| No | Gene | Len. | Blast qCov/tCov | Domain qCov/tCov | EST all/spliced | Clean m full/part | Clean r full/part | Clean d full/part | Synteny m/r/d | Dupl. | Incompl. | CpG | OR | lr prob. | Ensemble/nscan/sgp/ eXoniphy/transmap | PET/SAGE/CAGE | id |
| 1 | chr1:+26409K | 879 | 0.4/0.3 | -/- | 0.0/0.0 | fsh/fsh,stop | fsh,stop/fsh | fsh,stop/fsh,stop | 1.0/1.0/0.9 | 0.0 | 252.0 | 0.0 | 0.0 | 0.08 | | 0.0/0.0/0.0 | seg4.0004;orfchr1.577965 |
| 2 | chr1:+151100K | 288 | 1.0/1.0 | -/- | 0.0/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.02 | | 0.0/0.0/0.0 | seg3.0002;orfchr1.623924 |
| 3 | chr1:+226200K | 879 | 0.6/0.3 | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.8/0.8/0.8 | 0.0 | 0.0 | 0.0 | 0.0 | 0.09 | | 0.0/0.0/0.0 | seg4.0002;orfchr1.661135 |
| 4 | chr1:-199886K | 291 | 0.9/0.1 | -/- | 0.8/0.0 | fsh,stop/fsh | fsh,stop/fsh | fsh/fsh | 0.9/0.9/0.7 | 0.0 | 324.0 | 1.0 | 0.0 | 0.10 | | 0.0/0.0/6.0 | seg4.0001;orfchr1.645959 |
| 5 | chr10:-102965K | 474 | -/- | 0.6/0.2 | 0.2/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.8/0.8/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.14 | | 0.0/0.0/3.0 | seg4.0006;orfchr10.49624 |
| 6 | chr10:-126905K | 543 | 0.5/0.0 | -/- | 1.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | noaln/noaln | 0.8/0.8/0.0 | 0.0 | 159.0 | 0.0 | 0.0 | 0.25 | e | 0.0/0.0/0.0 | seg4.0008;orfchr10.63917 |
| 7 | chr10:-131199K | 831 | 0.8/0.4 | -/- | 0.8/0.0 | noaln/noaln | noaln/noaln | fsh/fsh | 0.0/0.0/0.2 | 0.0 | 111.0 | 0.0 | 0.0 | 0.16 | | 0.0/0.0/0.0 | seg4.0009;orfchr10.68071 |
| 8 | chr10:-134067K | 702 | 0.5/0.1 | -/- | 0.4/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.3/0.3/0.9 | 0.0 | 188.0 | 0.0 | 0.0 | 0.10 | | 0.0/0.0/3.0 | seg4.0010;orfchr10.72654 |
| 9 | chr11:+93437K | 243 | 0.8/0.2 | -/- | 0.0/0.0 | fsh,stop/stop | fsh/OK | fsh,stop/OK | 1.0/1.0/1.0 | 0.0 | 342.0 | 0.0 | 0.0 | 0.08 | xt | 0.0/0.0/0.0 | seg4.0020;orfchr11.129363 |
| 10 | chr11:+125723K | 360 | 0.5/0.1 | -/- | 1.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | noaln/noaln | 0.8/0.7/0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.20 | | 0.0/0.0/0.0 | seg4.0014;orfchr11.145887 |
| 11 | chr11:-18865K | 768 | 0.8/0.6 | 0.6/0.6 | 0.0/0.0 | fsh,stop/fsh,stop | noaln/noaln | fsh/fsh | 0.8/0.0/1.0 | 0.0 | 223.0 | 0.0 | 0.0 | 0.07 | | 0.0/0.0/0.0 | seg3.0010;orfchr11.92677 |
| 12 | chr11:-58812K | 1083 | 1.0/0.5 | 0.4/0.8 | 0.0/0.0 | fsh/OK | fsh/OK | fsh/OK | 1.0/1.0/1.0 | 0.0 | 980.0 | 0.0 | 0.0 | 0.16 | xt | 0.0/0.0/0.0 | seg3.0038;orfchr11.107166 |
| 13 | chr11:-62790K | 420 | 1.0/0.4 | -/- | 0.0/0.0 | fsh,stop/fsh,stop | noaln/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 33.0 | 0.0 | 0.0 | 0.03 | sx | 0.0/0.0/0.0 | seg4.0018;orfchr11.110742 |
| 14 | chr11:-113621K | 312 | 0.7/0.3 | -/- | 0.4/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh | 0.7/0.7/0.8 | 0.0 | 0.0 | 0.0 | 0.0 | 0.08 | | 0.0/0.0/0.0 | seg4.0011;orfchr11.136209 |
| 15 | chr11:-122354K | 273 | 0.9/0.3 | 0.3/0.4 | 0.0/0.0 | fsh,stop/OK | fsh,stop/stop | fsh,stop/OK | 1.0/1.0/1.0 | 0.0 | 141.0 | 0.9 | 0.0 | 0.19 | xt | 0.0/0.0/3.0 | seg4.0013;orfchr11.143473 |
| 16 | chr12:+64409K | 714 | 0.6/0.7 | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/noaln | 0.8/0.2/0.1 | 0.0 | 0.0 | 0.8 | 0.0 | 0.02 | | 0.0/0.0/1.0 | seg3.0053;orfchr12.183092 |
| 17 | chr12:+110822K | 210 | 1.0/0.1 | 0.8/0.5 | 0.7/0.0 | fsh/OK | fsh/OK | fsh/OK | 1.0/1.0/1.0 | 0.0 | 1251.0 | 0.0 | 0.0 | 0.20 | t | 0.0/0.0/0.0 | seg4.0021;orfchr12.197481 |
| 18 | chr12:+127465K | 642 | 1.0/0.2 | -/- | 0.0/0.0 | OK/OK | OK/OK | fsh/fsh | 1.0/1.0/1.0 | 0.0 | 252.0 | 0.4 | 0.0 | 0.03 | x | 0.0/0.0/0.0 | seg4.0023;orfchr12.206836 |
| 19 | chr12:-6938K | 540 | 0.7/0.1 | -/- | 0.4/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.2/0.4/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.09 | | 0.0/0.0/1.0 | seg4.0030;orfchr12.159464 |
| No | Gene | Len. | Blast qCov/tCov | Domain qCov/tCov | EST all/spliced | Clean m full/part | Clean r full/part | Clean d full/part | Synteny m/r/d | Dupl. | Incompl. | CpG | OR | lr prob. | Ensemble/nscan/sgp/ eXoniphy/transmap | PET/SAGE/CAGE | id |
| 20 | chr12:-16321K | 408 | 0.6/0.2 | -/- | 0.0/0.0 | OK/OK | OK/OK | fsh,stop/OK | 0.9/0.9/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.03 | | 0.0/0.0/0.0 | seg4.0024;orfchr12.163600 |
| 21 | chr12:-27638K | 336 | 0.6/0.2 | -/- | 0.9/0.0 | fsh/fsh | fsh/fsh | fsh/fsh | 1.0/1.0/1.0 | 1.0 | 502.0 | 0.0 | 0.0 | 0.14 | | 0.0/0.0/0.0 | seg4.0026;orfchr12.166662 |
| 22 | chr12:-120734K | 399 | 0.9/0.4 | -/- | 0.9/0.0 | fsh,stop/fsh,stop | fsh,stop,warnN/fsh,stop,warnN | fsh,stop/fsh,stop | 0.8/0.8/0.9 | 0.0 | 462.0 | 0.2 | 0.0 | 0.27 | | 0.0/0.0/0.0 | seg4.0022;orfchr12.202585 |
| 23 | chr13:+110157K | 297 | 1.0/0.1 | -/- | 1.0/0.0 | fsh,stop/fsh,stop | fsh/noaln | fsh/fsh | 0.5/0.0/0.4 | 0.0 | 509.0 | 0.0 | 0.0 | 0.10 | | 0.0/0.0/0.0 | seg4.0033;orfchr13.244385 |
| 24 | chr14:-103233K | 312 | 0.9/0.2 | -/- | 1.0/0.0 | fsh,stop/fsh,stop | noaln/noaln | fsh,stop/fsh,stop | 0.1/0.0/0.7 | 0.0 | 144.0 | 0.0 | 0.0 | 0.21 | | 0.0/0.0/2.0 | seg4.0034;orfchr14.288576 |
| 25 | chr16:+11214K | 963 | 0.6/0.4 | -/- | 0.2/0.0 | fsh,stop/fsh,stop | fsh,stop,errN/fsh,errN | fsh,stop,errN/fsh,stop,errN | 0.6/0.1/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.19 | | 0.0/0.0/0.0 | seg4.0038;orfchr16.356591 |
| 26 | chr16:-176K | 1797 | 0.7/0.8 | -/- | 0.2/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/noaln | 0.2/0.1/0.0 | 0.0 | 120.0 | 0.7 | 0.0 | 0.21 | | 0.0/5.0/0.0 | seg4.0039;orfchr16.345060 |
| 27 | chr16:-74287K | 234 | 0.8/0.3 | 0.6/0.8 | 0.0/0.0 | fsh,stop/stop | fsh,stop/fsh,stop | fsh,stop/OK | 1.0/0.9/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.11 | | 0.0/0.0/0.0 | seg4.0041;orfchr16.386698 |
| 28 | chr17:+7174K | 507 | 1.0/0.3 | -/- | 0.0/0.0 | OK/OK | OK/OK | OK/OK | 0.9/0.9/1.0 | 0.0 | 108.0 | 0.0 | 0.0 | 0.07 | t | 0.0/0.0/4.0 | seg4.0054;orfchr17.406837 |
| 29 | chr17:+7178K | 273 | 0.9/0.2 | -/- | 0.0/0.0 | fsh,stop/OK | fsh,stop/OK | fsh,stop/OK | 1.0/1.0/1.0 | 0.0 | 179.0 | 0.0 | 0.0 | 0.12 | st | 0.0/0.0/0.0 | seg4.0056;orfchr17.406841 |
| 30 | chr17:+68099K | 366 | 0.6/0.1 | -/- | 1.0/0.0 | fsh,stop/fsh | fsh/fsh | fsh,stop/fsh | 0.8/0.8/0.7 | 0.0 | 469.0 | 0.5 | 0.0 | 0.25 | | 0.0/0.0/0.0 | seg4.0053;orfchr17.447189 |
| 31 | chr17:-30899K | 516 | 1.0/0.2 | -/- | 0.0/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 324.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | seg4.0046;orfchr17.423688 |
| 32 | chr17:-31267K | 429 | 1.0/0.3 | -/- | 0.0/0.0 | fsh/fsh | fsh/fsh | OK/OK | 1.0/1.0/0.8 | 0.0 | 1539.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | seg4.0047;orfchr17.423962 |
| 33 | chr17:-36712K | 1026 | 0.9/1.0 | -/- | 0.0/0.0 | stop/OK | stop/OK | stop/OK | 1.0/1.0/1.0 | 0.0 | 183.0 | 0.0 | 0.0 | 0.21 | | 0.0/0.0/0.0 | seg2.0068;orfchr17.428299 |
| 34 | chr17:-39457K | 339 | 0.5/0.0 | -/- | 0.7/0.0 | fsh,stop/fsh,stop | noaln/noaln | fsh,stop/fsh,stop | 0.9/0.0/0.9 | 0.0 | 359.0 | 0.0 | 0.0 | 0.13 | | 0.0/0.0/0.0 | seg4.0051;orfchr17.431065 |
| 35 | chr17:-46037K | 213 | 0.8/0.2 | -/- | 0.6/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh | fsh,stop/fsh,stop | 0.9/0.9/0.9 | 0.0 | 186.0 | 0.0 | 0.0 | 0.14 | | 0.0/0.0/0.0 | seg4.0052;orfchr17.436968 |
| 36 | chr17:-78651K | 441 | 0.8/0.0 | -/- | 0.5/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.9/0.6/0.6 | 0.0 | 48.0 | 0.8 | 0.0 | 0.09 | | 0.0/0.0/0.0 | seg4.0061;orfchr17.462433 |
| 37 | chr18:-13605K | 363 | 0.9/0.1 | -/- | 0.6/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh | 0.9/0.9/0.7 | 0.0 | 0.0 | 0.0 | 0.0 | 0.18 | | 0.0/0.0/0.0 | seg4.0062;orfchr18.471050 |
| 38 | chr19:+55954K | 735 | 0.9/0.6 | 0.8/0.7 | 1.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | noaln/noaln | 1.0/1.0/0.0 | 0.0 | 329.0 | 0.0 | 0.0 | 0.19 | | 0.0/0.0/0.0 | seg4.0079;orfchr19.542702 |
| 39 | chr19:-363K | 639 | 0.6/0.1 | -/- | 0.5/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.2/0.5/0.8 | 0.0 | 228.0 | 0.0 | 0.0 | 0.10 | | 0.0/1.0/0.0 | seg4.0070;orfchr19.501024 |
| No | Gene | Len. | Blast qCov/tCov | Domain qCov/tCov | EST all/spliced | Clean m full/part | Clean r full/part | Clean d full/part | Synteny m/r/d | Dupl. | Incompl. | CpG | OR | lr prob. | Ensemble/nscan/sgp/ eXoniphy/transmap | PET/SAGE/CAGE | id |
| 40 | chr19:-9822K | 456 | 0.4/0.3 | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh | fsh,stop/fsh,stop | 0.8/0.8/0.8 | 0.0 | 0.0 | 0.0 | 0.0 | 0.08 | t | 0.0/0.0/0.0 | seg4.0082;orfchr19.511951 |
| 41 | chr19:-22492K | 501 | 0.5/0.2 | -/- | 0.9/0.0 | noaln/noaln | noaln/noaln | fsh,stop/fsh,stop | 0.0/0.0/0.9 | 1.0 | 60.0 | 1.0 | 0.0 | 0.15 | x | 0.0/0.0/2.0 | seg4.0068;orfchr19.522928 |
| 42 | chr19:-39570K | 294 | 0.8/0.5 | -/- | 1.0/0.0 | OK/noaln | noaln/noaln | fsh,stop/fsh,stop | 0.0/0.0/0.9 | 0.0 | 182.0 | 0.0 | 0.0 | 0.18 | | 0.0/0.0/0.0 | seg3.0062;orfchr19.529247 |
| 43 | chr19:-43067K | 1020 | 1.0/1.0 | -/- | 0.0/0.0 | OK/OK | noaln/noaln | OK/OK | 1.0/0.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.11 | ext | 0.0/0.0/0.0 | seg3.0064;orfchr19.531917 |
| 44 | chr19:-47478K | 351 | 0.7/0.3 | -/- | 0.5/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 0.7/0.7/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.17 | | 0.0/0.0/0.0 | seg4.0073;orfchr19.535889 |
| 45 | chr19:-51623K | 615 | 0.7/0.4 | -/- | 0.2/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.23 | x | 0.0/0.0/8.0 | seg4.0074;orfchr19.539030 |
| 46 | chr19:-63634K | 345 | 0.8/0.2 | -/- | 1.0/0.0 | noaln/noaln | noaln/noaln | fsh,stop/fsh | 0.0/0.0/0.9 | 0.0 | 318.0 | 0.0 | 0.0 | 0.22 | | 0.0/0.0/0.0 | seg4.0080;orfchr19.549391 |
| 47 | chr2:+6045K | 423 | 0.4/0.1 | -/- | 1.0/0.0 | fsh/fsh,stop | fsh/fsh | noaln/noaln | 0.3/0.3/0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.14 | | 0.0/0.0/0.0 | seg4.0092;orfchr2.775801 |
| 48 | chr2:+118377K | 219 | 1.0/0.2 | 0.7/0.2 | 0.3/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 123.0 | 0.0 | 0.4 | 0.14 | xt | 0.0/0.0/0.0 | seg4.0083;orfchr2.829567 |
| 49 | chr2:+134625K | 1323 | 0.8/0.5 | -/- | 0.3/0.0 | noaln/noaln | fsh,errN/fsh,errN | fsh,stop/fsh | 0.0/0.0/0.1 | 0.0 | 378.0 | 0.0 | 0.0 | 0.08 | | 0.0/0.0/0.0 | seg4.0085;orfchr2.840162 |
| 50 | chr2:-88084K | 750 | 1.0/1.0 | -/- | 0.0/0.0 | fsh/fsh | fsh/fsh | fsh/fsh | 0.8/0.7/1.0 | 0.0 | 159.0 | 0.0 | 0.0 | 0.15 | t | 0.0/0.0/1.0 | seg2.0071;orfchr2.809355 |
| 51 | chr20:+4750K | 540 | 0.4/0.0 | -/- | 0.6/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh | 0.8/0.7/0.9 | 0.0 | 81.0 | 0.0 | 0.0 | 0.26 | | 0.0/0.0/1.0 | seg4.0097;orfchr20.676897 |
| 52 | chr20:+31191K | 783 | 1.0/0.5 | -/- | 0.0/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh/fsh,stop | 0.4/0.5/1.0 | 0.0 | 1437.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | seg2.0072;orfchr20.684854 |
| 53 | chr20:+61582K | 465 | 0.9/0.2 | -/- | 1.0/0.0 | fsh,stop/fsh | noaln/noaln | noaln/noaln | 0.3/0.0/0.0 | 0.0 | 165.0 | 0.5 | 0.0 | 0.12 | | 0.0/0.0/0.0 | seg4.0099;orfchr20.711206 |
| 54 | chr20:-34145K | 306 | 0.9/0.3 | -/- | 0.5/0.0 | fsh,stop/fsh,stop | fsh,stop/fsh,stop | fsh,stop/fsh,stop | 1.0/0.9/1.0 | 0.0 | 160.0 | 0.0 | 0.0 | 0.08 | | 0.0/0.0/0.0 | seg4.0095;orfchr20.691210 |
| 55 | chr21:+44453K | 378 | 0.8/0.4 | -/- | 0.8/0.0 | noaln/noaln | fsh,stop/fsh,stop | fsh/fsh | 0.0/0.9/0.3 | 0.0 | 165.0 | 0.0 | 0.0 | 0.08 | | 0.0/0.0/0.0 | seg4.0103;orfchr21.728381 |
| 56 | chr21:-34694K | 756 | 1.0/1.0 | -/- | 0.2/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.21 | sxt | 0.0/0.0/0.0 | seg1.0003;chr21.723.9 |
| 57 | chr21:-38499K | 396 | 0.6/0.1 | -/- | 1.0/0.0 | noaln/noaln | noaln/noaln | fsh/fsh | 0.0/0.0/1.0 | 0.0 | 474.0 | 0.0 | 0.0 | 0.20 | | 0.0/0.0/0.0 | seg4.0102;orfchr21.722390 |
| 58 | chr22:-21905K | 243 | 0.8/0.2 | -/- | 1.0/0.0 | noaln/noaln | noaln/noaln | fsh,stop/fsh,stop | 0.0/0.0/0.6 | 0.0 | 129.0 | 0.0 | 0.0 | 0.15 | | 0.0/0.0/0.0 | seg4.0104;orfchr22.743111 |
| 59 | chr22:-39378K | 567 | 0.7/0.1 | -/- | 0.5/0.0 | fsh,stop/fsh,stop | noaln/noaln | fsh,stop/fsh,stop | 0.6/0.0/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.13 | | 0.0/0.0/0.0 | seg4.0105;orfchr22.756020 |
| No | Gene | Len. | Blast qCov/tCov | Domain qCov/tCov | EST all/spliced | Clean m full/part | Clean r full/part | Clean d full/part | Synteny m/r/d | Dupl. | Incompl. | CpG | OR | lr prob. | Ensemble/nscan/sgp/ eXoniphy/transmap | PET/SAGE/CAGE | id |
| 60 | chr3:+47029K | 306 | 0.6/0.3 | -/- | 0.4/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | fsh/fsh | 1.0/1.0/1.0 | 0.0 | 508.0 | 0.0 | 0.0 | 0.17 | xt | 0.0/1.0/0.0 | seg4.0121;orfchr3.909922 |
| 61 | chr3:+131765K | 417 | 0.9/0.3 | 0.7/0.6 | 0.0/0.0 | OK/OK | stop,fsh/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 252.0 | 0.0 | 0.0 | 0.13 | xt | 0.0/0.0/0.0 | seg4.0113;orfchr3.944150 |
| 62 | chr3:+131768K | 510 | 1.0/0.8 | 0.8/0.9 | 0.0/0.0 | stop/OK | stop/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 348.0 | 0.0 | 0.0 | 0.27 | xt | 0.0/0.0/0.0 | seg4.0115;orfchr3.944162 |
| 63 | chr3:+131772K | 513 | 0.9/0.7 | 0.8/0.8 | 0.0/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 141.0 | 0.0 | 0.0 | 0.26 | xt | 0.0/0.0/0.0 | seg4.0116;orfchr3.944180 |
| 64 | chr3:+157237K | 756 | 1.0/0.3 | 0.8/0.8 | 0.0/0.0 | stop,fsh/OK | stop,fsh/OK | stop,fsh/stop,fsh | 1.0/1.0/1.0 | 0.0 | 297.0 | 0.0 | 0.0 | 0.25 | xt | 0.0/0.0/0.0 | seg4.0118;orfchr3.954104 |
| 65 | chr3:-49886K | 702 | 1.0/0.2 | 1.0/0.7 | 0.0/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 999.0 | 0.0 | 0.0 | 0.05 | xt | 0.0/0.0/2.0 | seg2.0075;orfchr3.907154 |
| 66 | chr3:-49887K | 417 | 1.0/0.1 | 0.5/0.2 | 0.1/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 1815.0 | 0.0 | 0.0 | 0.01 | xt | 0.0/0.0/0.0 | seg2.0076;orfchr3.907158 |
| 67 | chr5:+72065K | 288 | 0.7/0.5 | 0.6/0.5 | 0.0/0.0 | fsh/OK | fsh,errN/errN | fsh/OK | 1.0/0.0/0.9 | 0.0 | 86.0 | 0.0 | 0.0 | 0.14 | t | 0.0/0.0/0.0 | seg4.0139;orfchr5.1060972 |
| 68 | chr5:-54202K | 564 | 1.0/0.2 | -/- | 0.0/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 1689.0 | 0.0 | 0.0 | 0.00 | x | 0.0/0.0/0.0 | seg4.0137;orfchr5.1054736 |
| 69 | chr5:-157050K | 405 | 0.4/0.1 | -/- | 1.0/0.0 | fsh/fsh | OK/OK | stop,fsh/stop,fsh | 1.0/0.4/0.7 | 1.0 | 545.0 | 1.0 | 0.0 | 0.11 | x | 0.0/0.0/0.0 | seg4.0132;orfchr5.1092758 |
| 70 | chr6:+303K | 429 | 0.8/0.2 | -/- | 1.0/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | noaln/noaln | 0.7/0.7/0.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.22 | | 0.0/0.0/3.0 | seg4.0143;orfchr6.1111218 |
| 71 | chr6:+34621K | 423 | 0.9/0.1 | -/- | 0.5/0.0 | noaln/noaln | noaln/noaln | stop,fsh/stop,fsh | 0.0/0.0/1.0 | 0.0 | 0.0 | 0.0 | 0.0 | 0.08 | | 0.0/0.0/0.0 | seg4.0144;orfchr6.1131092 |
| 72 | chr6:+46828K | 213 | 0.9/0.1 | 0.8/0.9 | 0.0/0.0 | stop,fsh/OK | stop,fsh/OK | stop,fsh/OK | 1.0/1.0/1.0 | 0.0 | 33.0 | 0.0 | 0.0 | 0.20 | x | 0.0/0.0/0.0 | seg4.0146;orfchr6.1139952 |
| 73 | chr6:-156423K | 684 | -/- | 0.6/0.1 | 0.0/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | stop,fsh/stop,fsh | 0.8/0.8/0.9 | 0.0 | 0.0 | 0.0 | 0.0 | 0.08 | | 0.0/0.0/0.0 | seg4.0141;orfchr6.1172339 |
| 74 | chr7:-5613K | 315 | 0.9/0.1 | -/- | 0.9/0.0 | noaln/noaln | noaln/noaln | stop,fsh/stop,fsh | 0.0/0.0/0.9 | 0.0 | 311.0 | 0.0 | 0.0 | 0.14 | | 0.0/19.0/0.0 | seg4.0148;orfchr7.1196258 |
| 75 | chr7:-82419K | 1545 | 1.0/0.1 | -/- | 0.1/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 1707.0 | 0.0 | 0.0 | 0.01 | xt | 0.0/0.0/13.0 | seg4.0149;orfchr7.1228706 |
| 76 | chr7:-149187K | 297 | 0.9/0.2 | -/- | 1.0/0.0 | fsh/fsh | stop,fsh/stop,fsh | stop,fsh/stop,fsh | 0.3/0.3/0.4 | 0.0 | 181.0 | 0.0 | 0.0 | 0.17 | | 0.0/0.0/0.0 | seg4.0147;orfchr7.1256260 |
| 77 | chr8:+145175K | 603 | 0.5/0.1 | -/- | 0.2/0.0 | stop,fsh/stop,fsh | noaln/noaln | stop,fsh/stop,fsh | 0.8/0.0/0.9 | 0.0 | 0.0 | 0.1 | 0.0 | 0.10 | | 0.0/0.0/2.0 | seg4.0154;orfchr8.1330314 |
| 78 | chr8:-57470K | 330 | 0.9/0.3 | 0.6/0.3 | 0.0/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/0.9 | 0.0 | 42.0 | 0.0 | 0.0 | 0.09 | xt | 0.0/0.0/0.0 | seg4.0155;orfchr8.1295382 |
| 79 | chr9:+89670K | 255 | 0.5/0.1 | -/- | 0.8/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | OK/OK | 0.9/0.9/0.6 | 0.0 | 99.0 | 0.0 | 0.0 | 0.09 | | 0.0/0.0/0.0 | seg4.0165;orfchr9.1359492 |
| No | Gene | Len. | Blast qCov/tCov | Domain qCov/tCov | EST all/spliced | Clean m full/part | Clean r full/part | Clean d full/part | Synteny m/r/d | Dupl. | Incompl. | CpG | OR | lr prob. | Ensemble/nscan/sgp/ eXoniphy/transmap | PET/SAGE/CAGE | id |
| 80 | chr9:+124917K | 522 | 0.6/0.2 | -/- | 0.5/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | stop,fsh/stop,fsh | 0.6/0.6/0.8 | 0.0 | 156.0 | 0.0 | 0.0 | 0.12 | | 0.0/1.0/0.0 | seg4.0157;orfchr9.1377884 |
| 81 | chr9:+132238K | 240 | 0.6/0.0 | 0.4/0.4 | 0.4/0.0 | fsh/fsh | fsh,errN/fsh,errN | stop,fsh/stop,fsh | 0.7/0.0/1.0 | 0.0 | 195.0 | 0.0 | 0.0 | 0.19 | x | 0.0/0.0/0.0 | seg4.0159;orfchr9.1383732 |
| 82 | chr9:+132240K | 354 | 1.0/0.4 | 0.7/0.9 | 0.0/0.0 | stop,fsh/stop,fsh | fsh,errN/fsh,errN | stop,fsh/stop,fsh | 0.9/0.0/1.0 | 0.0 | 231.0 | 0.0 | 0.0 | 0.14 | x | 0.0/0.0/0.0 | seg4.0160;orfchr9.1383738 |
| 83 | chr9:+132248K | 537 | -/- | 0.4/0.9 | 0.0/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | fsh/fsh | 0.9/0.8/0.7 | 0.0 | 0.0 | 0.0 | 0.0 | 0.13 | x | 0.0/0.0/0.0 | seg4.0161;orfchr9.1383753 |
| 84 | chr9:+138671K | 954 | 0.7/0.7 | -/- | 0.0/0.0 | stop,fsh/noaln | stop,fsh/noaln | stop,fsh/stop,fsh | 0.1/0.1/0.6 | 0.0 | 845.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/1.0 | seg3.0083;orfchr9.1393979 |
| 85 | chr9:-113351K | 294 | 0.5/0.1 | -/- | 0.9/0.0 | noaln/noaln | noaln/noaln | stop,fsh/stop,fsh | 0.0/0.0/0.9 | 0.0 | 230.0 | 0.0 | 0.0 | 0.13 | | 0.0/3.0/0.0 | seg4.0156;orfchr9.1372271 |
| 86 | chr9:-138285K | 750 | 0.6/0.3 | -/- | 0.0/0.0 | stop,fsh/OK | stop,fsh/OK | fsh/OK | 0.9/0.9/1.0 | 0.0 | 255.0 | 0.0 | 0.0 | 0.14 | | 0.0/0.0/0.0 | seg4.0162;orfchr9.1392855 |
| 87 | chrX:+9895K | 645 | 0.9/0.9 | -/- | 0.6/0.0 | noaln/noaln | noaln/noaln | OK/OK | 0.0/0.0/1.0 | 0.0 | 6.0 | 0.0 | 0.0 | 0.08 | | 0.0/0.0/0.0 | seg2.0087;orfchrX.1384884 |
| 88 | chrX:+63542K | 249 | 0.9/0.5 | 0.9/0.6 | 1.0/0.0 | OK/OK | OK/OK | OK/OK | 1.0/1.0/1.0 | 0.0 | 183.0 | 0.0 | 0.0 | 0.28 | | 0.0/0.0/0.0 | seg3.0085;orfchrX.1420497 |
| 89 | chrX:+83859K | 465 | 1.0/0.1 | -/- | 0.0/0.0 | fsh/fsh | noaln/noaln | OK/OK | 1.0/1.0/1.0 | 0.0 | 552.0 | 0.0 | 0.0 | 0.02 | t | 0.0/0.0/0.0 | seg4.0171;orfchrX.1425470 |
| 90 | chrX:+107104K | 414 | 0.9/0.2 | 0.4/0.3 | 0.0/0.0 | noaln/noaln | noaln/noaln | fsh/OK | 0.0/0.0/1.0 | 0.0 | 998.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | seg4.0166;orfchrX.1430623 |
| 91 | chrX:+107105K | 486 | 0.8/0.1 | -/- | 0.0/0.0 | noaln/noaln | noaln/noaln | OK/OK | 0.0/0.0/1.0 | 0.0 | 1188.0 | 0.0 | 0.0 | 0.00 | | 0.0/0.0/0.0 | seg4.0167;orfchrX.1430626 |
| 92 | chrX:+124284K | 1074 | 0.8/0.7 | -/- | 0.0/0.0 | stop,fsh/stop,fsh | stop,fsh/stop,fsh | OK/OK | 0.9/0.9/0.3 | 0.0 | 987.0 | 0.0 | 0.0 | 0.01 | | 0.0/0.0/0.0 | seg2.0084;orfchrX.1417954 |