ID: uc009pdf.14
GENE: Hyou1(15)
chr9:44195126-44195382+


(1)
AGO.mut 		(1)
AGO1.ip 		(8)
AGO2.ip 		(8)
B-CELL 		(26)
BRAIN 		(5)
CELL-LINE 		(2)
DCR.mut 		(2)
DGCR8.mut 		(9)
EMBRYO 		(5)
ESC 		(3)
FIBROBLAST 		(2)
KIDNEY 		(8)
LIVER 		(1)
LUNG 		(2)
LYMPH 		(15)
OTHER 		(8)
OTHER.mut 		(2)
PANCREAS 		(2)
PIWI.ip 		(1)
PIWI.mut 		(1)
SKIN 		(6)
SPLEEN 		(20)
TESTES 		(2)
THYMUS 		(1)
TOTAL-RNA 		(1)
UTERUS

Sense strand
ATTTGAGACCCTGGTGGAGGATAGCCCAGAGGAAGAATCTACTCTTACCAGTAAGATGAATATGGGCTCCTGTGTGCATGCAAGTGTGTGCCAGCAGGCAAGAGTCAGCACACACGCCTGCTTGAGGAGGTGATGGTGTTGATGTGGGGTAGGAGGTGGAGCGGCTGCCTGATTCCCTCATGAACCTCTCTGCTGCTTTCCTCCTAGAACTTGGCAACACCATATCCAGCCTGTTTGGAGGTGGTACCTCATCAGAT
.....................................................................................................................................................(((((((.((((((((.......(((......))).......)))))))))))))))...................................................
................................................................................................................................................145...........................................................207................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		mjTestesWT4()
Testes Data. (testes)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		mjLiverWT3()
Liver Data. (liver)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR206940(GSM723281)
other. (brain)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR206939(GSM723280)
other. (brain)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		GSM416732(GSM416732)
MEF. (cell line)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR059768(GSM562830)
Treg_control. (spleen)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR060845(GSM561991)
total RNA. (brain)		SRR206941(GSM723282)
other. (brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR073954(GSM629280)
total RNA. (blood)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR023847(GSM307156)
mESv6.5smallrna_rep1. (cell line)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (salivary gland)		GSM510455(GSM510455)
newborn_rep11. (total RNA)		SRR065049(SRR065049)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTGA.....................................................................................23177.0077.0022.00-7.00--4.003.002.002.001.005.00----1.00-4.00---3.00-1.00-1.001.00--------1.00----1.00-2.00------1.00---2.002.001.00-----------------1.00-1.00-1.001.00---------1.00---1.00----1.00-------1.00---1.00------1.00
..........................................................................................................................................................................................TCTCTGCTGCTTTCCTCCTAGT.................................................22146.004.0011.00----1.00---------1.001.00----1.00-1.002.00-1.00-1.00---3.00------1.00-1.00--1.00----1.002.002.00-----1.00--1.00-1.00---1.00-1.00-----1.00----------1.001.001.00---1.00---1.001.00------1.00--1.001.00---------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTGAT....................................................................................24113.0013.001.00-1.00----1.00-1.00---------------1.00-1.002.00---------------------------2.00------------------------1.00-------------------------------1.001.00--
..........................................................................................................................................................................................TCTCTGCTGCTTTCCTCCTAGA.................................................22111.0011.00-----------6.00------2.00---1.00-----------------------------------------1.00---------------------------------------1.00------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTGAA....................................................................................2419.0077.002.00-1.00--1.001.00--1.00---------------1.00-------1.00-1.00---------------------------------------------------------------------------------
..........................................................................................................................................................................................TCTCTGCTGCTTTCCTCCTAGC.................................................2216.004.002.00---------1.00-----------------------------------1.00------------------------------------1.00--------------------------1.00------
............................................................................................................................................................................................TCTGCTGCTTTCCTCCTAGA.................................................2016.006.00-------------5.00---1.00---------------------------------------------------------------------------------------------------
........................................................................................................TCAGCACACACGCCTGCTTGAGGAGGT..............................................................................................................................2716.006.00----6.00----------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTGAAT...................................................................................2515.0077.002.00-----1.00-----------------------2.00--------------------------------------------------------------------------------------
..........................................................................................................................................................................................TCTCTGCTGCTTTCCTCCTAGTT................................................2315.004.001.00-----------------------1.00-----------2.00------------------------------1.00-------------------------------------------------
....................................................................................................................................................GTAGGAGGTGGAGCGGCTGCCTGA.....................................................................................2415.005.00--1.00------1.00----------------1.00--------------1.00-------------1.00-------------------------------------------------------------
................................................................................................................................................TGGGGTAGGAGGTGGTG................................................................................................175.000.00---2.00----------1.00-------------------------------------------1.00------------------------------1.00---------------------------
................................................................................................................................................TGGGGTAGGAGGTGGTGT...............................................................................................184.000.00-1.00------------2.00-----1.00------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................TCTCTGCTGCTTTCCTCCTAG..................................................2114.004.003.00---------------------------------------------------------------------------------1.00----------------------------------
................................................................................................................................................TGGGGTAGGAGGTGGTAG...............................................................................................184.000.00-1.00------------1.00--------------------------------------------------1.00---------------------------------1.00-----------------
....GAGACCCTGGTGGAGGAT...........................................................................................................................................................................................................................................1814.004.00-------------------2.00-----------1.00--------------------1.00----------------------------------------------------------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTGT.....................................................................................2314.001.00------1.001.00--------------1.00----1.00-----------------------------------------------------------------------------------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTGAAA...................................................................................2513.0077.001.00------1.00--------------------------------1.00----------------------------------------------------------------------------
................................................................................................................................................TGGGGTAGGAGGTGGTAC...............................................................................................183.000.00-2.00------------------1.00------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................TCTCTGCTGCTTTCCTCCTAGTA................................................2313.004.00------------------3.00--------------------------------------------------------------------------------------------------
................................................................................................................................................TGGGGTAGGAGGTGGTTT...............................................................................................183.000.00-1.00-2.00-----------------------------------------------------------------------------------------------------------------
................................................................................................................................................TGGGGTAGGAGGTGGTATT..............................................................................................192.000.00-2.00-------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTGAAC...................................................................................2512.0077.002.00--------------------------------------------------------------------------------------------------------------------
...........................AGAGGAAGAATCTACTCTTACC................................................................................................................................................................................................................2212.002.00------------------------------------------------------------------------1.00-------------------------1.00------------------
..................................................GTAAGATGAATATGGGCTCCTGTGTGC....................................................................................................................................................................................2712.002.00---------------------------------------------1.00------------------------------------------------------------------1.00----
...........TGGTGGAGGATAGCCCAGAGGAA...............................................................................................................................................................................................................................2312.002.00------------------------------------------------2.00--------------------------------------------------------------------
............................................................................................................................................................................................TCTGCTGCTTTCCTCCTAGTAA...............................................222.000.002.00--------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................ACTTGGCAACACCATACCAA.............................202.000.00----------------------2.00----------------------------------------------------------------------------------------------
......................AGCCCAGAGGAAGAATCT.........................................................................................................................................................................................................................1812.002.00-------------------1.00-----------------1.00-------------------------------------------------------------------------------
....GAGACCCTGGTGGAGGATAGCCCAGAG..................................................................................................................................................................................................................................2712.002.00----2.00----------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTGG.....................................................................................2312.001.00-------1.00-------------------------------1.00-----------------------------------------------------------------------------
................................................................................................................................................TGGGGTAGGAGGTGGAAT...............................................................................................182.000.00-1.00------------1.00------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................TCTGCTGCTTTCCTCCTAGTT................................................211.000.001.00--------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................GTGGGGTAGGAGGTGGAGC...............................................................................................1911.001.00----------------------------------------------------------------------------------------------1.00----------------------
................................................................................................................................................TGGGGTAGGAGGTGGTGC...............................................................................................181.000.00-1.00-------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................ATCCAGCCTGTTTGGAGGTGGT............2211.001.00----------------------------------------------------1.00----------------------------------------------------------------
......................................................................................................................................................AGGAGGTGGAGCGGCTGCCTG......................................................................................2111.001.00---------1.00-----------------------------------------------------------------------------------------------------------
...........................................................................................................................GAGGAGGTGATGGTGGAC....................................................................................................................181.000.00-1.00-------------------------------------------------------------------------------------------------------------------
................................................................................................................................................TGGGGTAGGAGGTGGTTTG..............................................................................................191.000.00----------------------------------------------------------1.00----------------------------------------------------------
................................................................................................................................................TGGGGTAGGAGGTGGTGCA..............................................................................................191.000.00-1.00-------------------------------------------------------------------------------------------------------------------
.................................................................................................................ACGCCTGCTTGAGGAGGTGATGG.........................................................................................................................2311.001.00------------------------------------------------------------------------------------------------------1.00--------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTGAGT...................................................................................2511.0077.00--------1.00------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................GCCTGTTTGGAGGTGGTAC..........1911.001.00--------------------------------------------------------------------------------1.00------------------------------------
........................................................................................................................................................................................................................................GTTTGGAGGTGGTACCTCA......1911.001.00------------------------------------------------------------------------------------------------------------1.00--------
....................................................................................................................................................GTAGGAGGTGGAGCGGCTGCCTGT.....................................................................................241.000.00-----------------------------------------------------------------------1.00---------------------------------------------
................................................................................................................CACGCCTGCTTGAGGAG................................................................................................................................1711.001.00--------------------------------------1.00------------------------------------------------------------------------------
................................................................................................................................................TGGGGTAGGAGGTGGAATGG.............................................................................................201.000.00------------1.00--------------------------------------------------------------------------------------------------------
................................................................................................................................................TGGGGTAGGAGGTGGTATA..............................................................................................191.000.00-1.00-------------------------------------------------------------------------------------------------------------------
................................................................................................................................................TGGGGTAGGAGGTGGTCGC..............................................................................................191.000.00------------1.00--------------------------------------------------------------------------------------------------------
....................................................................................................................................................GTAGGAGGTGGAGCGGCTGCCTGAT....................................................................................2511.001.00-----------------------------1.00---------------------------------------------------------------------------------------
................GAGGATAGCCCAGAGGAAGAATCTACT......................................................................................................................................................................................................................2711.001.00--------1.00------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTGC.....................................................................................2311.001.00------1.00--------------------------------------------------------------------------------------------------------------
................................................................................................................................................TGGGGTAGGAGGTGGTTTT..............................................................................................191.000.00---1.00-----------------------------------------------------------------------------------------------------------------
................................................................................................................................................TGGGGTAGGAGGTGGAATAG.............................................................................................201.000.00-1.00-------------------------------------------------------------------------------------------------------------------
.TTTGAGACCCTGGTGGAGGATAGCCCAT....................................................................................................................................................................................................................................2811.001.00-----------------------------1.00---------------------------------------------------------------------------------------
................................................................................................................................................TGGGGTAGGAGGTGGTGGG..............................................................................................191.000.00--------------------1.00------------------------------------------------------------------------------------------------
............................................................................................................................................................................................TCTGCTGCTTTCCTCCTAGT.................................................201.000.001.00--------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTG......................................................................................2211.001.00---------1.00-----------------------------------------------------------------------------------------------------------
......................................................................................................................................................AGGAGGTGGAGCGGCTGGAA.......................................................................................201.000.00-------------------------------------------1.00-------------------------------------------------------------------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCT.......................................................................................2111.001.00-------------------------------------------------------------------------------1.00-------------------------------------
......................AGCCCAGAGGAAGAATCTACTCTT...................................................................................................................................................................................................................2411.001.00-------------------1.00-------------------------------------------------------------------------------------------------
................................................................................................................................................................GCGGCTGCCTGATTCAGCC..............................................................................191.000.00------------1.00--------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................TGTTTGGAGGTGGTAGGTC.......191.000.00--------------------1.00------------------------------------------------------------------------------------------------
....................................................................................................................................................GTAGGAGGTGGAGCGGCTGCCTGGT....................................................................................251.000.00---------------------------------------------------------------1.00-----------------------------------------------------
.................................................................................................................................GTGATGGTGTTGATGTGGGGTAGG........................................................................................................2411.001.00---------------------------------------------------------------------------------------------------------------1.00-----
.......................................................................................................................................................................................ACCTCTCTGCTGCTTTCCTCCT....................................................2211.001.00----------------------------------------------------------------------1.00----------------------------------------------
..TTGAGACCCTGGTGGAGGATA..........................................................................................................................................................................................................................................2111.001.00----------------------------------------------1.00----------------------------------------------------------------------
............................GAGGAAGAATCTACTCTTACCA...............................................................................................................................................................................................................2211.001.00---------------------------------1.00-----------------------------------------------------------------------------------
................................................................................................................................................TGGGGTAGGAGGTGGTGTA..............................................................................................191.000.00-1.00-------------------------------------------------------------------------------------------------------------------
.......................GCCCAGAGGAAGAATCTA........................................................................................................................................................................................................................1811.001.00-----------------------------------------------------------1.00---------------------------------------------------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTTAA....................................................................................2411.001.00---------------------------1.00-----------------------------------------------------------------------------------------
.....................TAGCCCAGAGGAAGAATCTACTCTTA..................................................................................................................................................................................................................2611.001.00------------------------------------------------------------------------------------------1.00--------------------------
............................GAGGAAGAATCTACTCTTA..................................................................................................................................................................................................................1911.001.00-------------------------------1.00-------------------------------------------------------------------------------------
................................................................................................................................................TGGGGTAGGAGGTGGTAGG..............................................................................................191.000.00-1.00-------------------------------------------------------------------------------------------------------------------
..................................................GTAAGATGAATATGGGCTCCTGTGT......................................................................................................................................................................................2511.001.00--------------------------------------1.00------------------------------------------------------------------------------
................................................................................................................................................TGGGGTAGGAGGTGGTTGC..............................................................................................191.000.00---1.00-----------------------------------------------------------------------------------------------------------------
................................................................................................................................................TGGGGTAGGAGGTGGTTGG..............................................................................................191.000.00---1.00-----------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................ATCCAGCCTGTTTGGAGGT...............1911.001.00---------------1.00-----------------------------------------------------------------------------------------------------
........................................................................................................................................................................................CCTCTCTGCTGCTTTCCTCCTAGC.................................................241.000.00--------------------------------------------1.00------------------------------------------------------------------------
..........CTGGTGGAGGATAGCCCAGAGGAAGAATCTAC.......................................................................................................................................................................................................................3211.001.00---------------------------------------------------------------------------------------------1.00-----------------------
..TTGAGACCCTGGTGGAGGATAGCCCA.....................................................................................................................................................................................................................................2611.001.00--------1.00------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTATT....................................................................................2411.001.00------------------------------1.00--------------------------------------------------------------------------------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTTA.....................................................................................2311.001.00--1.00------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTTT.....................................................................................2311.001.00-----1.00---------------------------------------------------------------------------------------------------------------
.............GTGGAGGATAGCCCACTG..................................................................................................................................................................................................................................181.000.00---1.00-----------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTGATTTTT................................................................................2811.001.001.00--------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTGTA....................................................................................2411.001.00-----------------------------------------------1.00---------------------------------------------------------------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTGATTAT.................................................................................2711.001.00-------------------------------------------------------------------------------------------------------------------1.00-
................................................................................................................................................TGGGGTAGGAGGTGGTGTC..............................................................................................191.000.00-1.00-------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCAAT.....................................................................................231.000.001.00--------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................TCTGCTGCTTTCCTCCTAGTA................................................211.000.001.00--------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................ATGTGGGGTAGGAGGTGGAGCGG.............................................................................................2311.001.00-------------------------------------------------------------1.00-------------------------------------------------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTA......................................................................................2211.001.00-----------------------------------------------------------------------------------------------------1.00---------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTGAGTT..................................................................................2611.0077.00-----------------------1.00---------------------------------------------------------------------------------------------
..................................................GTAAGATGAATATGGGCTCCTGTG.......................................................................................................................................................................................2411.001.00---------------------------------------------1.00-----------------------------------------------------------------------
...TGAGACCCTGGTGGAGGA............................................................................................................................................................................................................................................1811.001.00---------------------------------------------------------1.00-----------------------------------------------------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTGTAG...................................................................................2511.001.00----------------------------------1.00----------------------------------------------------------------------------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTGATT...................................................................................2511.001.00-----------------------------------------------1.00---------------------------------------------------------------------
..........................................................................................................................................................................................TCTCTGCTGCTTTCCTCCTATT.................................................2211.001.00----------------------------------------------------------------------------1.00----------------------------------------
...TGAGACCCTGGTGGAGGATAGCC.......................................................................................................................................................................................................................................2311.001.00--------1.00------------------------------------------------------------------------------------------------------------
..............................................................TGGGCTCCTGTGTGCATG.................................................................................................................................................................................1811.001.00---1.00-----------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTTAT....................................................................................2411.001.00-------------------------------------------1.00-------------------------------------------------------------------------
.TTTGAGACCCTGGTGGAGGATAGCCCA.....................................................................................................................................................................................................................................2711.001.00-----------------------------1.00---------------------------------------------------------------------------------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTGAAAAA.................................................................................2711.0077.00------------------------------------------------------------------------------------1.00--------------------------------
..........................................................................................................................................................................................TCTCTGCTGCTTTCCTCCTA...................................................2011.001.00----------------------------------1.00----------------------------------------------------------------------------------
................................................................................................................................................TGGGGTAGGAGGTGGTGCG..............................................................................................191.000.00-1.00-------------------------------------------------------------------------------------------------------------------
......................................................................................................................TGCTTGAGGAGGTGATGGTGTTGATGT................................................................................................................2711.001.00----------------------------------------------------------------------------------------------------1.00----------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGCCTGATTTGT................................................................................2811.001.001.00--------------------------------------------------------------------------------------------------------------------
................................................................................................................................................TGGGGTAGGAGGTGGTGTG..............................................................................................191.000.00------------1.00--------------------------------------------------------------------------------------------------------
.....................................................................................................................................................TAGGAGGTGGAGCGGCTGAA........................................................................................201.000.001.00--------------------------------------------------------------------------------------------------------------------
................................................................................................................................................TGGGGTAGGAGGTGGAATCT.............................................................................................201.000.00-1.00-------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................GTTTGGAGGTGGTACCTTT......191.000.00---------------------------------------------------------------------1.00-----------------------------------------------
..........................................................................................................................................................................................TCTCTGCTGCTTTCCTCCT....................................................1920.500.500.50--------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................AGGTGGAGCGGCTGCC........................................................................................1630.330.33---0.33-----------------------------------------------------------------------------------------------------------------

Antisense strand
ATTTGAGACCCTGGTGGAGGATAGCCCAGAGGAAGAATCTACTCTTACCAGTAAGATGAATATGGGCTCCTGTGTGCATGCAAGTGTGTGCCAGCAGGCAAGAGTCAGCACACACGCCTGCTTGAGGAGGTGATGGTGTTGATGTGGGGTAGGAGGTGGAGCGGCTGCCTGATTCCCTCATGAACCTCTCTGCTGCTTTCCTCCTAGAACTTGGCAACACCATATCCAGCCTGTTTGGAGGTGGTACCTCATCAGAT
.....................................................................................................................................................(((((((.((((((((.......(((......))).......)))))))))))))))...................................................
................................................................................................................................................145...........................................................207................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		mjTestesWT4()
Testes Data. (testes)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		mjLiverWT3()
Liver Data. (liver)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR206940(GSM723281)
other. (brain)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR206939(GSM723280)
other. (brain)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		GSM416732(GSM416732)
MEF. (cell line)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR059768(GSM562830)
Treg_control. (spleen)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR060845(GSM561991)
total RNA. (brain)		SRR206941(GSM723282)
other. (brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR073954(GSM629280)
total RNA. (blood)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR023847(GSM307156)
mESv6.5smallrna_rep1. (cell line)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (salivary gland)		GSM510455(GSM510455)
newborn_rep11. (total RNA)		SRR065049(SRR065049)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
...........................................................................................................................................TGATGTGGGGTAGGAGAC.................................................................................................... 181.000.00------------1.00--------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................TATCCAGCCTGTTTGAGT................. 181.000.00-------1.00-------------------------------------------------------------------------------------------------------------