List of clusters
| No | Gene | Len. | Blast qCov/tCov | Domain qCov/tCov | EST all/spliced | Clean m full/part | Clean r full/part | Clean d full/part | Synteny m/r/d | Dupl. | Incompl. | CpG | OR | lr prob. | Ensemble/nscan/sgp/ eXoniphy/transmap | PET/SAGE/CAGE | id |
| 1 | chr11:+5069K | 273 | -/- | -/- | 0.0/0.0 | noaln/noaln | fsh,stop/stop,fsh | fsh,stop/fsh,stop | 0.0/1.0/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr11.84029 |
| 2 | chr11:+5079K | 228 | -/- | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | noaln/noaln | 0.0/0.0/0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr11.84040 |
| 3 | chr11:+64036K | 228 | -/- | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | fsh,stop/fsh,stop | 0.0/0.0/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr11.111965 |
| 4 | chr11:+64249K | 246 | -/- | -/- | 0.0/0.0 | stop,fsh/fsh,stop | fsh,stop/fsh | fsh,stop/fsh | 1.0/0.9/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.02 | | 0.0/0.0/0.0 | orfchr11.112413 |
| 5 | chr11:-116014K | 240 | -/- | -/- | 0.0/0.0 | fsh,stop/stop,fsh | fsh,stop/fsh | fsh,stop/fsh,stop | 0.9/0.9/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.02 | | 0.0/0.0/0.0 | orfchr11.137877 |
| 6 | chr13:+29425K | 237 | -/- | -/- | 0.0/0.0 | stop,fsh/fsh,stop | noaln/noaln | fsh,stop/fsh | 0.9/0.0/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.02 | | 0.0/0.0/1.0 | orfchr13.218274 |
| 7 | chr13:+112345K | 213 | -/- | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | noaln/noaln | 0.0/0.0/0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr13.246425 |
| 8 | chr13:-29652K | 249 | -/- | -/- | 0.0/0.0 | stop,fsh/fsh,stop | stop,fsh/stop,fsh | fsh,stop/stop,fsh | 0.8/0.8/0.8 | 0.0 | 0.0 | 0.0 | 0.0 | 0.02 | | 0.0/0.0/0.0 | orfchr13.218435 |
| 9 | chr13:-29668K | 261 | -/- | -/- | 0.0/0.0 | stop,fsh/fsh,stop | fsh,stop/fsh | stop,fsh/fsh,stop | 0.9/0.4/0.7 | 0.0 | 0.0 | 0.0 | 0.0 | 0.02 | | 0.0/0.0/0.0 | orfchr13.218442 |
| 10 | chr14:+52952K | 219 | -/- | -/- | 0.0/0.0 | noaln/noaln | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.0/1.0/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/1.0 | orfchr14.261699 |
| 11 | chr14:+53207K | 201 | -/- | -/- | 0.0/0.0 | fsh,stop/stop,fsh | fsh,stop/fsh | stop,fsh/fsh,stop | 0.9/0.9/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.03 | | 0.0/0.0/0.0 | orfchr14.261763 |
| 12 | chr14:+98480K | 243 | -/- | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | stop,fsh/fsh,stop | 0.0/0.0/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr14.283619 |
| 13 | chr14:-98822K | 201 | -/- | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | fsh,stop/fsh,stop | 0.0/0.0/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr14.283984 |
| 14 | chr16:+26143K | 234 | -/- | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | stop,fsh/fsh,stop | 0.8/0.9/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.02 | | 0.0/0.0/0.0 | orfchr16.363722 |
| 15 | chr16:+60920K | 249 | -/- | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | fsh,stop/fsh,stop | 0.0/0.0/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr16.378559 |
| 16 | chr16:+61219K | 207 | -/- | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/stop,fsh | fsh,stop/stop,fsh | 1.0/1.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.02 | | 0.0/0.0/0.0 | orfchr16.378628 |
| 17 | chr16:-26172K | 231 | -/- | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | stop,fsh/fsh | 0.0/0.0/0.6 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr16.363725 |
| 18 | chr16:-60961K | 282 | -/- | -/- | 0.0/0.0 | fsh,stop/fsh,stop | stop,fsh/fsh | fsh,stop/fsh,stop | 1.0/1.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.02 | | 0.0/0.0/0.0 | orfchr16.378580 |
| 19 | chr16:-61281K | 261 | -/- | -/- | 0.0/0.0 | fsh/fsh | fsh/fsh | fsh,stop/fsh,stop | 0.3/0.2/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr16.378635 |
| No | Gene | Len. | Blast qCov/tCov | Domain qCov/tCov | EST all/spliced | Clean m full/part | Clean r full/part | Clean d full/part | Synteny m/r/d | Dupl. | Incompl. | CpG | OR | lr prob. | Ensemble/nscan/sgp/ eXoniphy/transmap | PET/SAGE/CAGE | id |
| 20 | chr18:-24080K | 228 | -/- | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.8/0.8/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.02 | | 0.0/0.0/0.0 | orfchr18.475213 |
| 21 | chr18:-24210K | 222 | -/- | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.9/0.9/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr18.475238 |
| 22 | chr18:-59849K | 264 | -/- | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | noaln/noaln | 1.0/1.0/0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr18.491299 |
| 23 | chr18:-59876K | 207 | -/- | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | noaln/noaln | 1.0/0.9/0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr18.491314 |
| 24 | chr2:+51534K | 225 | -/- | -/- | 0.0/0.0 | stop/OK | fsh,stop/fsh,stop | fsh,stop/fsh | 0.2/0.6/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.02 | | 0.0/0.0/0.0 | orfchr2.799574 |
| 25 | chr2:+51555K | 237 | -/- | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | fsh,stop/fsh,stop | 0.0/0.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr2.799582 |
| 26 | chr2:+118062K | 213 | -/- | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | stop/stop | 0.0/0.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr2.829423 |
| 27 | chr2:+118320K | 255 | -/- | -/- | 0.0/0.0 | noaln/noaln | fsh,stop/fsh,stop | noaln/noaln | 0.0/0.7/0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr2.829529 |
| 28 | chr2:+220252K | 249 | -/- | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.9/0.8/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.03 | | 0.0/0.0/0.0 | orfchr2.870331 |
| 29 | chr2:+220372K | 249 | -/- | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.8/0.8/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.02 | | 0.0/0.0/0.0 | orfchr2.870408 |
| 30 | chr2:+234460K | 282 | -/- | -/- | 0.0/0.0 | fsh/noaln | OK/noaln | fsh,stop/fsh,stop | 0.0/0.0/0.6 | 0.0 | 0.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr2.877433 |
| 31 | chr2:-51552K | 273 | -/- | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.9/0.9/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.03 | | 0.0/0.0/0.0 | orfchr2.799581 |
| 32 | chr2:-118507K | 207 | -/- | -/- | 0.0/0.0 | OK/noaln | fsh/fsh | fsh,stop/fsh,stop | 0.1/0.1/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr2.829636 |
| 33 | chr2:-219990K | 243 | -/- | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.8/0.8/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.02 | | 0.0/0.0/0.0 | orfchr2.869766 |
| 34 | chr2:-220393K | 201 | -/- | -/- | 0.0/0.0 | fsh,stop/fsh | fsh,stop/fsh,stop | noaln/noaln | 0.7/0.7/0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | orfchr2.870417 |
| 35 | chr2:-220483K | 216 | -/- | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh | fsh/fsh | 1.0/0.9/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.02 | | 0.0/0.0/0.0 | orfchr2.870466 |
| 36 | chr21:+33790K | 246 | -/- | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | fsh,stop/fsh | 0.0/0.0/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr21.719387 |
| 37 | chr21:+34353K | 207 | -/- | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | fsh,stop/fsh,stop | 0.0/0.0/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr21.719704 |
| 38 | chr21:-39362K | 225 | -/- | -/- | 0.0/0.0 | noaln/noaln | fsh,stop/noaln | fsh,stop/fsh,stop | 0.0/0.1/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr21.723042 |
| 39 | chr22:-31799K | 279 | -/- | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.9/0.9/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.02 | | 0.0/0.0/0.0 | orfchr22.750494 |
| No | Gene | Len. | Blast qCov/tCov | Domain qCov/tCov | EST all/spliced | Clean m full/part | Clean r full/part | Clean d full/part | Synteny m/r/d | Dupl. | Incompl. | CpG | OR | lr prob. | Ensemble/nscan/sgp/ eXoniphy/transmap | PET/SAGE/CAGE | id |
| 40 | chr5:+131772K | 237 | -/- | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | stop,fsh/stop,fsh | 0.0/0.0/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr5.1078938 |
| 41 | chr5:+132050K | 246 | -/- | -/- | 0.0/0.0 | fsh/noaln | fsh/fsh | stop,fsh/stop,fsh | 0.0/1.0/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr5.1079143 |
| 42 | chr5:-131418K | 291 | -/- | -/- | 0.0/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | stop,fsh/stop,fsh | 0.5/0.5/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.02 | | 0.0/0.0/0.0 | orfchr5.1078590 |
| 43 | chr6:-41835K | 249 | -/- | -/- | 0.0/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | stop,fsh/fsh | 0.7/0.5/0.7 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr6.1136201 |
| 44 | chr7:-27081K | 225 | -/- | -/- | 0.0/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | stop,fsh/stop,fsh | 1.0/1.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.02 | | 0.0/0.0/0.0 | orfchr7.1203271 |
| 45 | chr7:-117367K | 291 | -/- | -/- | 0.0/0.0 | OK/noaln | OK/noaln | stop,fsh/stop,fsh | 0.1/0.1/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr7.1241724 |
| 46 | chr7:-126766K | 216 | -/- | -/- | 0.0/0.0 | noaln/noaln | stop,fsh/stop,fsh | stop,fsh/stop,fsh | 0.0/0.9/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr7.1244008 |
| 47 | chr8:-119246K | 213 | -/- | -/- | 0.0/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | stop,fsh/stop,fsh | 1.0/1.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.02 | | 0.0/0.0/0.0 | orfchr8.1313843 |
| 48 | chr8:-119248K | 279 | -/- | -/- | 0.0/0.0 | stop,fsh/stop,fsh | noaln/noaln | fsh/stop,fsh | 1.0/0.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.03 | | 0.0/0.0/1.0 | orfchr8.1313846 |
| 49 | chr9:+130881K | 297 | -/- | -/- | 0.0/0.0 | fsh/fsh | stop,fsh/stop,fsh | stop,fsh/stop,fsh | 0.4/0.7/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.02 | | 0.0/0.0/0.0 | orfchr9.1382552 |
| 50 | chr9:-130954K | 300 | -/- | -/- | 0.0/0.0 | noaln/noaln | stop,fsh/stop,fsh | stop,fsh/stop,fsh | 0.0/0.6/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchr9.1382668 |
| 51 | chrX:+153399K | 252 | -/- | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | stop,fsh/fsh | 0.0/0.0/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | orfchrX.1447703 |