ID: uc009rrz.21
GENE: Plxnb1(22)
chr9:109012991-109013166+


(1)
AGO.mut
(2)
AGO2.ip
(1)
B-CELL
(14)
BRAIN
(5)
CELL-LINE
(1)
DCR.mut
(1)
DGCR8.mut
(14)
EMBRYO
(10)
ESC
(3)
HEART
(4)
LIVER
(8)
OTHER
(9)
OTHER.mut
(1)
OVARY
(4)
PIWI.ip
(2)
PIWI.mut
(25)
TESTES
(2)
TOTAL-RNA

Sense strand
CACATCCCCATGCCCTCCGAGAGGCTCCAGATGCTTTGCCTGAGTTCACGGTCAGTGGGCAGGACCTGGGCTAGGTTGGGCATCGTGCTATCTGGGACCCTGGCTCACAGGTAGCTTCCCACGCAGGTACAGATGGGCAACCTGCGCTTCTCCTTGGGTCATGTGCAGTACGATGG
.......................................................((((.((.((((((((((((((.(((.....)))......)))).)))))..)))))..)).)))).......................................................
.......................................................56....................................................................126................................................
SizePerfect hitTotal NormPerfect NormSRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
mjTestesWT1()
Testes Data. (testes)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
mjTestesWT4()
Testes Data. (testes)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
mjTestesWT2()
Testes Data. (testes)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR206941(GSM723282)
other. (brain)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR023847(GSM307156)
mESv6.5smallrna_rep1. (cell line)
mjTestesWT3()
Testes Data. (testes)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
SRR037920(GSM510458)
e12p5_rep2. (embryo)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR095855BC6(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR037906(GSM510442)
brain_rep3. (brain)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR077864(GSM637801)
18-30 nt small RNAs. (liver)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR014237(GSM319961)
10 dpp MILI-KO total. (mili testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR206942(GSM723283)
other. (brain)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR037928(GSM510466)
e7p5_rep2. (embryo)
GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR037919(GSM510457)
e12p5_rep1. (embryo)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR306539(GSM750582)
19-24nt. (ago2 brain)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR206939(GSM723280)
other. (brain)
SRR553582(SRX182788)
source: Brain. (Brain)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
GSM510454(GSM510454)
newborn_rep10. (total RNA)
SRR095855BC1(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
....................................................................................................TGGCTCACAGGTAGCTTCCCACGC....................................................24134.0034.00-4.005.001.001.002.00---3.006.00---------3.00---1.00--1.00------2.00-2.00-1.00------------------------1.00--------1.00--------------
....................................................................................................TGGCTCACAGGTAGCTTCCCACGCA...................................................25121.0021.00-2.002.005.003.00--2.00---2.001.00--------------------1.00----1.00----------------------1.00------------------1.00------
....................................................................................................TGGCTCACAGGTAGCTTCCCACG.....................................................23117.0017.00-3.001.00--1.00-1.00-----------1.00-2.00--------1.00-1.00----1.00------------1.00-1.00----1.00--1.00-----1.00--------------------
....................................................................................................TGGCTCACAGGTAGCTTCCCACGCAG..................................................26111.0011.00-1.001.00--1.00-----2.00----3.00--------------------------1.00-----------1.00--------1.00----------------------
..................................................GTCAGTGGGCAGGACCTGGGCTAGGTTGGGCATCGTGCTATCTGGGACCCTGGCTCACAGGTAGCTTCCCACGCAG..................................................7619.009.009.00--------------------------------------------------------------------------------------
............................................................AGGACCTGGGCTAGGTTGGGCAT.............................................................................................2318.008.00-1.00----7.00--------------------------------------------------------------------------------
............................................................AGGACCTGGGCTAGGTTGGGC...............................................................................................2118.008.00-------1.006.00----1.00-------------------------------------------------------------------------
....................................................................................................TGGCTCACAGGTAGCTTCCCACGCAT..................................................2616.0021.00--1.00----2.00-------------------1.00------------------1.00---------------------------------------1.00
..................................................GTCAGTGGGCAGGACCTGGGCTAGG.....................................................................................................2516.006.00---1.00-----1.00----4.00------------------------------------------------------------------------
............................................................AGGACCTGGGCTAGGTTGGGCA..............................................................................................2216.006.00-2.001.00--------------------2.00-------------1.00-------------------------------------------------
..................................................GTCAGTGGGCAGGACCTGGGCTAGGTTGGGCATCGTGCTATCTGGGACCCTGGCTCACAGGTAGCTTCCCACGC....................................................7415.005.005.00--------------------------------------------------------------------------------------
..................................................GTCAGTGGGCAGGACCTGGGCTAGA.....................................................................................................255.000.00-----1.00------1.00----1.00-----------------1.00-----1.00---------------------------------------------
..................................................GTCAGTGGGCAGGACCTGGGCTAGGTTGGGCATCGTGCTATCTGGGACCCTGGCTCACAGGTAGCTTCCCA.......................................................7115.005.005.00--------------------------------------------------------------------------------------
..................................................GTCAGTGGGCAGGACCTGGGCTAGT.....................................................................................................254.000.00--------------------------1.00-2.00----------------------------------------------------1.00-----
..................................................GTCAGTGGGCAGGACCTGGGCTAGGTTGGGCATCGTGCTATCTGGGACCCTGGCTCACAGGTAGCTTCCCACGCAGTT................................................7813.009.003.00--------------------------------------------------------------------------------------
..................................................GTCAGTGGGCAGGACCTGGGCTAGGT....................................................................................................2613.003.00-------------------------------2.00---1.00---------------------------------------------------
....................................................CAGTGGGCAGGACCTGGGCTAGGTTGGGCATCGTGCTATCTGGGACCCTGGCTCACAGGTAGCTTCCCACG.....................................................7113.003.003.00--------------------------------------------------------------------------------------
..................................................GTCAGTGGGCAGGACCTGGGCTAGGTTGGGCATCGTGCTATCTGGGACCCTGGCTCACAGGTAGCTTCCCACGCAGT.................................................7713.009.003.00--------------------------------------------------------------------------------------
....................................................................................................TGGCTCACAGGTAGCTTCCCACGA....................................................2413.0017.00-----1.00-------------1.00-------------------------------1.00-----------------------------------
....................................................................................................TGGCTCACAGGTAGCTTCCCACGCAGT.................................................2713.0011.00-----------1.00-----------------1.00-------------------------------------------------------1.00-
..................................................GTCAGTGGGCAGGACCTGGGCTAGGTTGGGCATCGTGCTATCTGGGACCCTGGCTCACAGGTAGCTTCCCACGCT...................................................7513.005.003.00--------------------------------------------------------------------------------------
...................................................TCAGTGGGCAGGACCTGGGCTAGG.....................................................................................................2413.003.00---1.00---------------------1.00------1.00------------------------------------------------------
..................................................GTCAGTGGGCAGGACCTGGGCTA.......................................................................................................2313.003.00------------1.00----1.00--------------------------------------1.00------------------------------
........................................................................................................TCACAGGTAGCTTCCCACGCAGT.................................................233.000.00-1.00--1.00-------------------------1.00--------------------------------------------------------
..................................................GTCAGTGGGCAGGACCTGGGCTAGGTT...................................................................................................2713.003.00---------------------------------------------1.00-----------------------1.00-------------1.00---
....................................................................................................TGGCTCACAGGTAGCTTCCCACGCATT.................................................2712.0021.00-----------------------------1.00----------------------------1.00----------------------------
...................................................TCAGTGGGCAGGACCTGGGCTAGGTTGGGCATCGTGCTATCTGGGACCCTGGCTCACAGGTAGCTTCCCACGCAT..................................................7512.001.002.00--------------------------------------------------------------------------------------
........................................................................AGGTTGGGCATCGTGCTATC....................................................................................2012.002.00---------------2.00-----------------------------------------------------------------------
..................................................GTCAGTGGGCAGGACCTGGGCTAA......................................................................................................2412.003.00------1.00-------------------------------------1.00------------------------------------------
....................................................................................................TGGCTCACAGGTAGCTTCCCACGCAA..................................................2612.0021.00---------------------------------1.00-------------------------1.00---------------------------
..................................................GTCAGTGGGCAGGACCTGGGCT........................................................................................................2212.002.00-------1.00-------------------------------1.00-----------------------------------------------
......................................................................................GCTATCTGGGACCCTGGC........................................................................1812.002.00-------------2.00-------------------------------------------------------------------------
....................................................................................................TGGCTCACAGGTAGCTTCCCACGCG...................................................2512.0034.00------------------2.00--------------------------------------------------------------------
.......................................................................................................CTCACAGGTAGCTTCCCACGCAGT.................................................242.000.00----1.00----------------1.00-----------------------------------------------------------------
....................................................................................................TGGCTCACAGGTAGCTTCCCACGT....................................................2411.0017.00-------1.00-------------------------------------------------------------------------------
..................................................GTCAGTGGGCAGGACCTGT...........................................................................................................191.000.00------------------------------------------------------1.00--------------------------------
....................................................................................................TGGCTCACAGGTAGCTTCCCACGAA...................................................2511.0017.00---1.00-----------------------------------------------------------------------------------
.....................................................................................................................................TGGGCAACCTGCGCTGAAG........................191.000.00--------------------------------------------------------------------------1.00------------
....................................................................................................TGGCTCACAGGTAGCTTCCCACGTA...................................................2511.0017.00-----1.00---------------------------------------------------------------------------------
....................................................................................................TGGCTCACAGGTAGCTTCCCACGCAGA.................................................2711.0011.00----------------------------------------------------------------------------------1.00----
.......................................................................................................CTCACAGGTAGCTTCCCACGCAGTT................................................251.000.00-1.00-------------------------------------------------------------------------------------
..........................CCAGATGCTTTGCCTGTTCT..................................................................................................................................201.000.00------------------------------------------------1.00--------------------------------------
.....CCCCATGCCCTCCGAGAGGCTCCAGATG...............................................................................................................................................2811.001.00-----------------------------------------------1.00---------------------------------------
..................................................GTCAGTGGGCAGGACCTGGGCTAGGAGA..................................................................................................2811.006.00---------------------------------------1.00-----------------------------------------------
............................................................................................................AGGTAGCTTCCCACGTTT..................................................181.000.00-----------------------------------------------------1.00---------------------------------
..................................................GTCAGTGGGCAGGACCTGGGCTAGAA....................................................................................................261.000.00-----------------1.00---------------------------------------------------------------------
......................................................................................................GCTCACAGGTAGCTTCCCACGCAGTT................................................2611.001.00--1.00------------------------------------------------------------------------------------
......................................................................................GCTATCTGGGACCCTAGC........................................................................181.000.00-------------1.00-------------------------------------------------------------------------
.....CCCCATGCCCTCCGAGAGGCTCCC...................................................................................................................................................241.000.00------------------------1.00--------------------------------------------------------------
.............................GATGCTTTGCCTGAGGTT.................................................................................................................................181.000.00---1.00-----------------------------------------------------------------------------------
..................................................GTCAGTGGGCAGGACCTGGGCTAGGTTGGGCATCGTGCTATCTGGGACCCTGGCTCACAGGTAGCTTCCCACGCA...................................................7511.001.001.00--------------------------------------------------------------------------------------
..................................................GTCAGTGGGCAGGACCTGGG..........................................................................................................2011.001.00---------1.00-----------------------------------------------------------------------------
................................................CGGTCAGTGGGCAGGACGTA............................................................................................................201.000.00-------------------------------------------------1.00-------------------------------------
..........................................................................................TCTGGGACCCTGGCTCACAGGT................................................................2211.001.00-1.00-------------------------------------------------------------------------------------
....................................................................................................TGGCTCACAGGTAGCTTCCCCCG.....................................................231.000.00-------------------1.00-------------------------------------------------------------------
......................................................................................................GCTCACAGGTAGCTTCCCACGCAGT.................................................2511.001.00------------1.00--------------------------------------------------------------------------
.......................................................................TAGGTTGGGCATCGTGCTATC....................................................................................2111.001.00--1.00------------------------------------------------------------------------------------
..................................................GTCAGTGGGCAGGACCTGGGCTAGGTTGGGCATCGTGCTATCTGGGACCCTGGCTCACAGGTAGCTTCCCACGCAGA.................................................7711.009.001.00--------------------------------------------------------------------------------------
...............................................................ACCTGGGCTAGGTTGTTGC..............................................................................................191.000.00------------------------------------------------------------------------------------1.00--
........................................................................AGGTTGGGCATCGTGCTAT.....................................................................................1911.001.00----1.00----------------------------------------------------------------------------------
..................................................GTCAGTGGGCAGGACCTGAAA.........................................................................................................211.000.00---------1.00-----------------------------------------------------------------------------
..................................................GTCAGTGGGCAGGACCTGGGT.........................................................................................................2111.001.00----1.00----------------------------------------------------------------------------------
............................................................AGGACCTGGGCTAGGTTGGGCATC............................................................................................2411.001.00-----1.00---------------------------------------------------------------------------------
...................................................TCAGTGGGCAGGACCTGGGCTAGGTTGGGCATCGTGCTATCTGGGACCCTGGCTCACAGGTAGCTTCCCACGCA...................................................7411.001.001.00--------------------------------------------------------------------------------------
....................................................................................................TGGCTCACAGGTAGCTTCCCAAGC....................................................241.000.00---1.00-----------------------------------------------------------------------------------
......................................................................................................................................................TCCTTGGGTCATGTGCAGTACGATG.2511.001.00--------------------------------------------------------------------1.00------------------
.................................................................CTGGGCTAGGTTGGGCATCGTGCTATCTGGGACCCTGGCTCACAGGTAGCTTCCCACGCAGT.................................................621.000.001.00--------------------------------------------------------------------------------------
.....................................................................................................................................TGGGCAACCTGCGCTTCTCCTTGGGT.................2611.001.00-------------------------------------------------------------------1.00-------------------
..................................................GTCAGTGGGCAGGACCTGGGCTAGGTTGGGCATCGTGCTATCTGGGACCCTGGCTCACAGGTAGCTTCCCACGCAGATT...............................................7911.009.001.00--------------------------------------------------------------------------------------
............................................................................................................................................................GGTCATGTGCAGTACGAT..1811.001.00---------------1.00-----------------------------------------------------------------------
........................................................................................................TCACAGGTAGCTTCCCACGCAGATT...............................................251.000.00--1.00------------------------------------------------------------------------------------
........................................................................AGGTTGGGCATCGTGT........................................................................................161.000.00----------------------1.00----------------------------------------------------------------
..................................................GTCAGTGGGCAGGACCTGGGCTAGGTTGGGCATCGTGCTATCTGGGACCCTGGCTCACAGGTAGCTTCCCACGCACG.................................................7711.001.001.00--------------------------------------------------------------------------------------
...................................................TCAGTGGGCAGGACCTGGGCTAAA.....................................................................................................241.000.00------------------1.00--------------------------------------------------------------------
.....................................................................................TGCTATCTGGGACCCTGGC........................................................................1911.001.00-----1.00---------------------------------------------------------------------------------
...............................................................................................................................................GCGCTTCTCCTTGGGTCA...............1811.001.00---------------------------------------------------------------------------1.00-----------
....................................................................................................................................ATGGGCAACCTGCGCTTCTCCTTGGGTC................2811.001.00------------------------------------------1.00--------------------------------------------
.....................................................................................................................................TGGGCAACCTGCGCTTAAG........................191.000.00----------------------------------------------------------------------1.00----------------
...................................................TCAGTGGGCAGGACCTGGGCTAA......................................................................................................231.000.00------1.00--------------------------------------------------------------------------------
...........................................................................................CTGGGACCCTGGCTCAGC...................................................................181.000.00----------------------------------------------------------------------------1.00----------
...................................................TCAGTGGGCAGGACCTGGGCTAGAAT...................................................................................................261.000.00--------------------------1.00------------------------------------------------------------
..................................................GTCAGTGGGCAGGACCTGGGCTAGGTTGGGCATCGTGCTATCTGGGACCCTGGCTCACAGGTAGCTTCCCACGCAGG.................................................7711.001.001.00--------------------------------------------------------------------------------------
......................................................................................................GCTCACAGGTAGCTTCCCACGCAG..................................................2411.001.00-1.00-------------------------------------------------------------------------------------
..................................................................................TCGTGCTATCTGGGACCCTGGC........................................................................2211.001.00-------------------------------------------------------------------------------1.00-------
............................AGATGCTTTGCCTGAGTTCACGGT............................................................................................................................2411.001.00----1.00----------------------------------------------------------------------------------
........................................................................................................TCACAGGTAGCTTCCCACGCAT..................................................221.000.00------------------------------------------------------------------------------1.00--------
............................................................AGGACCTGGGCTAGGTTGGG................................................................................................2011.001.00-----------------------------------------------------------------------------1.00---------
..................................................................TGGGCTAGGTTGGGCAT.............................................................................................1711.001.00--1.00------------------------------------------------------------------------------------
...................................................TCAGTGGGCAGGACCTGGGCTAGGTTGGGCATCGTGCTATCTGGGACCCTGGCTCACAGGTAGCTTCCCACGCT...................................................741.000.001.00--------------------------------------------------------------------------------------
...........................................................................................................CAGGTAGCTTCCCACGCAG..................................................1911.001.00---1.00-----------------------------------------------------------------------------------
......................................................................................................................................................TCCTTGGGTCATGTGCAGTACGATGG2611.001.00--------------------------------------------------------------1.00------------------------
...................................................TCAGTGGGCAGGACCTGGGCTAT......................................................................................................231.000.00----------------------------------------1.00----------------------------------------------
........................................................GGGCAGGACCTGGGCCTG......................................................................................................181.000.00-------------------------------------------------------------------------1.00-------------
...................................................TCAGTGGGCAGGACCTGGGCTAGT.....................................................................................................241.000.00-------------------------1.00-------------------------------------------------------------
...................................................TCAGTGGGCAGGACCTC............................................................................................................171.000.00----------------------1.00----------------------------------------------------------------
....................................................................................GTGCTATCTGGGACCCTGGC........................................................................2011.001.00-1.00-------------------------------------------------------------------------------------
.....................................................AGTGGGCAGGACCTGGGCTATAAA...................................................................................................241.000.00---------------1.00-----------------------------------------------------------------------
........................................................................................................TCACAGGTAGCTTCCCACGCAGA.................................................231.000.00-----------------------------------------------------------------------1.00---------------
.............................................................GGACCTGGGCTAGGTTGGGCA..............................................................................................2120.500.50-0.50-------------------------------------------------------------------------------------

Antisense strand
CACATCCCCATGCCCTCCGAGAGGCTCCAGATGCTTTGCCTGAGTTCACGGTCAGTGGGCAGGACCTGGGCTAGGTTGGGCATCGTGCTATCTGGGACCCTGGCTCACAGGTAGCTTCCCACGCAGGTACAGATGGGCAACCTGCGCTTCTCCTTGGGTCATGTGCAGTACGATGG
.......................................................((((.((.((((((((((((((.(((.....)))......)))).)))))..)))))..)).)))).......................................................
.......................................................56....................................................................126................................................
SizePerfect hitTotal NormPerfect NormSRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
mjTestesWT1()
Testes Data. (testes)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
mjTestesWT4()
Testes Data. (testes)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
mjTestesWT2()
Testes Data. (testes)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR206941(GSM723282)
other. (brain)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR023847(GSM307156)
mESv6.5smallrna_rep1. (cell line)
mjTestesWT3()
Testes Data. (testes)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
SRR037920(GSM510458)
e12p5_rep2. (embryo)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR095855BC6(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR037906(GSM510442)
brain_rep3. (brain)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR077864(GSM637801)
18-30 nt small RNAs. (liver)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
SRR014237(GSM319961)
10 dpp MILI-KO total. (mili testes)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR206942(GSM723283)
other. (brain)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR037928(GSM510466)
e7p5_rep2. (embryo)
GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR037919(GSM510457)
e12p5_rep1. (embryo)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR014234(GSM319958)
Ovary total. (ovary)
SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)
SRR037932(GSM510470)
293cand4_rep1. (cell line)
SRR306539(GSM750582)
19-24nt. (ago2 brain)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR037933(GSM510471)
293cand4_rep2. (cell line)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR206939(GSM723280)
other. (brain)
SRR553582(SRX182788)
source: Brain. (Brain)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
GSM510454(GSM510454)
newborn_rep10. (total RNA)
SRR095855BC1(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)
.....................AGGCTCCAGATGCTTTGCCTGAGTTCA................................................................................................................................ 2711.001.00-----------------------------------------------------------------1.00---------------------
......CCCATGCCCTCCGA............................................................................................................................................................ 1480.120.12----------------------0.12----------------------------------------------------------------