List of clusters
| No | Gene | Len. | Blast qCov/tCov | Domain qCov/tCov | EST all/spliced | Clean m full/part | Clean r full/part | Clean d full/part | Synteny m/r/d | Dupl. | Incompl. | CpG | OR | lr prob. | Ensemble/nscan/sgp/ eXoniphy/transmap | PET/SAGE/CAGE | id |
| 1 | chr1:+23870K | 441 | 0.7/0.2 | 0.7/0.5 | 0.0/0.0 | noaln/noaln | noaln/noaln | fsh,stop/fsh,stop | 0.0/0.0/1.0 | 0.0 | 177.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr1.576438 |
| 2 | chr1:+34078K | 255 | 0.5/0.1 | 0.4/0.1 | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.8/0.8/0.6 | 0.0 | 954.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr1.582937 |
| 3 | chr1:+62427K | 267 | 1.0/0.7 | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | fsh,stop/fsh,stop | 0.0/0.0/0.9 | 0.0 | 169.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr1.598624 |
| 4 | chr1:+63500K | 309 | 0.6/0.2 | 0.5/0.2 | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh/fsh | 0.9/0.6/0.4 | 0.0 | 286.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr1.598945 |
| 5 | chr1:+92304K | 567 | 0.9/0.3 | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.9/1.0/1.0 | 0.0 | 967.0 | 0.0 | 0.0 | 0.02 | t | 0.0/0.0/0.0 | orfchr1.607401 |
| 6 | chr1:+92305K | 504 | 0.9/0.3 | -/- | 0.0/0.0 | fsh/fsh | fsh/fsh | fsh,stop/fsh,stop | 1.0/1.0/1.0 | 0.0 | 952.0 | 0.0 | 0.0 | 0.01 | t | 0.0/0.0/0.0 | orfchr1.607405 |
| 7 | chr1:+106042K | 246 | 1.0/0.2 | 0.7/0.2 | 0.0/0.0 | noaln/noaln | noaln/noaln | fsh/fsh | 0.0/0.0/0.1 | 0.0 | 27.0 | 0.0 | 0.0 | 0.00 | s | 0.0/0.0/0.0 | orfchr1.610849 |
| 8 | chr1:+119890K | 396 | 0.4/0.2 | 0.4/0.2 | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 1.0/0.8/1.0 | 0.0 | 464.0 | 0.0 | 0.0 | 0.04 | t | 0.0/0.0/0.0 | orfchr1.617834 |
| 9 | chr1:+157115K | 267 | 1.0/0.2 | 1.0/1.0 | 0.0/0.0 | fsh/fsh | fsh/fsh | fsh/fsh | 1.0/0.9/1.0 | 0.0 | 87.0 | 0.0 | 0.0 | 0.16 | t | 0.0/0.0/0.0 | orfchr1.628974 |
| 10 | chr1:+157513K | 414 | 1.0/0.6 | 1.0/0.7 | 0.0/0.0 | fsh/fsh | noaln/noaln | fsh,stop/fsh | 1.0/0.0/0.9 | 0.0 | 219.0 | 0.0 | 0.0 | 0.08 | t | 0.0/0.0/0.0 | orfchr1.629162 |
| 11 | chr1:+157669K | 726 | 0.8/0.6 | 0.5/0.5 | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.9/0.9/1.0 | 0.0 | 290.0 | 0.0 | 0.9 | 0.03 | x | 0.0/0.0/0.0 | orfchr1.629221 |
| 12 | chr1:+164809K | 243 | 0.7/0.1 | 0.7/0.1 | 0.0/0.0 | fsh,stop/fsh,stop | fsh/fsh | fsh,stop/fsh,stop | 0.9/0.9/1.0 | 0.0 | 366.0 | 0.0 | 0.0 | 0.01 | t | 0.0/0.0/0.0 | orfchr1.633136 |
| 13 | chr1:+164816K | 246 | 0.9/0.1 | 1.0/0.1 | 0.0/0.0 | fsh/OK | fsh/OK | fsh/OK | 1.0/1.0/1.0 | 0.0 | 51.0 | 0.0 | 0.0 | 0.17 | xt | 0.0/0.0/0.0 | orfchr1.633140 |
| 14 | chr1:+164905K | 270 | 0.6/0.1 | 0.6/0.1 | 0.0/0.0 | fsh/fsh | fsh/fsh | noaln/noaln | 0.9/0.9/0.0 | 0.0 | 318.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/1.0 | orfchr1.633172 |
| 15 | chr1:+164911K | 294 | 0.9/0.2 | 0.9/0.2 | 0.0/0.0 | fsh/OK | fsh/OK | noaln/noaln | 0.9/0.9/0.0 | 0.0 | 85.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr1.633180 |
| 16 | chr1:+181502K | 258 | 1.0/0.3 | 1.0/0.4 | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | noaln/noaln | 0.9/0.8/0.0 | 0.0 | 348.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr1.640614 |
| 17 | chr1:+205414K | 300 | 0.6/0.2 | 0.6/1.0 | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | noaln/noaln | 1.0/1.0/0.0 | 0.0 | 24.0 | 0.0 | 0.0 | 0.03 | t | 0.0/0.0/0.0 | orfchr1.650959 |
| 18 | chr1:+240188K | 1296 | 1.0/1.0 | 0.8/1.0 | 0.0/0.0 | fsh,stop/fsh | fsh/fsh,stop | fsh/fsh | 1.0/0.9/1.0 | 0.0 | 9.0 | 0.0 | 0.0 | 0.21 | x | 0.0/0.0/0.0 | orfchr1.668968 |
| 19 | chr1:-68753K | 291 | 0.5/0.4 | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | fsh,stop/fsh | 0.0/0.0/0.2 | 0.0 | 130.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr1.600668 |
| No | Gene | Len. | Blast qCov/tCov | Domain qCov/tCov | EST all/spliced | Clean m full/part | Clean r full/part | Clean d full/part | Synteny m/r/d | Dupl. | Incompl. | CpG | OR | lr prob. | Ensemble/nscan/sgp/ eXoniphy/transmap | PET/SAGE/CAGE | id |
| 20 | chr1:-111735K | 303 | 0.5/0.1 | 0.6/0.1 | 0.0/0.0 | noaln/noaln | noaln/noaln | fsh,stop/fsh,stop | 0.0/0.0/0.9 | 0.0 | 60.0 | 0.0 | 0.0 | 0.01 | t | 0.0/0.0/0.0 | orfchr1.613868 |
| 21 | chr1:-155961K | 432 | 0.8/0.4 | 0.7/0.4 | 0.0/0.0 | noaln/noaln | noaln/noaln | fsh,stop/fsh,stop | 0.0/0.0/1.0 | 0.0 | 374.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr1.628262 |
| 22 | chr1:-156681K | 357 | 0.8/0.3 | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | OK/OK | 0.0/0.0/1.0 | 0.0 | 588.0 | 0.0 | 1.0 | 0.00 | x | 0.0/0.0/0.0 | orfchr1.628685 |
| 23 | chr1:-157045K | 330 | 0.9/0.3 | -/- | 0.0/0.0 | fsh/OK | fsh/OK | fsh/OK | 1.0/1.0/1.0 | 0.0 | 604.0 | 0.0 | 0.9 | 0.11 | xt | 0.0/0.0/0.0 | orfchr1.628951 |
| 24 | chr1:-157516K | 216 | 0.8/0.2 | -/- | 0.0/0.0 | fsh/fsh | noaln/noaln | fsh/fsh | 1.0/0.0/1.0 | 0.0 | 848.0 | 0.0 | 0.7 | 0.00 | | 0.0/0.0/0.0 | orfchr1.629168 |
| 25 | chr1:-157942K | 201 | 0.9/0.3 | 0.9/0.3 | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh/fsh | 0.9/0.9/0.9 | 0.0 | 455.0 | 0.0 | 0.0 | 0.01 | s | 0.0/0.0/0.0 | orfchr1.629346 |
| 26 | chr1:-183307K | 234 | 0.9/0.4 | 0.9/0.4 | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | noaln/noaln | 0.7/0.7/0.0 | 0.0 | 291.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr1.641416 |
| 27 | chr10:+44623K | 303 | 0.5/0.1 | 0.6/0.1 | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh | 0.9/1.0/1.0 | 0.0 | 1463.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr10.21007 |
| 28 | chr10:+44623K | 231 | 1.0/0.1 | -/- | 0.0/0.0 | fsh,stop/fsh,stop | stop,fsh/fsh,stop | fsh,stop/fsh,stop | 0.8/0.7/1.0 | 0.0 | 1247.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr10.21010 |
| 29 | chr10:+45074K | 249 | 1.0/0.3 | 1.0/0.3 | 0.0/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 786.0 | 0.0 | 1.0 | 0.03 | xt | 0.0/0.0/0.0 | orfchr10.21436 |
| 30 | chr10:+45074K | 528 | 1.0/0.6 | -/- | 0.0/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 432.0 | 0.0 | 1.0 | 0.05 | sxt | 0.0/0.0/0.0 | orfchr10.21439 |
| 31 | chr10:+124499K | 441 | 0.9/0.4 | 0.2/0.3 | 0.0/0.0 | fsh,stop/fsh,stop | fsh/fsh | fsh,stop/fsh | 0.8/0.8/0.9 | 0.0 | 21.0 | 0.0 | 0.0 | 0.06 | x | 0.0/0.0/0.0 | orfchr10.61497 |
| 32 | chr10:-59536K | 387 | 0.4/0.2 | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | fsh,stop/fsh,stop | 0.0/0.0/1.0 | 0.0 | 172.0 | 0.2 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr10.27902 |
| 33 | chr10:-65333K | 507 | 0.5/0.3 | -/- | 0.9/0.0 | fsh/noaln | fsh,stop/OK | fsh/fsh | 0.0/0.1/0.1 | 0.0 | 493.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr10.29942 |
| 34 | chr10:-96616K | 210 | 0.6/0.1 | -/- | 0.0/0.0 | fsh,stop/fsh,stop | noaln/noaln | noaln/noaln | 0.9/0.0/0.8 | 0.0 | 157.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr10.45843 |
| 35 | chr10:-114104K | 306 | 1.0/0.1 | -/- | 0.0/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 38.0 | 0.0 | 0.0 | 0.02 | t | 0.0/0.0/0.0 | orfchr10.54981 |
| 36 | chr11:+4810K | 492 | 0.9/0.5 | 0.7/0.5 | 0.0/0.0 | fsh/OK | fsh,stop/fsh | fsh/OK | 1.0/1.0/1.0 | 0.0 | 451.0 | 0.0 | 0.9 | 0.10 | t | 0.0/0.0/0.0 | orfchr11.83797 |
| 37 | chr11:+4993K | 384 | 1.0/0.4 | 0.7/0.3 | 0.0/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 594.0 | 0.0 | 1.0 | 0.06 | xt | 0.0/0.0/0.0 | orfchr11.83976 |
| 38 | chr11:+4994K | 339 | 0.8/0.3 | -/- | 0.0/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 603.0 | 0.0 | 1.0 | 0.04 | xt | 0.0/0.0/0.0 | orfchr11.83978 |
| 39 | chr11:-4915K | 282 | 1.0/0.3 | -/- | 0.0/0.0 | fsh/OK | fsh,stop/fsh,stop | fsh/OK | 1.0/1.0/1.0 | 0.0 | 663.0 | 0.0 | 1.0 | 0.01 | | 0.0/0.0/0.0 | orfchr11.83910 |
| No | Gene | Len. | Blast qCov/tCov | Domain qCov/tCov | EST all/spliced | Clean m full/part | Clean r full/part | Clean d full/part | Synteny m/r/d | Dupl. | Incompl. | CpG | OR | lr prob. | Ensemble/nscan/sgp/ eXoniphy/transmap | PET/SAGE/CAGE | id |
| 40 | chr13:+36213K | 345 | 0.5/0.3 | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | stop,fsh/fsh,stop | 0.0/0.0/1.0 | 0.0 | 481.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr13.221094 |
| 41 | chr13:+52674K | 207 | 0.9/0.1 | 1.0/0.3 | 1.0/0.0 | noaln/noaln | noaln/noaln | fsh/fsh | 0.0/0.0/0.7 | 0.0 | 1236.0 | 1.0 | 0.0 | 0.08 | t | 0.0/0.0/0.0 | orfchr13.227682 |
| 42 | chr13:+74608K | 285 | 0.9/0.3 | 0.9/0.3 | 0.0/0.0 | noaln/noaln | noaln/noaln | fsh,stop/fsh,stop | 0.0/0.0/0.7 | 0.0 | 384.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr13.232386 |
| 43 | chr13:-18626K | 300 | 0.6/0.1 | -/- | 0.0/0.0 | stop,fsh/fsh | stop,fsh/fsh | fsh/fsh | 0.7/0.7/0.8 | 0.0 | 1013.0 | 0.0 | 0.0 | 0.00 | x | 0.0/0.0/1.0 | orfchr13.212609 |
| 44 | chr13:-98858K | 219 | 0.8/0.2 | -/- | 0.0/0.0 | noaln/noaln | stop,fsh/fsh | stop,fsh/stop,fsh | 0.0/0.9/1.0 | 0.0 | 644.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr13.238902 |
| 45 | chr18:+46604K | 216 | 0.6/0.2 | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | noaln/noaln | 0.8/1.0/0.0 | 0.0 | 264.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr18.485659 |
| 46 | chr19:+59725K | 303 | 0.5/0.1 | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | fsh,stop/fsh,stop | 0.0/0.0/0.6 | 0.0 | 168.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr19.545667 |
| 47 | chr19:+59875K | 267 | 1.0/0.3 | -/- | 0.0/0.0 | fsh/fsh | noaln/noaln | fsh,stop/fsh,stop | 1.0/0.0/1.0 | 0.0 | 1086.0 | 0.0 | 0.0 | 0.01 | t | 0.0/0.0/0.0 | orfchr19.545807 |
| 48 | chr20:+54277K | 228 | 1.0/0.6 | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | noaln/noaln | 0.9/0.9/0.0 | 0.0 | 425.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr20.701814 |
| 49 | chr20:+60581K | 207 | 0.5/0.1 | -/- | 0.4/0.0 | fsh,stop/fsh,stop | noaln/noaln | noaln/noaln | 0.9/0.0/0.0 | 0.0 | 546.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/1.0 | orfchr20.708881 |
| 50 | chr20:-1605K | 213 | 1.0/0.1 | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | OK/OK | 0.0/0.0/1.0 | 0.0 | 33.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr20.674696 |
| 51 | chr20:-16515K | 456 | 1.0/0.5 | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | fsh,stop/fsh,stop | 0.0/0.0/0.9 | 0.0 | 3.0 | 0.0 | 0.0 | 0.01 | s | 0.0/0.0/0.0 | orfchr20.681295 |
| 52 | chr20:-18712K | 285 | 0.6/0.1 | 0.6/0.3 | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | noaln/noaln | 0.8/0.5/0.0 | 0.0 | 889.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/1.0 | orfchr20.682487 |
| 53 | chr20:-22892K | 246 | 0.8/0.0 | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | fsh,stop/fsh,stop | 0.0/0.0/0.9 | 0.0 | 728.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr20.685087 |
| 54 | chr20:-42529K | 240 | 0.6/0.5 | 0.6/0.5 | 0.7/0.0 | fsh,stop/fsh | fsh,stop/fsh | fsh,stop/fsh | 0.3/0.3/0.2 | 0.0 | 126.0 | 0.0 | 0.0 | 0.04 | | 0.0/0.0/0.0 | orfchr20.696087 |
| 55 | chr20:-56774K | 273 | 0.9/0.0 | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.9/0.9/1.0 | 0.0 | 15.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr20.703952 |
| 56 | chr20:-56791K | 201 | 0.7/0.0 | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh/fsh | fsh,stop/fsh,stop | 1.0/1.0/1.0 | 0.0 | 150.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr20.703970 |
| 57 | chr6:+35522K | 429 | 0.3/0.1 | -/- | 0.0/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | noaln/noaln | 0.5/0.3/0.0 | 0.0 | 9.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr6.1131707 |
| 58 | chr6:-132958K | 408 | 1.0/0.4 | 0.6/0.3 | 0.0/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 595.0 | 0.0 | 0.7 | 0.02 | xt | 0.0/0.0/0.0 | orfchr6.1163617 |
| 59 | chr6:-132971K | 816 | 1.0/0.8 | 0.9/0.9 | 1.0/0.0 | OK/OK | OK/OK | stop,fsh/stop,fsh | 1.0/1.0/1.0 | 0.0 | 214.0 | 0.0 | 0.4 | 0.86 | xt | 0.0/0.0/0.0 | orfchr6.1163630 |
| No | Gene | Len. | Blast qCov/tCov | Domain qCov/tCov | EST all/spliced | Clean m full/part | Clean r full/part | Clean d full/part | Synteny m/r/d | Dupl. | Incompl. | CpG | OR | lr prob. | Ensemble/nscan/sgp/ eXoniphy/transmap | PET/SAGE/CAGE | id |
| 60 | chr9:+1319K | 261 | 0.6/0.5 | 0.6/1.0 | 0.0/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | stop,fsh/stop,fsh | 0.9/0.8/0.9 | 0.0 | 138.0 | 0.0 | 0.0 | 0.04 | | 0.0/0.0/0.0 | orfchr9.1333222 |
| 61 | chr9:+36004K | 363 | 1.0/0.4 | 0.8/0.4 | 0.0/0.0 | OK/OK | OK/OK | stop/OK | 1.0/1.0/1.0 | 0.0 | 570.0 | 0.0 | 1.0 | 0.17 | xt | 0.0/0.0/0.0 | orfchr9.1345602 |
| 62 | chr9:+83775K | 288 | 0.9/0.1 | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | OK/OK | 0.0/0.0/1.0 | 0.0 | 1930.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr9.1356721 |
| 63 | chr9:+83776K | 426 | 0.7/0.1 | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | fsh/fsh | 0.0/0.0/0.9 | 0.0 | 123.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr9.1356727 |
| 64 | chr9:+106078K | 543 | 0.9/0.2 | -/- | 0.0/0.0 | fsh/OK | fsh/OK | fsh/OK | 1.0/1.0/1.0 | 0.0 | 1622.0 | 0.0 | 0.0 | 0.01 | xt | 0.0/0.0/0.0 | orfchr9.1369074 |
| 65 | chr9:+106079K | 687 | 0.8/0.3 | -/- | 0.0/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | fsh/fsh | 1.0/0.9/1.0 | 0.0 | 1101.0 | 0.0 | 0.0 | 0.02 | t | 0.0/0.0/1.0 | orfchr9.1369076 |
| 66 | chr9:+106393K | 342 | 1.0/0.4 | 0.8/0.4 | 0.0/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | OK/OK | 0.9/0.9/1.0 | 0.0 | 595.0 | 0.0 | 1.0 | 0.00 | | 0.0/0.0/0.0 | orfchr9.1369217 |
| 67 | chr9:+106525K | 582 | 0.9/0.5 | 0.9/0.7 | 0.0/0.0 | fsh/OK | fsh/OK | fsh/OK | 1.0/1.0/1.0 | 0.0 | 418.0 | 0.0 | 0.9 | 0.16 | x | 0.0/0.0/0.0 | orfchr9.1369299 |
| 68 | chr9:-82162K | 378 | 0.4/0.0 | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | stop,fsh/stop,fsh | 0.0/0.0/1.0 | 0.0 | 1382.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr9.1356156 |
| 69 | chr9:-106459K | 531 | 1.0/0.6 | 0.9/0.6 | 0.0/0.0 | noaln/noaln | noaln/noaln | OK/OK | 0.0/0.0/1.0 | 0.0 | 423.0 | 0.0 | 1.0 | 0.01 | s | 0.0/0.0/1.0 | orfchr9.1369268 |
| 70 | chrX:+17862K | 417 | 0.9/0.2 | -/- | 0.0/0.0 | fsh/fsh | stop,fsh/stop,fsh | stop,fsh/stop,fsh | 0.7/0.7/1.0 | 0.0 | 817.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchrX.1406114 |
| 71 | chrX:+27760K | 432 | 1.0/0.4 | 0.9/0.6 | 0.0/0.0 | stop,fsh/stop,fsh | noaln/noaln | fsh/fsh | 0.9/0.0/1.0 | 0.0 | 518.0 | 0.0 | 0.0 | 0.07 | t | 0.0/0.0/1.0 | orfchrX.1409138 |
| 72 | chrX:+27761K | 429 | 0.8/0.3 | 0.2/0.1 | 0.0/0.0 | stop,fsh/stop,fsh | noaln/noaln | fsh/OK | 1.0/0.0/1.0 | 0.0 | 605.0 | 0.0 | 0.0 | 0.04 | t | 0.0/0.0/0.0 | orfchrX.1409141 |
| 73 | chrX:+27783K | 285 | 1.0/0.2 | 0.8/0.3 | 0.0/0.0 | fsh/OK | fsh/OK | fsh/OK | 1.0/1.0/1.0 | 0.0 | 704.0 | 0.0 | 0.0 | 0.02 | | 0.0/0.0/0.0 | orfchrX.1409155 |
| 74 | chrX:+33340K | 381 | 1.0/0.3 | 1.0/0.3 | 0.0/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | stop,fsh/stop,fsh | 0.9/0.9/1.0 | 0.0 | 849.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchrX.1410578 |
| 75 | chrX:+34075K | 405 | 0.9/0.7 | 0.9/0.7 | 1.0/0.0 | noaln/noaln | noaln/noaln | fsh/fsh | 0.0/0.0/1.0 | 0.0 | 136.0 | 0.3 | 0.0 | 0.63 | x | 0.0/0.0/0.0 | orfchrX.1410678 |
| 76 | chrX:+34316K | 315 | 0.8/0.4 | 0.8/0.3 | 0.0/0.0 | fsh/fsh | fsh/fsh | stop,fsh/stop,fsh | 1.0/1.0/1.0 | 0.0 | 140.0 | 0.8 | 0.0 | 0.15 | st | 0.0/0.0/0.0 | orfchrX.1410734 |
| 77 | chrX:+34987K | 417 | 1.0/0.3 | 0.5/0.3 | 0.0/0.0 | noaln/noaln | noaln/noaln | fsh/OK | 0.0/0.0/1.0 | 0.0 | 460.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchrX.1410893 |
| 78 | chrX:+35639K | 366 | 1.0/0.3 | 0.8/0.4 | 0.0/0.0 | noaln/noaln | OK/OK | noaln/noaln | 0.0/1.0/0.0 | 0.0 | 335.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchrX.1410999 |
| 79 | chrX:+45476K | 390 | 1.0/0.4 | 0.7/0.4 | 1.0/0.0 | stop/stop | OK/OK | noaln/noaln | 1.0/1.0/0.0 | 0.0 | 470.0 | 0.0 | 0.0 | 0.10 | st | 0.0/0.0/0.0 | orfchrX.1414732 |
| No | Gene | Len. | Blast qCov/tCov | Domain qCov/tCov | EST all/spliced | Clean m full/part | Clean r full/part | Clean d full/part | Synteny m/r/d | Dupl. | Incompl. | CpG | OR | lr prob. | Ensemble/nscan/sgp/ eXoniphy/transmap | PET/SAGE/CAGE | id |
| 80 | chrX:+53369K | 201 | 1.0/0.2 | -/- | 0.0/0.0 | stop,fsh/stop,fsh | noaln/noaln | fsh/fsh | 0.9/0.0/1.0 | 0.0 | 667.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchrX.1418737 |
| 81 | chrX:+80505K | 315 | 0.8/0.3 | -/- | 0.0/0.0 | fsh/fsh | fsh/fsh | noaln/noaln | 1.0/1.0/0.0 | 0.0 | 596.0 | 0.0 | 0.0 | 0.00 | t | 0.0/0.0/0.0 | orfchrX.1425180 |
| 82 | chrX:+108472K | 513 | 0.7/0.3 | 0.7/0.7 | 0.0/0.0 | noaln/noaln | noaln/noaln | stop,fsh/stop,fsh | 0.0/0.0/1.0 | 0.0 | 351.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchrX.1431007 |
| 83 | chrX:+122727K | 258 | 0.3/0.1 | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | stop,fsh/stop,fsh | 0.0/0.0/1.0 | 0.0 | 149.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/1.0 | orfchrX.1435130 |
| 84 | chrX:+139002K | 576 | 1.0/0.7 | -/- | 0.7/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 246.0 | 0.0 | 0.0 | 0.26 | x | 1.0/5.0/7.0 | orfchrX.1440801 |
| 85 | chrX:+151949K | 225 | 1.0/0.2 | -/- | 0.0/0.0 | fsh/fsh | noaln/noaln | OK/OK | 0.3/0.0/0.9 | 0.0 | 722.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchrX.1444986 |
| 86 | chrX:+154021K | 234 | 0.6/0.1 | 0.6/0.4 | 0.0/0.0 | fsh/fsh | noaln/noaln | stop,fsh/fsh | 0.9/0.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.03 | x | 0.0/0.0/0.0 | orfchrX.1448088 |
| 87 | chrX:-38229K | 255 | 1.0/0.5 | 0.9/0.5 | 0.0/0.0 | stop,fsh/stop,fsh | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 249.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchrX.1411929 |
| 88 | chrX:-57113K | 285 | 0.5/0.2 | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | stop,fsh/fsh | 0.0/0.0/1.0 | 0.0 | 595.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchrX.1419957 |
| 89 | chrX:-97118K | 207 | 0.9/0.1 | -/- | 0.0/0.0 | stop,fsh/stop,fsh | stop,fsh/fsh | stop,fsh/stop,fsh | 1.0/1.0/1.0 | 0.0 | 1402.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchrX.1427221 |
| 90 | chrX:-97120K | 303 | 0.5/0.1 | -/- | 0.0/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | stop,fsh/stop,fsh | 1.0/1.0/0.9 | 0.0 | 1253.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchrX.1427225 |
| 91 | chrX:-110360K | 216 | 0.9/0.1 | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | stop,fsh/stop,fsh | 0.0/0.0/1.0 | 0.0 | 969.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchrX.1431736 |
| 92 | chrX:-117651K | 1305 | 0.3/0.2 | -/- | 0.0/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | OK/OK | 0.9/0.9/1.0 | 0.0 | 72.0 | 0.0 | 0.0 | 0.14 | x | 0.0/0.0/1.0 | orfchrX.1433550 |
| 93 | chrX:-119987K | 267 | 0.8/0.1 | -/- | 0.0/0.0 | stop,fsh/stop,fsh | stop,fsh/fsh | stop,fsh/stop,fsh | 0.9/0.9/1.0 | 0.0 | 1000.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/1.0 | orfchrX.1434611 |
| 94 | chrX:-152238K | 996 | 0.9/0.6 | -/- | 0.0/0.0 | fsh/fsh | fsh/fsh | fsh,errN/fsh,errN | 1.0/1.0/0.9 | 0.0 | 384.0 | 0.3 | 0.0 | 0.06 | xt | 0.0/0.0/0.0 | orfchrX.1445408 |