.0/0.7 | 0.9/0.9 | 0.0/0.0 | fsh,stop/OK | fsh,stop/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 219.0 | 0.0 | 1.0 | 0.35 | xt | 0.0/0.0/0.0 | seg2.0025;orfchr11.104112 |
| 17 | chr11:-55735K | 708 | 1.0/0.7 | 0.9/0.8 | 0.0/0.0 | noaln/noaln | noaln/noaln | OK/OK | 0.0/0.0/1.0 | 0.0 | 240.0 | 0.0 | 1.0 | 0.05 | ex | 0.0/0.0/0.0 | seg3.0025;orfchr11.105320 |
| 18 | chr11:-58812K | 1083 | 1.0/0.5 | 0.4/0.8 | 0.0/0.0 | fsh/OK | fsh/OK | fsh/OK | 1.0/1.0/1.0 | 0.0 | 980.0 | 0.0 | 0.0 | 0.12 | xt | 0.0/0.0/0.0 | seg3.0038;orfchr11.107166 |
| 19 | chr11:-58916K | 831 | 1.0/0.8 | 0.8/0.9 | 0.0/0.0 | fsh/fsh | OK/OK | fsh,stop/fsh | 1.0/1.0/1.0 | 0.0 | 123.0 | 0.0 | 1.0 | 0.25 | et | 0.0/0.0/0.0 | seg2.0049;orfchr11.107553 |
| No | Gene | Len. | Blast qCov/tCov | Domain qCov/tCov | EST all/spliced | Clean m full/part | Clean r full/part | Clean d full/part | Synteny m/r/d | Dupl. | Incompl. | CpG | OR | lr prob. | Ensemble/nscan/sgp/ eXoniphy/transmap | PET/SAGE/CAGE | id |
| 20 | chr11:-62790K | 420 | 1.0/0.4 | -/- | 0.0/0.0 | fsh,stop/fsh,stop | noaln/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 33.0 | 0.0 | 0.0 | 0.03 | sx | 0.0/0.0/0.0 | seg4.0018;orfchr11.110742 |
| 21 | chr11:-123370K | 999 | 0.9/1.0 | 0.7/1.0 | 0.0/0.0 | fsh,stop/OK | fsh,stop/OK | OK/OK | 1.0/0.5/1.0 | 0.0 | 0.0 | 0.0 | 0.9 | 0.38 | esxt | 0.0/0.0/0.0 | seg2.0011;orfchr11.144460 |
| 22 | chr12:+47240K | 795 | 1.0/0.8 | 0.5/0.5 | 0.0/0.0 | fsh,stop/OK | fsh,stop/OK | fsh,stop/OK | 1.0/1.0/1.0 | 0.0 | 60.0 | 0.0 | 1.0 | 0.54 | x | 0.0/0.0/0.0 | seg2.0058;orfchr12.172824 |
| 23 | chr12:+54068K | 882 | 1.0/0.9 | 0.9/1.0 | 0.0/0.0 | OK/OK | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 1.0/1.0/1.0 | 0.0 | 51.0 | 0.0 | 1.0 | 0.34 | xt | 0.0/0.0/0.0 | seg2.0061;orfchr12.178798 |
| 24 | chr12:+54203K | 633 | 1.0/0.7 | 0.8/0.7 | 0.0/0.0 | OK/OK | noaln/noaln | noaln/noaln | 1.0/0.0/0.0 | 0.0 | 246.0 | 0.0 | 1.0 | 0.06 | xt | 0.0/0.0/0.0 | seg3.0051;orfchr12.178579 |
| 25 | chr12:+54255K | 762 | 1.0/0.8 | 0.9/0.9 | 0.0/0.0 | OK/OK | noaln/noaln | noaln/noaln | 1.0/0.0/0.0 | 0.0 | 174.0 | 0.0 | 1.0 | 0.08 | xt | 0.0/0.0/0.0 | seg2.0062;orfchr12.178924 |
| 26 | chr12:+64409K | 714 | 0.6/0.7 | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/noaln | 0.8/0.2/0.1 | 0.0 | 0.0 | 0.8 | 0.0 | 0.02 | | 0.0/0.0/1.0 | seg3.0053;orfchr12.183092 |
| 27 | chr12:+127465K | 642 | 1.0/0.2 | -/- | 0.0/0.0 | OK/OK | OK/OK | fsh/fsh | 1.0/1.0/1.0 | 0.0 | 252.0 | 0.4 | 0.0 | 0.02 | x | 0.0/0.0/0.0 | seg4.0023;orfchr12.206836 |
| 28 | chr12:-6938K | 540 | 0.7/0.1 | -/- | 0.8/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.2/0.4/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.10 | | 0.0/0.0/1.0 | seg4.0030;orfchr12.159464 |
| 29 | chr12:-16321K | 408 | 0.6/0.2 | -/- | 0.0/0.0 | OK/OK | OK/OK | fsh,stop/OK | 0.9/0.9/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.03 | | 0.0/0.0/0.0 | seg4.0024;orfchr12.163600 |
| 30 | chr12:-27807K | 561 | 0.9/0.5 | -/- | 0.8/0.0 | fsh,stop/fsh | fsh,stop/fsh | stop/OK | 1.0/1.0/1.0 | 0.0 | 102.0 | 0.0 | 0.0 | 0.70 | xt | 0.0/0.0/0.0 | seg4.0027;orfchr12.166728 |
| 31 | chr12:-120734K | 399 | 0.9/0.4 | -/- | 0.9/0.0 | fsh,stop/fsh,stop | fsh,stop,warnN/fsh,stop,warnN | fsh,stop/fsh,stop | 0.8/0.8/0.9 | 0.0 | 462.0 | 0.2 | 0.0 | 0.27 | | 0.0/0.0/0.0 | seg4.0022;orfchr12.202585 |
| 32 | chr14:+73170K | 594 | 0.8/0.4 | 0.7/0.9 | 0.7/0.0 | noaln/noaln | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.7/0.9/0.9 | 0.0 | 0.0 | 0.9 | 0.0 | 0.75 | n | 0.0/0.0/2.0 | seg4.0035;orfchr14.270759 |
| 33 | chr15:+38850K | 528 | 1.0/1.0 | -/- | 1.0/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.91 | sxt | 0.0/0.0/5.0 | seg2.0064;orfchr15.307805 |
| 34 | chr15:+100186K | 876 | 1.0/0.9 | 0.8/1.0 | 0.0/0.0 | OK/OK | OK/OK | fsh,stop/fsh,stop | 1.0/1.0/1.0 | 0.0 | 60.0 | 0.0 | 1.0 | 0.35 | ext | 0.0/0.0/0.0 | seg2.0063;orfchr15.344391 |
| 35 | chr16:+11214K | 963 | 0.6/0.4 | -/- | 0.5/0.0 | fsh,stop/fsh,stop | fsh,stop,errN/fsh,errN | fsh,stop,errN/fsh,stop,errN | 0.6/0.1/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.19 | | 0.0/0.0/0.0 | seg4.0038;orfchr16.356591 |
| 36 | chr16:+65084K | 480 | 0.6/0.2 | -/- | 0.9/0.0 | noaln/noaln | noaln/noaln | fsh,stop/fsh,stop | 0.0/0.0/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.38 | | 0.0/0.0/0.0 | seg4.0040;orfchr16.380107 |
| 37 | chr17:+7174K | 507 | 1.0/0.3 | -/- | 0.0/0.0 | OK/OK | OK/OK | OK/OK | 0.9/0.9/1.0 | 0.0 | 108.0 | 0.0 | 0.0 | 0.07 | t | 0.0/0.0/4.0 | seg4.0054;orfchr17.406837 |
| 38 | chr17:+68099K | 366 | 0.6/0.1 | -/- | 1.0/0.0 | fsh,stop/fsh | fsh/fsh | fsh,stop/fsh | 0.8/0.8/0.7 | 0.0 | 469.0 | 0.5 | 0.0 | 0.26 | | 0.0/0.0/0.0 | seg4.0053;orfchr17.447189 |
| 39 | chr17:+77454K | 378 | 0.9/0.5 | -/- | 1.0/0.0 | noaln/noaln | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.0/0.6/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.46 | | 0.0/0.0/4.0 | seg4.0059;orfchr17.460034 |
| No | Gene | Len. | Blast qCov/tCov | Domain qCov/tCov | EST all/spliced | Clean m full/part | Clean r full/part | Clean d full/part | Synteny m/r/d | Dupl. | Incompl. | CpG | OR | lr prob. | Ensemble/nscan/sgp/ eXoniphy/transmap | PET/SAGE/CAGE | id |
| 40 | chr17:-30899K | 516 | 1.0/0.2 | -/- | 0.0/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 324.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | seg4.0046;orfchr17.423688 |
| 41 | chr17:-31267K | 429 | 1.0/0.3 | -/- | 0.0/0.0 | fsh/fsh | fsh/fsh | OK/OK | 1.0/1.0/0.8 | 0.0 | 1539.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | seg4.0047;orfchr17.423962 |
| 42 | chr17:-34083K | 1140 | 1.0/1.0 | 0.3/0.3 | 0.8/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 151.0 | 0.9 | 0.0 | 1.00 | ensxt | 0.0/1.0/24.0 | seg1.0004;chr17.35.001.a |
| 43 | chr17:-36712K | 1026 | 0.9/1.0 | -/- | 0.0/0.0 | stop/OK | stop/OK | stop/OK | 1.0/1.0/1.0 | 0.0 | 183.0 | 0.0 | 0.0 | 0.20 | | 0.0/0.0/0.0 | seg2.0068;orfchr17.428299 |
| 44 | chr17:-78651K | 441 | 0.8/0.0 | -/- | 0.5/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.9/0.6/0.6 | 0.0 | 48.0 | 0.8 | 0.0 | 0.08 | | 0.0/0.0/0.0 | seg4.0061;orfchr17.462433 |
| 45 | chr18:+8503K | 585 | 0.9/0.3 | -/- | 0.0/0.0 | fsh/OK | fsh/OK | fsh,stop/fsh,stop | 1.0/1.0/1.0 | 0.0 | 351.0 | 0.0 | 0.0 | 0.60 | ns | 0.0/0.0/0.0 | seg4.0065;orfchr18.467844 |
| 46 | chr18:-13605K | 363 | 0.9/0.1 | -/- | 1.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh | 0.9/0.9/0.7 | 0.0 | 0.0 | 0.0 | 0.0 | 0.17 | | 0.0/0.0/0.0 | seg4.0062;orfchr18.471050 |
| 47 | chr19:+1251K | 522 | 0.4/0.3 | -/- | 1.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | noaln/noaln | 0.7/0.6/0.0 | 0.0 | 105.0 | 0.0 | 0.0 | 0.54 | t | 1.0/0.0/0.0 | seg4.0066;orfchr19.502692 |
| 48 | chr19:+40049K | 393 | 1.0/0.4 | 1.0/0.4 | 0.8/0.0 | fsh,stop/fsh,stop | noaln/noaln | fsh/OK | 1.0/0.0/1.0 | 0.0 | 154.0 | 0.0 | 0.0 | 0.32 | | 0.0/1.0/0.0 | seg4.0072;orfchr19.529548 |
| 49 | chr19:+55954K | 735 | 0.9/0.6 | 0.8/0.7 | 1.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | noaln/noaln | 1.0/1.0/0.0 | 0.0 | 329.0 | 0.0 | 0.0 | 0.16 | | 0.0/0.0/0.0 | seg4.0079;orfchr19.542702 |
| 50 | chr19:-363K | 639 | 0.6/0.1 | -/- | 0.5/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.2/0.5/0.8 | 0.0 | 228.0 | 0.0 | 0.0 | 0.10 | | 0.0/1.0/0.0 | seg4.0070;orfchr19.501024 |
| 51 | chr19:-9822K | 456 | 0.4/0.3 | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh | fsh,stop/fsh,stop | 0.8/0.8/0.8 | 0.0 | 0.0 | 0.0 | 0.0 | 0.08 | t | 0.0/0.0/0.0 | seg4.0082;orfchr19.511951 |
| 52 | chr19:-22492K | 501 | 0.5/0.2 | -/- | 0.9/0.0 | noaln/noaln | noaln/noaln | fsh,stop/fsh,stop | 0.0/0.0/0.9 | 1.0 | 60.0 | 1.0 | 0.0 | 0.16 | x | 0.0/0.0/2.0 | seg4.0068;orfchr19.522928 |
| 53 | chr19:-38418K | 612 | 0.8/0.1 | -/- | 0.9/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.8/0.9/0.9 | 0.0 | 373.0 | 0.0 | 0.0 | 0.41 | | 0.0/0.0/0.0 | seg4.0071;orfchr19.527980 |
| 54 | chr19:-43067K | 1020 | 1.0/1.0 | -/- | 0.4/0.0 | OK/OK | noaln/noaln | OK/OK | 1.0/0.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.13 | ext | 0.0/0.0/0.0 | seg3.0064;orfchr19.531917 |
| 55 | chr19:-51623K | 615 | 0.7/0.4 | -/- | 0.2/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.23 | x | 0.0/0.0/8.0 | seg4.0074;orfchr19.539030 |
| 56 | chr2:+6045K | 423 | 0.4/0.1 | -/- | 1.0/0.0 | fsh/fsh,stop | fsh/fsh | noaln/noaln | 0.3/0.3/0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.15 | | 0.0/0.0/0.0 | seg4.0092;orfchr2.775801 |
| 57 | chr2:+74495K | 438 | 0.5/0.2 | -/- | 1.0/0.0 | fsh,stop/fsh,stop | stop,fsh/fsh,stop | fsh,stop/fsh,stop | 0.9/0.9/1.0 | 0.0 | 63.0 | 1.0 | 0.0 | 0.72 | xt | 0.0/0.0/2.0 | seg4.0093;orfchr2.809752 |
| 58 | chr2:+213405K | 1215 | 0.7/0.6 | 0.6/1.0 | 0.2/0.0 | fsh,stop/fsh | stop,fsh/fsh | fsh,stop/fsh,stop | 1.0/1.0/0.7 | 0.0 | 0.0 | 1.0 | 0.0 | 0.40 | s | 0.0/0.0/0.0 | seg4.0087;orfchr2.865989 |
| 59 | chr2:-74495K | 930 | 1.0/0.5 | -/- | 0.9/0.0 | fsh/fsh | fsh/fsh | fsh/fsh | 0.9/0.9/1.0 | 0.0 | 968.0 | 0.7 | 0.0 | 0.49 | xt | 3.0/3.0/4.0 | seg3.0069;orfchr2.809753 |
| No | Gene | Len. | Blast qCov/tCov | Domain qCov/tCov | EST all/spliced | Clean m full/part | Clean r full/part | Clean d full/part | Synteny m/r/d | Dupl. | Incompl. | CpG | OR | lr prob. | Ensemble/nscan/sgp/ eXoniphy/transmap | PET/SAGE/CAGE | id |
| 60 | chr2:-88084K | 750 | 1.0/1.0 | -/- | 0.0/0.0 | fsh/fsh | fsh/fsh | fsh/fsh | 0.8/0.7/1.0 | 0.0 | 159.0 | 0.0 | 0.0 | 0.15 | t | 0.0/0.0/1.0 | seg2.0071;orfchr2.809355 |
| 61 | chr20:+1806K | 360 | 0.7/0.1 | -/- | 1.0/0.0 | fsh/fsh | fsh,stop/fsh | fsh/fsh | 0.9/0.9/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.36 | | 0.0/0.0/0.0 | seg4.0094;orfchr20.674798 |
| 62 | chr20:+4750K | 540 | 0.4/0.0 | -/- | 0.6/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh | 0.8/0.7/0.9 | 0.0 | 81.0 | 0.0 | 0.0 | 0.26 | | 0.0/0.0/1.0 | seg4.0097;orfchr20.676897 |
| 63 | chr20:+31191K | 783 | 1.0/0.5 | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh/fsh,stop | 0.4/0.5/1.0 | 0.0 | 1437.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | seg2.0072;orfchr20.684854 |
| 64 | chr20:+42528K | 597 | 0.7/0.4 | -/- | 1.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.5/0.8/0.9 | 0.0 | 84.0 | 0.0 | 0.0 | 0.67 | e | 0.0/0.0/0.0 | seg4.0096;orfchr20.696083 |
| 65 | chr21:+44453K | 378 | 0.8/0.4 | -/- | 1.0/0.0 | noaln/noaln | fsh,stop/fsh,stop | fsh/fsh | 0.0/0.9/0.3 | 0.0 | 165.0 | 0.0 | 0.0 | 0.08 | | 0.0/0.0/0.0 | seg4.0103;orfchr21.728381 |
| 66 | chr21:-34694K | 756 | 1.0/1.0 | -/- | 0.6/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.20 | sxt | 0.0/0.0/0.0 | seg1.0003;chr21.723.9 |
| 67 | chr21:-38499K | 396 | 0.6/0.1 | -/- | 1.0/0.0 | noaln/noaln | noaln/noaln | fsh/fsh | 0.0/0.0/1.0 | 0.0 | 474.0 | 0.0 | 0.0 | 0.23 | | 0.0/0.0/0.0 | seg4.0102;orfchr21.722390 |
| 68 | chr22:+40697K | 1686 | 0.4/0.6 | -/- | 0.2/0.0 | fsh,stop/fsh | fsh,stop/fsh | fsh,stop/fsh | 0.9/0.9/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.65 | | 0.0/0.0/0.0 | seg4.0107;orfchr22.757002 |
| 69 | chr22:-39378K | 567 | 0.7/0.1 | -/- | 0.5/0.0 | fsh,stop/fsh,stop | noaln/noaln | fsh,stop/fsh,stop | 0.6/0.0/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.13 | | 0.0/0.0/0.0 | seg4.0105;orfchr22.756020 |
| 70 | chr3:+99440K | 756 | 1.0/0.8 | 0.9/0.9 | 0.1/0.0 | stop,fsh/stop,fsh | OK/OK | OK/OK | 1.0/1.0/1.0 | 1.0 | 222.0 | 0.0 | 1.0 | 0.07 | xt | 0.0/0.0/0.0 | seg2.0077;orfchr3.924598 |
| 71 | chr3:+157237K | 756 | 1.0/0.3 | 0.8/0.8 | 0.0/0.0 | stop,fsh/OK | stop,fsh/OK | stop,fsh/stop,fsh | 1.0/1.0/1.0 | 0.0 | 297.0 | 0.0 | 0.0 | 0.21 | xt | 0.0/0.0/0.0 | seg4.0118;orfchr3.954104 |
| 72 | chr3:-49886K | 702 | 1.0/0.2 | 1.0/0.7 | 1.0/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 999.0 | 0.0 | 0.0 | 0.04 | xt | 0.0/0.0/2.0 | seg2.0075;orfchr3.907154 |
| 73 | chr3:-49887K | 417 | 1.0/0.1 | 0.5/0.2 | 0.6/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 1815.0 | 0.0 | 0.0 | 0.01 | xt | 0.0/0.0/0.0 | seg2.0076;orfchr3.907158 |
| 74 | chr3:-160041K | 1086 | 0.5/0.5 | 0.4/0.6 | 0.0/0.0 | stop,fsh/fsh | stop,fsh/fsh | stop,fsh/fsh | 1.0/1.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.37 | ex | 0.0/0.0/0.0 | seg3.0071;orfchr3.955151 |
| 75 | chr3:-185700K | 588 | 0.4/0.3 | 0.4/0.5 | 0.4/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | stop,fsh/stop,fsh | 0.9/0.9/1.0 | 0.0 | 435.0 | 0.0 | 0.0 | 0.40 | xt | 0.0/0.0/0.0 | seg4.0120;orfchr3.962410 |
| 76 | chr4:-184480K | 663 | 0.7/0.7 | 0.8/1.0 | 0.0/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.63 | xt | 0.0/0.0/0.0 | seg3.0075;orfchr4.1027224 |
| 77 | chr5:-54202K | 564 | 1.0/0.2 | -/- | 0.0/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 1689.0 | 0.0 | 0.0 | 0.00 | x | 0.0/0.0/0.0 | seg4.0137;orfchr5.1054736 |
| 78 | chr5:-66389K | 486 | 0.5/0.2 | -/- | 1.0/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | stop,fsh/stop,fsh | 0.9/0.9/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.68 | | 0.0/0.0/0.0 | seg4.0138;orfchr5.1058756 |
| 79 | chr5:-157050K | 405 | 0.4/0.1 | -/- | 1.0/0.0 | fsh/fsh | OK/OK | stop,fsh/stop,fsh | 1.0/0.4/0.7 | 1.0 | 545.0 | 1.0 | 0.0 | 0.08 | x | 0.0/0.0/0.0 | seg4.0132;orfchr5.1092758 |
| No | Gene | Len. | Blast qCov/tCov | Domain qCov/tCov | EST all/spliced | Clean m full/part | Clean r full/part | Clean d full/part | Synteny m/r/d | Dupl. | Incompl. | CpG | OR | lr prob. | Ensemble/nscan/sgp/ eXoniphy/transmap | PET/SAGE/CAGE | id |
| 80 | chr6:+303K | 429 | 0.8/0.2 | -/- | 1.0/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | noaln/noaln | 0.7/0.7/0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.22 | | 0.0/0.0/3.0 | seg4.0143;orfchr6.1111218 |
| 81 | chr6:+34621K | 423 | 0.9/0.1 | -/- | 0.5/0.0 | noaln/noaln | noaln/noaln | stop,fsh/stop,fsh | 0.0/0.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.08 | | 0.0/0.0/0.0 | seg4.0144;orfchr6.1131092 |
| 82 | chr6:-1549K | 1284 | 0.3/0.3 | -/- | 0.4/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | stop,fsh/fsh | 0.9/0.9/0.6 | 0.0 | 0.0 | 0.9 | 0.0 | 0.38 | | 0.0/0.0/4.0 | seg4.0140;orfchr6.1112282 |
| 83 | chr6:-156423K | 684 | -/- | 0.6/0.1 | 0.0/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | stop,fsh/stop,fsh | 0.8/0.8/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.07 | | 0.0/0.0/0.0 | seg4.0141;orfchr6.1172339 |
| 84 | chr8:+145175K | 603 | 0.5/0.1 | -/- | 0.2/0.0 | stop,fsh/stop,fsh | noaln/noaln | stop,fsh/stop,fsh | 0.8/0.0/0.9 | 0.0 | 0.0 | 0.1 | 0.0 | 0.10 | | 0.0/0.0/2.0 | seg4.0154;orfchr8.1330314 |
| 85 | chr9:+124917K | 522 | 0.6/0.2 | -/- | 1.0/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | stop,fsh/stop,fsh | 0.6/0.6/0.8 | 0.0 | 156.0 | 0.0 | 0.0 | 0.12 | | 0.0/1.0/0.0 | seg4.0157;orfchr9.1377884 |
| 86 | chr9:+132248K | 537 | -/- | 0.4/0.9 | 0.0/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | fsh/fsh | 0.9/0.8/0.7 | 0.0 | 0.0 | 0.0 | 0.0 | 0.13 | x | 0.0/0.0/0.0 | seg4.0161;orfchr9.1383753 |
| 87 | chr9:+138671K | 954 | 0.7/0.7 | -/- | 0.0/0.0 | stop,fsh/noaln | stop,fsh/noaln | stop,fsh/stop,fsh | 0.1/0.1/0.6 | 0.0 | 845.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/1.0 | seg3.0083;orfchr9.1393979 |
| 88 | chr9:-34713K | 423 | 1.0/0.3 | -/- | 1.0/0.0 | OK/OK | stop/OK | OK/OK | 1.0/0.9/1.0 | 1.0 | 96.0 | 0.0 | 0.0 | 0.42 | x | 0.0/0.0/0.0 | seg4.0164;orfchr9.1344381 |
| 89 | chr9:-138285K | 750 | 0.6/0.3 | -/- | 0.0/0.0 | stop,fsh/OK | stop,fsh/OK | fsh/OK | 0.9/0.9/1.0 | 0.0 | 255.0 | 0.0 | 0.0 | 0.13 | | 0.0/0.0/0.0 | seg4.0162;orfchr9.1392855 |
| 90 | chrX:+9895K | 645 | 0.9/0.9 | -/- | 0.7/0.0 | noaln/noaln | noaln/noaln | OK/OK | 0.0/0.0/1.0 | 0.0 | 6.0 | 0.0 | 0.0 | 0.09 | | 0.0/0.0/0.0 | seg2.0087;orfchrX.1384884 |
| 91 | chrX:+83859K | 465 | 1.0/0.1 | -/- | 0.0/0.0 | fsh/fsh | noaln/noaln | OK/OK | 1.0/1.0/1.0 | 0.0 | 552.0 | 0.0 | 0.0 | 0.02 | t | 0.0/0.0/0.0 | seg4.0171;orfchrX.1425470 |
| 92 | chrX:+107104K | 414 | 0.9/0.2 | 0.4/0.3 | 0.0/0.0 | noaln/noaln | noaln/noaln | fsh/OK | 0.0/0.0/1.0 | 0.0 | 998.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | seg4.0166;orfchrX.1430623 |
| 93 | chrX:+107105K | 486 | 0.8/0.1 | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | OK/OK | 0.0/0.0/1.0 | 0.0 | 1188.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | seg4.0167;orfchrX.1430626 |
| 94 | chrX:+124284K | 1074 | 0.8/0.7 | -/- | 0.0/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | OK/OK | 0.9/0.9/0.3 | 0.0 | 987.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | seg2.0084;orfchrX.1417954 |