ID: uc009kgl.9
GENE: Tubgcp2(9)
chr7:147192010-147192259-


(1)
AGO1.ip
(9)
AGO2.ip
(1)
AGO3.ip
(1)
B-CELL
(25)
BRAIN
(3)
CELL-LINE
(1)
DCR.mut
(2)
DGCR8.mut
(8)
EMBRYO
(8)
ESC
(3)
FIBROBLAST
(1)
HEART
(1)
KIDNEY
(4)
LIVER
(10)
OTHER
(7)
OTHER.mut
(3)
PIWI.ip
(1)
PIWI.mut
(2)
SKIN
(2)
SPLEEN
(19)
TESTES
(4)
TOTAL-RNA
(1)
UTERUS

Sense strand
GTGTCTCTCCTGTGGCCATAATGGAAGAGTAGGGAGGAAGCTACTCAGCTGGGTCTCAAATGAGACACCTGCTCCCAAGTAAGGCTCAGTTGCTCAGCTCACAGTTGAGTGGTTGTGCAGGACGGTCCTGGAAGTATGTGGCCACACCAGAGTTGTCTGGGCTTGTGCTGTAGTGGCCTGAAACTCTGTGTGACTTACAGTGAGTTCATGGTGGAGGAACACGAGCTGCGGAAGGAGAAGATCCAGGAGG
........................................................................................................................................(((((.((((.(((((((.((.(((((...((....)))))))))))))))))))).)).)))...................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
mjLiverWT1()
Liver Data. (liver)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR206942(GSM723283)
other. (brain)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR206941(GSM723282)
other. (brain)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR206939(GSM723280)
other. (brain)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
mjTestesWT3()
Testes Data. (testes)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
GSM510453(GSM510453)
newborn_rep9. (total RNA)
SRR306539(GSM750582)
19-24nt. (ago2 brain)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR206940(GSM723281)
other. (brain)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)
mjTestesWT4()
Testes Data. (testes)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR553584(SRX182790)
source: Heart. (Heart)
SRR553586(SRX182792)
source: Testis. (testes)
GSM510452(GSM510452)
newborn_rep8. (total RNA)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR037938(GSM510476)
293Red. (cell line)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR037920(GSM510458)
e12p5_rep2. (embryo)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR553603(SRX182809)
source: Spermatids. (Spermatids)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
mjTestesWT2()
Testes Data. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR037912(GSM510449)
newborn_rep5. (total RNA)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR059774(GSM562836)
MEF_control. (MEF)
GSM361399(GSM361399)
CGNP_P6_p53--_Ink4c--_rep2. (brain)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
GSM361394(GSM361394)
CGNP_P6_wt_rep1. (brain)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
mjLiverWT3()
Liver Data. (liver)
..................................................................................................................................................................................TGAAACTCTGTGTGACTTACAGT.................................................23169.0069.004.009.004.006.004.007.00-4.00---2.001.002.00-2.002.00-1.002.00-1.00-1.001.00---3.00--------1.00--1.002.00--1.00---1.00-1.001.001.00---------------1.001.00------1.00-1.00-------------
..................................................................................................................................................................................TGAAACTCTGTGTGACTTACAG..................................................22135.0035.003.004.003.003.006.00--1.00---1.003.003.00--1.00-1.001.00-----1.00------------------1.00---------1.00-------1.00---------1.00-------------------
..................................................................................................................................................................................TGAAACTCTGTGTGACTTACA...................................................21117.0017.002.001.00--1.00--1.007.00--2.00----------1.00--------1.00-------1.00----------------------------------------------------
..................................................................................................................................................................................TGAAACTCTGTGTGACTTACAGC.................................................2318.0035.004.00-2.00------------------1.00-----------------1.00----------------------------------------------------
..................................................................................................................................................................................TGAAACTCTGTGTGACTTACAGA.................................................2318.0035.00--1.00--3.00---------1.00--1.00------1.001.00-----------------------------------------------------------------
.............................................................................................................................................CCACACCAGAGTTGTCTGGA.........................................................................................2017.001.00------7.00-------------------------------------------------------------------------------------
.................................................................................................................................................................................CTGAAACTCTGTGTGACTTACAGT.................................................2416.006.00--1.00---------------------1.00---------2.00----------------------------------------1.00-----------1.00----
..................................................................................................................................................................................TGAAACTCTGTGTGACTTACAGTA................................................2415.0069.001.001.001.00-1.00---------------1.00-----------------------------------------------------------------------
..........................................................................................................................................TGGCCACACCAGAGTTGTCTGGGC........................................................................................2415.005.001.00--------1.00----------1.00----1.00---------------------------------------1.00--------------------------
............................................................................................................................................................................................................................ACGAGCTGCGGAAGGAGAAT..........204.000.00--------------4.00-----------------------------------------------------------------------------
.................................................................................................................................................................................CTGAAACTCTGTGTGACTTACAG..................................................2314.004.00--1.001.00-----------1.00--------------------1.00-------------------------------------------------------
.......................................................................................................................................ATGTGGCCACACCAGAGTTGTCA............................................................................................233.000.00-------------------------------------1.00---------------1.00-----------------------1.00--------------
........................................................................................................................................TGTGGCCACACCAGAGTTGTCT............................................................................................2213.003.00-----------------1.00--1.00-----------1.00-----------------------------------------------------------
.................................................................................................................................................................................CTGAAACTCTGTGTGACTTACA...................................................2213.003.00------------------------------------------2.00------------------------------1.00------------------
.......................................................................................................................................ATGTGGCCACACCAGAGTTGTCT............................................................................................2313.003.00---------------------------2.00---------------1.00------------------------------------------------
..........................................................................................................................................TGGCCACACCAGAGTTGTCTGG..........................................................................................2213.003.001.00--------1.00---------------------------------------------------------------------1.00------------
........................................................................................................................................TGTGGCCACACCAGAGTTGTCTGGGAT.......................................................................................273.000.00----------3.00---------------------------------------------------------------------------------
..........................................................................................................................................TGGCCACACCAGAGTTGTCTGGG.........................................................................................2313.003.00------------------------1.00----1.00----------1.00---------------------------------------------------
..................................................................................................................................................................................TGAAACTCTGTGTGACTTAC....................................................2013.003.00---1.00-------------------1.00---------------------------------1.00----------------------------------
..................................................................................................................................................................................TGAAACTCTGTGTGACTTACAGTT................................................2413.0069.00--1.00-------------1.00---------------------------------------------------------1.00-----------------
........................................................................................................................................TGTGGCCACACCAGAGTTGTCTGG..........................................................................................2412.002.00--------------------------1.00----------------------------------------1.00------------------------
..........................................................................................................................................TGGCCACACCAGAGTTGTCTG...........................................................................................2112.002.00---1.00------------------------------------------1.00---------------------------------------------
........................................................................................................................................TGTGGCCACACCAGAGTTGTCG............................................................................................2212.002.00-----------------2.00--------------------------------------------------------------------------
.......................................................................................................................................................................................................................GGAACACGAGCTGCGGAAGGAGAAGATC.......2812.002.00---------------------------------1.00-------------1.00--------------------------------------------
........................................................................................................................................................................................................................GAACACGAGCTGCGGAAGGAGAAGA.........2512.002.00-------------------------------1.00----------------------------------1.00-------------------------
........................................................................................................................................TGTGGCCACACCAGAGTTGTC.............................................................................................2112.002.00--------------------------------------1.00--------------------------------1.00--------------------
.....................TGGAAGAGTAGGGAGTTTG..................................................................................................................................................................................................................192.000.00------------------------------1.00----1.00--------------------------------------------------------
........................................................................................................TTGAGTGGTTGTGCAGGACGGTCCTGGAAGTATGTGGCCACACCAGAGTTGTCTGGGCTTGTGCTGTAGTGGCCTGAAACTCTGTGTGACTTACAG..................................................9612.002.00---------------------------------------------2.00----------------------------------------------
.......................................................................................................................................ATGTGGCCACACCAGAGTTGTCTGG..........................................................................................2512.002.00---------1.00---------------------------------------------------1.00------------------------------
.................................................................................................................................................................................CTGAAACTCTGTGTGACTTAGAG..................................................231.000.001.00-------------------------------------------------------------------------------------------
.........................................................................................................................................GTGGCCACACCAGAGTTGTCTGGGC........................................................................................2511.001.00---------1.00----------------------------------------------------------------------------------
............................................................................................................................................................................................................................ACGAGCTGCGGAAGGT..............161.000.00----------1.00---------------------------------------------------------------------------------
......................................................................................................................................TATGTGGCCACACCAGAGTTGTC.............................................................................................2311.001.00-----------------------1.00--------------------------------------------------------------------
.......................................................................................................................................................................................................................GGAACACGAGCTGCGGAAGGAGAAGAT........2711.001.00---------------------------------1.00----------------------------------------------------------
.........................................................................................................................................GTGGCCACACCAGAGTTGTCT............................................................................................2111.001.00--------------------------------------------------------------------------------1.00-----------
..........................................................................................................................................TGGCCACACCAGAGTTGTCTGGGA........................................................................................2411.003.00-----------------------------1.00--------------------------------------------------------------
........................................................................................................................................TGTGGCCACACCAGAGTTGTCTGGCC........................................................................................2611.002.00----------1.00---------------------------------------------------------------------------------
...................................................................................................................................................................................................TACAGTGAGTTCATGGTGGAGGAACACG...........................2811.001.00------------------------------------------------------------1.00-------------------------------
.......................................................................................................................................ATGTGGCCACACCAGAGTTGTCTGT..........................................................................................251.000.00------------------1.00-------------------------------------------------------------------------
........................................................................................................................................TGTGGCCACACCAGAGTTGTCTGGGC........................................................................................2611.001.00----------------------------------------------------------------------------------------1.00---
............................................................................................................................................GCCACACCAGAGTTGTCTGGG.........................................................................................2111.001.00---------1.00----------------------------------------------------------------------------------
........................................................................................................................................TGTGGCCACACCAGAGTTGT..............................................................................................2011.001.00---1.00----------------------------------------------------------------------------------------
..................................................................................................................................................................................TGAAACTCTGTGTGACTTA.....................................................1911.001.00--------------------------------------1.00-----------------------------------------------------
........................................................................................................................................................................................................TGAGTTCATGGTGGAGGAACACGAGCTGCGGAAG................3411.001.00-------------------------------------------------1.00------------------------------------------
................................................................................................................................................................................CCTGAAACTCTGTGTGAAT.......................................................191.000.00---------------------1.00----------------------------------------------------------------------
........................................................................................................................................TGTGGCCACACCAGAGTTGTCA............................................................................................2211.002.00-------1.00------------------------------------------------------------------------------------
........................................................................................................................................TGTGGCCACACCAGAGTTGTCTGGTT........................................................................................2611.002.00-----------------------------1.00--------------------------------------------------------------
..............................................................................................................................................CACACCAGAGTTGTCTCAT.........................................................................................191.000.00--------------------------------------------------------------------------------------1.00-----
.....................TGGAAGAGTAGGGAGTATG..................................................................................................................................................................................................................191.000.00-----------------------------------1.00--------------------------------------------------------
......................................................................................................................................TATGTGGCCACACCAGAGTTGTCTGT..........................................................................................261.000.00--------------------------------1.00-----------------------------------------------------------
..........................................................................................................GAGTGGTTGTGCAGGGGC..............................................................................................................................181.000.00----------------------------------------------------------------------------------1.00---------
...................................................................................................................................................................................................................................GCGGAAGGAGAAGATGTG.....181.000.00--------------------------------------------------------1.00-----------------------------------
..................................................................................................................................................................................TGAAACTCTGTGTGACTTACGG..................................................2211.003.001.00-------------------------------------------------------------------------------------------
.........................................................................................................................................GTGGCCACACCAGAGTTGTCTCGGC........................................................................................2511.001.001.00-------------------------------------------------------------------------------------------
.............................................................................................................................................CCACACCAGAGTTGTCTGG..........................................................................................1911.001.00----------1.00---------------------------------------------------------------------------------
..........................................................................................................................................TGGCCACACCAGAGTTGTCTGA..........................................................................................2211.002.00-----------------1.00--------------------------------------------------------------------------
......................................................................................................................................................................................ACTCTGTGTGACTTACAG..................................................1821.001.00------------------------------------1.00-------------------------------------------------------
........................................................................................................................................TGTGGCCACACCAGAGTTGTCTG...........................................................................................2311.001.00-------------------------------------------1.00------------------------------------------------
.........................................................................................................................................................................................................................AACACGAGCTGCGGAAGGAGAAGATC.......2611.001.00----------------------------------------------------------------------1.00---------------------
..................................................................................................................................................................................................................................TGCGGAAGGAGAAGATCCAGG...2111.001.00-----------------------------------------------------------------------------------1.00--------
.....................TGGAAGAGTAGGGAGCTC...................................................................................................................................................................................................................181.000.00------------------------------1.00-------------------------------------------------------------
....................................................................................................................................................................................................ACAGTGAGTTCATGGTGGAGGAAC..............................2411.001.00-------------------------------------------------------1.00------------------------------------
............................................................................................................................................................................................................................ACGAGCTGCGGAAGGAGAATA.........211.000.00---------------------------------------------------------------1.00----------------------------
....................................................................................................................................................................................................................GGAGGAACACGAGCTGCGGAAGGA..............2411.001.00------------1.00-------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................GAGAAGATCCAGGAGGCGCT201.000.00---------1.00----------------------------------------------------------------------------------
..................................................................................................................................................................TTGTGCTGTAGTGGCCTGAAACTCTG..............................................................2611.001.00---------------------------1.00----------------------------------------------------------------
.......................................................................................................................................ATGTGGCCACACCAGAGTTGTCTGGAT........................................................................................2711.002.00----------------------------------------------------------------1.00---------------------------
...............................................................................................................................CTGGAAGTATGTGGCCACACCA.....................................................................................................2211.001.00----------------------1.00---------------------------------------------------------------------
............TGGCCATAATGGAAGAGTAGGGAGGAA...................................................................................................................................................................................................................2711.001.00----------------------------------------------------------1.00---------------------------------
................................................................................................................................................................................................................TGGTGGAGGAACACGAGC........................1820.500.50------------------------------------------------------------------------------------------0.50-
........................................................................................................................................................TTGTCTGGGCTTGTGC..................................................................................1620.500.50---0.50----------------------------------------------------------------------------------------
................................................................................................................................................................................CCTGAAACTCTGTGTGACTT......................................................2020.500.50----------------------------------------------0.50---------------------------------------------
...................................................................................................................TGCAGGACGGTCCT.........................................................................................................................1480.120.12------------------------------0.12-------------------------------------------------------------

Antisense strand
GTGTCTCTCCTGTGGCCATAATGGAAGAGTAGGGAGGAAGCTACTCAGCTGGGTCTCAAATGAGACACCTGCTCCCAAGTAAGGCTCAGTTGCTCAGCTCACAGTTGAGTGGTTGTGCAGGACGGTCCTGGAAGTATGTGGCCACACCAGAGTTGTCTGGGCTTGTGCTGTAGTGGCCTGAAACTCTGTGTGACTTACAGTGAGTTCATGGTGGAGGAACACGAGCTGCGGAAGGAGAAGATCCAGGAGG
........................................................................................................................................(((((.((((.(((((((.((.(((((...((....)))))))))))))))))))).)).)))...................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
mjLiverWT1()
Liver Data. (liver)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR206942(GSM723283)
other. (brain)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR206941(GSM723282)
other. (brain)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR206939(GSM723280)
other. (brain)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
mjTestesWT3()
Testes Data. (testes)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
GSM510453(GSM510453)
newborn_rep9. (total RNA)
SRR306539(GSM750582)
19-24nt. (ago2 brain)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR206940(GSM723281)
other. (brain)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)
mjTestesWT4()
Testes Data. (testes)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR553584(SRX182790)
source: Heart. (Heart)
SRR553586(SRX182792)
source: Testis. (testes)
GSM510452(GSM510452)
newborn_rep8. (total RNA)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR037938(GSM510476)
293Red. (cell line)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR037920(GSM510458)
e12p5_rep2. (embryo)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR553603(SRX182809)
source: Spermatids. (Spermatids)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)
SRR029039(GSM433291)
25dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
mjTestesWT2()
Testes Data. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR037912(GSM510449)
newborn_rep5. (total RNA)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR059774(GSM562836)
MEF_control. (MEF)
GSM361399(GSM361399)
CGNP_P6_p53--_Ink4c--_rep2. (brain)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
GSM361394(GSM361394)
CGNP_P6_wt_rep1. (brain)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
mjLiverWT3()
Liver Data. (liver)
...................................................................................................................................................................................................................................GCGGAAGGAGAAGATCATT.... 192.000.00---------------------------------------------------------------------------------1.00---1.00------
.........................................................................................................................................................................................................GAGTTCATGGTGGAGGGTG.............................. 191.000.00--------------------------1.00-----------------------------------------------------------------
..............................................................................................................................CCTGGAAGTATGTGGCCACAGA...................................................................................................... 221.000.00-----------------------------------------------------------1.00--------------------------------
.......................................GCTACTCAGCTGGGTGAAA................................................................................................................................................................................................ 191.000.00------------------------------------------------------------------------------------1.00-------
..........................................................................................................................CGGTCCTGGAAGTATGG............................................................................................................... 171.000.00----------------------1.00---------------------------------------------------------------------
...................................................................................................................................................CAGAGTTGTCTGGGCTTATT................................................................................... 201.000.00-----------------------------------------------------------------------------------------1.00--
.....................................................................................TCAGTTGCTCAGCTCA..................................................................................................................................................... 1640.250.25-------------------------------------------------------------------------------------------0.25