ID: uc009ntb.13
GENE: 2310061F22Rik(16)
chr8:125010794-125010959-


(2)
AGO1.ip 		(2)
AGO2.ip 		(1)
AGO3.ip 		(7)
B-CELL 		(7)
BRAIN 		(3)
CELL-LINE 		(2)
DCR.mut 		(7)
EMBRYO 		(11)
ESC 		(7)
FIBROBLAST 		(1)
HEART 		(1)
KIDNEY 		(4)
LIVER 		(2)
LUNG 		(1)
LYMPH 		(15)
OTHER 		(6)
OTHER.mut 		(3)
PIWI.ip 		(2)
PIWI.mut 		(3)
SKIN 		(5)
SPLEEN 		(17)
TESTES 		(2)
THYMUS 		(2)
UTERUS

Sense strand
TCCCGAGGCCTAGCAAGCGCTTTTGGATGACAGCTATCGTCTTCACTGAGGTGGGTAGCAGCTTGTAGGGTAGGGGCTGGGCCACATGGCCCATGGCTGAGTGCCCTGTCCTGCAGGTCATGGTGGTCACCAAATACCTGTTCCAGTTCGGCTTCTTCCCCTGGAA
...............................................................((((((..(((((((.(((((.........))))).))).))))..))))))...................................................
.........................................................58........................................................116................................................
SizePerfect hitTotal NormPerfect NormSRR390298(GSM849856)
cell line: NIH-3T3cell type: fibroblastinfect. (fibroblast)		SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR073954(GSM629280)
total RNA. (blood)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR059765(GSM562827)
DN3_control. (thymus)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)		mjTestesWT2()
Testes Data. (testes)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		mjLiverWT3()
Liver Data. (liver)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR037928(GSM510466)
e7p5_rep2. (embryo)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)		SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR073955(GSM629281)
total RNA. (blood)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)		SRR059774(GSM562836)
MEF_control. (MEF)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
..............................................................TTGTAGGGTAGGGGCTGGG.....................................................................................192162.00162.00161.00---0.50--0.50---------------------------------------------------------------------------------------
.................................CTATCGTCTTCACTGAG....................................................................................................................17129.0029.00----4.00--3.002.00-1.001.00--6.001.00--2.00-1.00-----1.003.00--------1.00-----------------------------------1.00-------------1.00-1.00------
..............................................................TTGTAGGGTAGGGGCTGGGCCA..................................................................................22115.0015.00---1.00-1.00-----------------3.00----2.00---2.001.00-----1.001.00----------1.00----------1.00------------------1.00-------------
................................GCTATCGTCTTCACTGAG....................................................................................................................18114.0014.00-----1.00--2.00-5.001.00---1.00----2.00-----1.00--------------------------------------------------------------1.00-----
......................................................................................................................................TACCTGTTCCAGTTCGGCTTCTTCCCCTGT..3010.000.00-10.00---------------------------------------------------------------------------------------------
..............................................................TTGTAGGGTAGGGGCTGGGCC...................................................................................2118.008.00--2.002.001.00----2.00----------------------------------1.00--------------------------------------------------
..............AAGCGCTTTTGGATGACAGCTATCGTCTT...........................................................................................................................2917.007.00---7.00-------------------------------------------------------------------------------------------
...............................................................TGTAGGGTAGGGGCTGGGCCA..................................................................................2115.005.00-----1.00----------1.00-------------1.00------------------------------------------1.00-----------------1.00---
...............................................................TGTAGGGTAGGGGCTGGGCC...................................................................................2015.005.00--1.00----2.00-------------------------------------------------------------1.001.00------------------------
................................................................................................CTGAGTGCCCTGTCCTGCAGT.................................................215.000.00-5.00---------------------------------------------------------------------------------------------
...............................................................TGTAGGGTAGGGGCTGGGCCAT.................................................................................2215.005.00--3.00-------------1.00-----------------------------------------------------------1.00------------------
...............................................................TGTAGGGTAGGGGCTGGGCCATA................................................................................2314.005.00-------------3.00---------------------------1.00-----------------------------------------------------
.................................................................TAGGGTAGGGGCTGGGCCA..................................................................................1914.004.00-----3.00-------------------------------------------------1.00---------------------------------------
...............................................................TGTAGGGTAGGGGCTGGGCCAA.................................................................................2214.005.00--1.00-------------------------1.00--2.00---------------------------------------------------------------
...............................................................TGTAGGGTAGGGGCTGGG.....................................................................................1823.003.00-------1.00----------0.50----------0.50--------------0.500.50-------------------------------------------------
..................................................................................CACATGGCCCATGGCTGAGT................................................................2013.003.00-----------3.00-----------------------------------------------------------------------------------
............................................................................................ATGGCTGAGTGCCCTGTCCTGC....................................................2213.003.00-2.001.00--------------------------------------------------------------------------------------------
..............AAGCGCTTTTGGATGACAGCT...................................................................................................................................2112.002.00------------------------------------------2.00----------------------------------------------------
...............................................................TGTAGGGTAGGGGCTGGGCCT..................................................................................2112.005.00-------------1.00----------1.00----------------------------------------------------------------------
..........................................................................................................................................TGTTCCAGTTCGGCTAAA..........182.000.00-----------------------------------2.00-----------------------------------------------------------
...............................................................................................GCTGAGTGCCCTGTCCTGCAGT.................................................222.000.00--1.00-------------------------------1.00------------------------------------------------------------
.......................................................................AGGGGCTGGGCCACATGGCCC..........................................................................2112.002.00---------2.00-------------------------------------------------------------------------------------
..............................................................TTGTAGGGTAGGGGCTGAAA....................................................................................202.000.00-----2.00-----------------------------------------------------------------------------------------
...............................................................TGTAGGGTAGGGGCTGGGCCAAA................................................................................2312.005.00------2.00----------------------------------------------------------------------------------------
....................TTTTGGATGACAGCTATCG...............................................................................................................................1912.002.00--------2.00--------------------------------------------------------------------------------------
......................................................................................TGGCCCATGGCTGAGTGCCCTGTC........................................................2412.002.00------------------------------------1.00---------------------------1.00------------------------------
..............................................................TTGTAGGGTAGGGGCTGGGCA...................................................................................2122.001.50---------1.00-------------------------------------------------1.00-----------------------------------
...............................................................TGTAGGGTAGGGGCTGGGCCAAT................................................................................2312.005.00-----------------1.00--------------------------------------------------------------------------1.00--
..............................................................TTGTAGGGTAGGGGCTGGGC....................................................................................2021.501.50--0.50----------------------------------------------1.00---------------------------------------------
.................................................................TAGGGTAGGGGCTGGGCCG..................................................................................1911.001.00------1.00----------------------------------------------------------------------------------------
...............................................................TGTAGGGTAGGGGCTGGGCAT..................................................................................2121.001.00-------------------------------------1.00---------------------------------------------------------
..............................................................TTGTAGGGTAGGGGCTGGGCCAAAT...............................................................................2511.0015.00---------------------------------------------------------1.00-------------------------------------
...............................................................TGTAGGGTAGGGGCTGGGCCAATT...............................................................................2411.005.00-----------------------------------------------------------------------------1.00-----------------
.............................................................CTTGTAGGGTAGGGGCTGGGCCC..................................................................................231.000.00---------------------------------------------------------------------------------------------1.00-
..............................................................TTGTAGGGTAGGGGCTGGAC....................................................................................201.000.00----------------------1.00------------------------------------------------------------------------
..............................CAGCTATCGTCTTCACTGAG....................................................................................................................2011.001.00-------------1.00---------------------------------------------------------------------------------
...............................................................TGTAGGGTAGGGGCTGGGC....................................................................................1921.001.00-------------------------------------------0.50--------------------------------------------------0.50
..........TAGCAAGCGCTTTTGGATGACAGCTA..................................................................................................................................2611.001.00--------------------------------------------------------1.00--------------------------------------
...............................................................................................................................CACCAAATACCTGTTCCA.....................1811.001.00--------------------------1.00--------------------------------------------------------------------
..............................................................TTGTAGGGTAGGGGCTGGGAAA..................................................................................2221.00162.00------------------1.00----------------------------------------------------------------------------
................................................................................................CTGAGTGCCCTGTCCTGCAGTT................................................221.000.00----------------------------------------1.00------------------------------------------------------
.................................................................TAGGGTAGGGGCTGGGCC...................................................................................1811.001.00---------------1.00-------------------------------------------------------------------------------
.......................TGGATGACAGCTATCGTCTTCACTGAG....................................................................................................................2711.001.00---------------------------------------1.00-------------------------------------------------------
............................................................................................ATGGCTGAGTGCCCTGTCCTGCAGT.................................................2511.001.00-------------------------------------------1.00---------------------------------------------------
..............................................................TTGTAGGGTAGGGGCTGGGTATA.................................................................................2321.00162.00----1.00------------------------------------------------------------------------------------------
....................................................GGGTAGCAGCTTGTAGGGTAGGGGCTGTG.....................................................................................291.000.00------------------------1.00----------------------------------------------------------------------
...............................................................TGTAGGGTAGGGGCTGGGAAAA.................................................................................2221.003.00------1.00----------------------------------------------------------------------------------------
..................................................GTGGGTAGCAGCTTGTAGGGTAGGGGCTGGGCCACATGGCCCATGGCTGAGTGCCCTGTCCTG.....................................................6311.001.00--------------------------------------------------------------------------------1.00--------------
..................................................GTGGGTAGCAGCTTGTAGG.................................................................................................1911.001.00----------------------1.00------------------------------------------------------------------------
.....................TTTGGATGACAGCTATC................................................................................................................................1711.001.00--------------------------------------1.00--------------------------------------------------------
..............................................................TTGTAGGGTAGGGGCTGGGCCACA................................................................................2411.001.00----------------------------------------------------------1.00------------------------------------
..............................................................TTGTAGGGTAGGGGCTGGGCCT..................................................................................2211.008.00------------------------------------------------------------1.00----------------------------------
..............................................................TTGTAGGGTAGGGGCTGGGCCATTT...............................................................................2511.0015.00------1.00----------------------------------------------------------------------------------------
............................................................................................ATGGCTGAGTGCCCTGTCCTGCA...................................................2311.001.00--------------------------------------------------------------------------1.00--------------------
..............................................................TTGTAGGGTAGGGGCTGGGCCAA.................................................................................2311.0015.00--1.00--------------------------------------------------------------------------------------------
.............................................................CTTGTAGGGTAGGGGCTGGGCCT..................................................................................231.000.00-----------------1.00-----------------------------------------------------------------------------
...........................TGACAGCTATCGTCTTCACTGAGGT..................................................................................................................2511.001.00--1.00--------------------------------------------------------------------------------------------
.................................................................................................................................CCAAATACCTGTTCCAGTT..................1911.001.00-----------1.00-----------------------------------------------------------------------------------
...............................................................TGTAGGGTAGGGGCTGGGGCAA.................................................................................2221.003.00--1.00--------------------------------------------------------------------------------------------
.............................ACAGCTATCGTCTTCACTGA.....................................................................................................................2011.001.00------------------------------------------------------1.00----------------------------------------
...............................................................TGTAGGGTAGGGGCTGGGCCATTTT..............................................................................2511.005.00-------------------------1.00---------------------------------------------------------------------
.......................TGGATGACAGCTATCGTCTTCACTG......................................................................................................................2511.001.00---------------------------------------------------------------------------------------1.00-------
..............................................................TTGTAGGGTAGGGGCTGGGCCATTTT..............................................................................2611.0015.00------------------------------------------------------------------------------------------1.00----
...............................................................TGTAGGGTAGGGGCTGGGCCAG.................................................................................2211.005.00----1.00------------------------------------------------------------------------------------------
...............................................................TGTAGGGTAGGGGCTGGGCATT.................................................................................2221.001.00------1.00----------------------------------------------------------------------------------------
...............................................................TGTAGGGTAGGGGCTGGGCCAAAA...............................................................................2411.005.00-----------------1.00-----------------------------------------------------------------------------
.........................................................................................CCCATGGCTGAGTGCCCTGTCCTGCAGAA................................................291.000.00---------1.00-------------------------------------------------------------------------------------
..............................................................TTGTAGGGTAGGGGCTGGGCATAT................................................................................2421.001.50-------------------------1.00---------------------------------------------------------------------
............................................................................................ATGGCTGAGTGCCCTGTCCTGCT...................................................2311.003.00--------------------------------------------------------------------1.00--------------------------
..................................................GTGGGTAGCAGCTTGTAGGGTAGTGGC.........................................................................................271.000.00---------------------------------------------------------------------------1.00-------------------
..............................................................TTGTAGGGTAGGGGCTGGGCCAAT................................................................................2411.0015.00-----------------1.00-----------------------------------------------------------------------------
...........................................................AGCTTGTAGGGTAGGCTTT........................................................................................191.000.00----------------------1.00------------------------------------------------------------------------
...............................................................TGTAGGGTAGGGGCTGGGCCATT................................................................................2311.005.00--1.00--------------------------------------------------------------------------------------------
..............................................................................................GGCTGAGTGCCCTGTCCTACAT..................................................221.000.00----------------------------------1.00------------------------------------------------------------
.....................................................................................................................................ATACCTGTTCCAGTTCGGCTT............2111.001.00------------------------------1.00----------------------------------------------------------------
.............................................................CTTGTAGGGTAGGGGCTGGGCCAT.................................................................................241.000.00----1.00------------------------------------------------------------------------------------------
..............................................................TTGTAGGGTAGGGGCTGGGGC...................................................................................2121.00162.00-------------------------------------------------------------------1.00---------------------------
..................................................GTGGGTAGCAGCTTGTAGGGTAGGGG..........................................................................................2611.001.00------------------------------------------------1.00----------------------------------------------
........................................................................................................................TGGTGGTCACCAAATACCTGTTCCAGT...................2711.001.00-----------------------------------------------------------------------------------1.00-----------
..................................TATCGTCTTCACTGAG....................................................................................................................1611.001.00----1.00------------------------------------------------------------------------------------------
...............................................................TGTAGGGTAGGGGCTGGA.....................................................................................181.000.00--------------------------------------------------1.00--------------------------------------------
..................................................GTGGGTAGCAGCTTGTAGGGGAGA............................................................................................241.000.00-----------------------------------------1.00-----------------------------------------------------
......................................................................................................................................TACCTGTTCCAGTTCGGCT.............1911.001.00-----------------------------------------------------1.00-----------------------------------------
...............AGCGCTTTTGGATGACAGCTATCG...............................................................................................................................2411.001.00------------------------------------------------------------------------------1.00----------------
...............................................................TGTAGGGTAGGGGCTGGGCCAAAAA..............................................................................2511.005.00------1.00----------------------------------------------------------------------------------------
...................................................................................................................................................TCGGCTTCTTCCCCTGGA.1811.001.00-----------------------------------------------------------------1.00-----------------------------
...............................................................TGTAGGGTAGGGGCTGGGCTT..................................................................................2121.001.00-------------------------------------------------------------1.00---------------------------------
..............................................................................................GGCTGAGTGCCCTGTCCGGTT...................................................211.000.00-----------------------------1.00-----------------------------------------------------------------
..............................................................TTGTAGGGTAGGGGCTGGGCCATTAT..............................................................................2611.0015.00---------------------------------------------1.00-------------------------------------------------
...............................................................TGTAGGGTAGGGGCTGGGCCAC.................................................................................2211.001.00-------------------------1.00---------------------------------------------------------------------
.................................................................TAGGGTAGGGGCTGGGCCAT.................................................................................2011.004.00-------------------------------------------------------------------------------------1.00---------
..............................................................TTGTAGGGTAGGGGCTGGGCCAAAC...............................................................................2511.0015.00---------------------------------1.00-------------------------------------------------------------
..................................................................AGGGTAGGGGCTGGGCCACATGGCCCAT........................................................................2811.001.00------------------------1.00----------------------------------------------------------------------
..............................................................TTGTAGGGTAGGGGCTGGGCCAAA................................................................................2411.0015.00--1.00--------------------------------------------------------------------------------------------
........................................................AGCAGCTTGTAGGGTAGGGGCTGGGCC...................................................................................2711.001.00--------------------------------------1.00--------------------------------------------------------
..................GCTTTTGGATGACAGCTATCGTCT............................................................................................................................2411.001.00----------------------------------------------1.00------------------------------------------------
..............................................................TTGTAGGGTAGGGGCTGGGCCAT.................................................................................2311.0015.00--1.00--------------------------------------------------------------------------------------------
.........................................................GCAGCTTGTAGGGTAGGGGCTGGG.....................................................................................2411.001.00---------------1.00-------------------------------------------------------------------------------
..............................................................TTGTAGGGTAGGGGCTGTGC....................................................................................201.000.00----------------1.00------------------------------------------------------------------------------
..............................................................TTGTAGGGTAGGGGCTGGGCCATT................................................................................2411.0015.00--1.00--------------------------------------------------------------------------------------------
.............................................................CTTGTAGGGTAGGGGCTGGGCCAAT................................................................................251.000.00---------------------------------------------------------------1.00-------------------------------
............................................................................................ATGGCTGAGTGCCCTGTCCTA.....................................................211.000.00-----------------------------1.00-----------------------------------------------------------------
.............................................................CTTGTAGGGTAGGGGCTGGA.....................................................................................201.000.00-------------------------------------------------------------------------------1.00---------------
............................................................................................ATGGCTGAGTGCCCTGTCCTGCAG..................................................2411.001.00-----------------------------------------------------------------------1.00-----------------------
..............................................................TTGTAGGGTAGGGGCTGGGCCATAA...............................................................................2511.0015.00---------------1.00-------------------------------------------------------------------------------
...............................................................TGTAGGGTAGGGGCTGGGAAA..................................................................................2121.003.00-------------------------------------1.00---------------------------------------------------------
............................................................GCTTGTAGGGTAGGGGCTGGGC....................................................................................2211.001.00----------------1.00------------------------------------------------------------------------------
..................................................................AGGGTAGGGGCTGGGC....................................................................................1660.670.67-----0.67-----------------------------------------------------------------------------------------
.................................................................TAGGGTAGGGGCTGGGC....................................................................................1730.330.33----------------------------------------------0.33------------------------------------------------
.................................................................TAGGGTAGGGGCTGGGCAA..................................................................................1930.330.33-----------------------------------------------0.33-----------------------------------------------

Antisense strand
TCCCGAGGCCTAGCAAGCGCTTTTGGATGACAGCTATCGTCTTCACTGAGGTGGGTAGCAGCTTGTAGGGTAGGGGCTGGGCCACATGGCCCATGGCTGAGTGCCCTGTCCTGCAGGTCATGGTGGTCACCAAATACCTGTTCCAGTTCGGCTTCTTCCCCTGGAA
...............................................................((((((..(((((((.(((((.........))))).))).))))..))))))...................................................
.........................................................58........................................................116................................................
SizePerfect hitTotal NormPerfect NormSRR390298(GSM849856)
cell line: NIH-3T3cell type: fibroblastinfect. (fibroblast)		SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR073954(GSM629280)
total RNA. (blood)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR059765(GSM562827)
DN3_control. (thymus)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)		mjTestesWT2()
Testes Data. (testes)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		mjLiverWT3()
Liver Data. (liver)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR037928(GSM510466)
e7p5_rep2. (embryo)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)		SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR073955(GSM629281)
total RNA. (blood)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)		SRR059774(GSM562836)
MEF_control. (MEF)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
..............................................................................GGGCCACATGGCCCATGGCTGAGTG............................................................... 2514.004.00------------4.00----------------------------------------------------------------------------------
...................................................................................................................................................TCGGCTTCTTCCCCTCG.. 173.000.00-------------------3.00---------------------------------------------------------------------------
..................................................................................CACATGGCCCATGGCTGAGTGTCCC........................................................... 251.000.00------------1.00----------------------------------------------------------------------------------
...................................................................................................................................................TCGGCTTCTTCCCCTCGGG 191.000.00------------------------------------------------------------------------------------1.00----------
.........CTAGCAAGCGCTTTTA............................................................................................................................................. 161.000.00----------------------------------------------------------------------------------1.00------------
...................................................................................................................................................TCGGCTTCTTCCCCTCGTG 191.000.00----------------------------------------------------1.00------------------------------------------
...............................................................................GGCCACATGGCCCATGGCTGAGTGA.............................................................. 251.000.00------------1.00----------------------------------------------------------------------------------
....................................................................................................................................AATACCTGTTCCAGTTCGGCTTCT.......... 2411.001.00-------------1.00---------------------------------------------------------------------------------
................................................................................GCCACATGGCCCATGGTA.................................................................... 181.000.00------------------------------------------------------------------1.00----------------------------
....................................................................................................................................AATACCTGTTCCAGTTCGGCTTCTTC........ 2611.001.00---------------------1.00-------------------------------------------------------------------------
...CGAGGCCTAGCAAGCGCTA................................................................................................................................................ 191.000.00-----------------------------------------------1.00-----------------------------------------------
.............................................................................................TGGCTGAGTGCCCTGTCCTGCAGGTCAA............................................. 281.000.00---------------------1.00-------------------------------------------------------------------------
.........................................TTCACTGAGGTGGGTAGCAGCTTGTA................................................................................................... 2611.001.00---------------------1.00-------------------------------------------------------------------------
...................................................................................................................................................TCGGCTTCTTCCCC..... 1490.110.11-------------------0.11---------------------------------------------------------------------------