List of clusters
No | Gene | Len. | Blast qCov/tCov | Pfam qCov/tCov | EST all/spliced | Clean m | Clean r | Clean d | Synteny m/r/d | CpG | OR | lr prob. | Ensemble/nscan/sgp | PET/SAGE/CAGE | id |
1 | chr1:+110457K | 525 | 1.0/1.0 | 0.4/1.0 | 1.0/0.0 | fsh | too_many_Ns,fsh | fsh | 1.0/0.5/1.0 | 0.0 | 0.0 | 0.1 | ens | 1.0/0.0/0.0 | orfchr1.612972 |
2 | chr1:-203319K | 768 | 1.0/1.0 | -/- | 1.0/0.0 | fsh | fsh | fsh | 1.0/1.0/1.0 | 0.0 | 0.0 | 0.0 | e | 3.0/1.0/1.0 | orfchr1.649278 |
3 | chr11:-85074K | 1125 | 1.0/1.0 | -/- | 1.0/0.0 | nons,fsh | fsh | nons,fsh | 1.0/1.0/1.0 | 0.0 | 0.0 | 0.1 | e | 0.0/0.0/2.0 | orfchr11.126636 |
4 | chr12:+47009K | 768 | 1.0/1.0 | -/- | 1.0/0.0 | nons,fsh | nons,fsh | nons,fsh | 1.0/1.0/1.0 | 0.7 | 0.0 | 0.1 | e | 2.0/0.0/3.0 | orfchr12.172435 |
5 | chr14:-20094K | 618 | 1.0/1.0 | 0.5/0.8 | 0.0/0.0 | nons,fsh | nons,fsh | nons,fsh | 1.0/1.0/1.0 | 0.0 | 0.0 | 0.1 | e | 0.0/0.0/0.0 | orfchr14.250984 |
6 | chr2:-70041K | 1032 | 1.0/1.0 | -/- | 1.0/0.0 | fsh | nons,fsh | nons,fsh | 1.0/1.0/0.9 | 0.2 | 0.0 | 0.1 | e | 1.0/0.0/0.0 | orfchr2.806391 |
7 | chr21:+30735K | 414 | 0.9/0.9 | 1.0/1.0 | 0.0/0.0 | fsh | fsh | nons,fsh | 1.0/1.0/1.0 | 0.0 | 0.0 | 0.0 | es | 0.0/0.0/0.0 | orfchr21.717722 |
8 | chr21:-30666K | 528 | 1.0/1.0 | 1.0/1.0 | 1.0/0.0 | fsh | fsh | fsh | 1.0/1.0/1.0 | 0.0 | 0.0 | 0.1 | es | 0.0/0.0/0.0 | orfchr21.717682 |
9 | chr6:-26355K | 297 | 1.0/1.0 | -/- | 0.0/0.0 | no_aln | no_aln | OK | 0.0/0.0/0.9 | 0.6 | 0.0 | 0.1 | ens | 2.0/0.0/0.0 | orfchr6.1124123 |
10 | chr9:+138499K | 612 | 1.0/1.0 | -/- | 0.5/0.0 | nons,fsh | nons,fsh | nons,fsh | 0.5/0.2/0.8 | 0.4 | 0.0 | 0.0 | e | 0.0/2.0/0.0 | orfchr9.1393472 |
11 | chr9:-21131K | 588 | 1.0/1.0 | 1.0/1.0 | 0.4/0.0 | fsh | nons,fsh | nons,fsh | 1.0/0.8/1.0 | 0.0 | 0.0 | 0.1 | es | 0.0/0.0/1.0 | orfchr9.1340035 |