| No | Gene | Len. | Blast qCov/tCov | Domain qCov/tCov | EST all/spliced | Clean m full/part | Clean r full/part | Clean d full/part | Synteny m/r/d | Dupl. | Incompl. | CpG | OR | lr prob. | Ensemble/nscan/sgp/ eXoniphy/transmap | PET/SAGE/CAGE | id |
| 1 | chr11:-5945K | 819 | 1.0/0.7 | 0.9/1.0 | 0.0/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 138.0 | 0.0 | 1.0 | 0.40 | xt | 0.0/0.0/0.0 | seg2.0050;orfchr11.85139 |
| 2 | chr11:-123370K | 999 | 0.9/1.0 | 0.7/1.0 | 0.0/0.0 | fsh,stop/OK | fsh,stop/OK | OK/OK | 1.0/0.5/1.0 | 0.0 | 0.0 | 0.0 | 0.9 | 0.38 | esxt | 0.0/0.0/0.0 | seg2.0011;orfchr11.144460 |
| 3 | chr15:+38850K | 528 | 1.0/1.0 | -/- | 1.0/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.91 | sxt | 0.0/0.0/5.0 | seg2.0064;orfchr15.307805 |
| 4 | chr17:-34083K | 1140 | 1.0/1.0 | 0.3/0.3 | 0.8/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 151.0 | 0.9 | 0.0 | 1.00 | ensxt | 0.0/1.0/24.0 | seg1.0004;chr17.35.001.a |
| 5 | chr19:-43067K | 1020 | 1.0/1.0 | -/- | 0.4/0.0 | OK/OK | noaln/noaln | OK/OK | 1.0/0.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.13 | ext | 0.0/0.0/0.0 | seg3.0064;orfchr19.531917 |
| 6 | chr21:-34694K | 756 | 1.0/1.0 | -/- | 0.6/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.20 | sxt | 0.0/0.0/0.0 | seg1.0003;chr21.723.9 |
| 7 | chrX:+9895K | 645 | 0.9/0.9 | -/- | 0.7/0.0 | noaln/noaln | noaln/noaln | OK/OK | 0.0/0.0/1.0 | 0.0 | 6.0 | 0.0 | 0.0 | 0.09 | | 0.0/0.0/0.0 | seg2.0087;orfchrX.1384884 |
| 8 | chrX:+124284K | 1074 | 0.8/0.7 | -/- | 0.0/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | OK/OK | 0.9/0.9/0.3 | 0.0 | 987.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | seg2.0084;orfchrX.1417954 |