ID: uc009kfq.11
GENE: Inpp5a(11)
chr7:146760643-146760892+


(2)
AGO1.ip 		(8)
AGO2.ip 		(2)
AGO3.ip 		(18)
BRAIN 		(1)
CELL-LINE 		(1)
DCR.mut 		(1)
DGCR8.mut 		(5)
EMBRYO 		(4)
ESC 		(3)
FIBROBLAST 		(2)
HEART 		(2)
KIDNEY 		(8)
LIVER 		(1)
LUNG 		(14)
OTHER 		(9)
OTHER.mut 		(2)
OVARY 		(2)
PIWI.ip 		(1)
PIWI.mut 		(5)
SKIN 		(24)
TESTES 		(4)
TOTAL-RNA 		(2)
UTERUS

Sense strand
AGCCTGACGCATGCAATAATAGGTACATGCAGGGAGAATTAATTTTGATGGGGACACTTGGGTTTCAAGTTTGGCTTTCTATATTCTAGAAACCTCTCTGTGTGCACTCTTTCCTGGATAGCAGCACACCCTTCCCTTCAGAACTTGGAGGATTGCTGGAACCAGAGTCTAGCTAACACTTTGTTCCTGTGTCTCCACAGCTACCCGTACAGTGAGGACTCCAGCCAGGGAGAACAGTACATGAACACGA
.................................................................................................................................................((((((...((.((((.((((((.........)))))))))).)).)))))).....................................................
...........................................................................................................................................140.........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		mjLiverWT1()
Liver Data. (liver)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjTestesWT3()
Testes Data. (testes)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		mjLiverWT3()
Liver Data. (liver)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		mjTestesWT4()
Testes Data. (testes)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		GSM475280(GSM475280)
Mili-IP. (mili testes)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR553586(SRX182792)
source: Testis. (testes)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR553603(SRX182809)
source: Spermatids. (Spermatids)		SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR206940(GSM723281)
other. (brain)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjTestesWT2()
Testes Data. (testes)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR363958(GSM822760)
Adult-WTSmall RNA Miwi IP. (testes)		GSM475281(GSM475281)
total RNA. (testes)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR014234(GSM319958)
Ovary total. (ovary)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR037909(GSM510446)
newborn_rep2. (total RNA)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		GSM475279(GSM475279)
Miwi-IP. (miwi testes)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR206939(GSM723280)
other. (brain)		SRR038741(GSM527276)
small RNA-Seq. (brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes)		SRR095855BC8(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR037906(GSM510442)
brain_rep3. (brain)		SRR206941(GSM723282)
other. (brain)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
................................................................................................................................................TTGGAGGATTGCTGGAACCAGAGT..................................................................................241158.00158.0096.004.0013.006.00--3.003.001.005.00--1.001.001.00------3.00-1.001.00-1.001.00----1.001.00----2.001.001.00-2.00-1.00----1.00----1.00-------1.001.00-----1.00--1.00----1.00--1.00--------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAGA....................................................................................221118.00118.0054.0014.00-5.0014.008.002.00-4.003.00--2.00-2.00----------1.001.00-1.00----1.00-1.00---1.00---------------------1.00--------1.00----1.00--------------1.00----
................................................................................................................................................TTGGAGGATTGCTGGAACCAGAG...................................................................................231102.00102.0063.003.00---1.001.00-1.00---2.00--2.00-5.005.00----2.00-1.001.00-1.002.00-----1.00-2.001.00----1.00----------1.001.001.00-1.00-------1.00-----------1.00--------------1.00-
................................................................................................................................................TTGGAGGATTGCTGGAACCAGAGA..................................................................................24115.00102.0013.00-------------1.00-----------------------------------------------------------------------1.00--------
................................................................................................................................................TTGGAGGATTGCTGGAACCAGAGTT.................................................................................25112.00158.001.001.009.00---1.00----------------------------------------------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAG.....................................................................................21110.0010.007.00----1.00--2.00--------------------------------------------------------------------------------------
...............................................................................................................................................................................................................TACAGTGAGGACTCCAGCCAGGGAGAAC...............2816.006.00----------2.00--------1.00--1.00----------------------1.00---1.00---------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCA......................................................................................2015.005.001.001.00-----------------------------------------------------------------------------1.00---------1.00----1.00
................................................................................................................................................TTGGAGGATTGCTGGAAT........................................................................................185.000.00----------------5.00------------------------------------------------------------------------------
....................................................................................................................................................................................TTGTTCCTGTGTCTCCACAGA.................................................215.000.00------------------------3.00----------------------------------------------1.00------------1.00----------
.........................................................................................................................................................................................................TACCCGTACAGTGAGGACTCCAGCCAGG.....................2815.005.00----------1.00-------------------3.00-----1.00----------------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAGAA...................................................................................2315.00118.004.00----1.00-----------------------------------------------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAGAGTAA................................................................................2615.00158.004.00--1.00-------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTTGTTCCTGTGTCTCCACAGA.................................................224.000.002.001.00-------------------------1.00-------------------------------------------------------------------
.....................................................................................................................................................................................................................GAGGACTCCAGCCAGGGAGAACAGT............2514.004.00--------------2.00--------------------------2.00-----------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAGCGT..................................................................................2414.0010.00---------------------1.00----------1.00-----------1.00----------------------------------------------1.00---
...............................................................................................................................................................................................................TACAGTGAGGACTCCAGC.........................1814.004.00-------4.00---------------------------------------------------------------------------------------
.........................................................................................................................................................................................................TACCCGTACAGTGAGGACTCCAGCCAG......................2713.003.00-----------------------------------1.00----------1.00---------------------1.00--------------------------
.........................................................................................................................................................................................................TACCCGTACAGTGAGGACTCCAGCCAGGG....................2913.003.00----------3.00------------------------------------------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAGT....................................................................................2213.0010.001.001.00----1.00----------------------------------------------------------------------------------------
.................................................................................................................................................TGGAGGATTGCTGGAACCAGA....................................................................................2113.003.001.00--2.00-------------------------------------------------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAAC........................................................................................1813.003.00-1.00----1.00----------------------------------------1.00-----------------------------------------------
..............................................................................................................................................ACTTGGAGGATTGCTGGAACCAGA....................................................................................2413.003.001.00----------------------------------------------1.00---------------------------------------1.00-------
...................................................................................................................................................................................TTTGTTCCTGTGTCTCCACAGT.................................................223.000.00-1.00---------2.00-----------------------------------------------------------------------------------
...............................................................................................................................................................................................................TACAGTGAGGACTCCAGCCAGGGAGA.................2613.003.00-------2.00-----------1.00---------------------------------------------------------------------------
.....................................................................................................................................................................................................................GAGGACTCCAGCCAGGGAGAAC...............2213.003.00---------------2.00---------------------------1.00---------------------------------------------------
....................................................................................................................................................................................TTGTTCCTGTGTCTCCACAGT.................................................212.000.00-----------2.00-----------------------------------------------------------------------------------
...............................................................................................................................................CTTGGAGGATTGCTGGAACCAGA....................................................................................2312.002.00---1.00-------1.00-----------------------------------------------------------------------------------
.........................................................................................................................................................................................................TACCCGTACAGTGAGGACTCCAGCCAGGGATT.................322.000.00----------------------------------------------------2.00------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAGAGTAT................................................................................2612.00158.002.00----------------------------------------------------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAA.....................................................................................2112.005.00----------------------1.00--------------------------------1.00---------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCATT....................................................................................2212.005.00---------------------------------------------------2.00-------------------------------------------
...............................................................................................................................................................................................................TACAGTGAGGACTCCAGCCAGGGAGAACAG.............3012.002.00--------------------1.00----------1.00---------------------------------------------------------------
....................................................................................................................................................................................TTGTTCCTGTGTCTCCACAGTT................................................222.000.00------------------------------------------------2.00----------------------------------------------
................................................................................................................................................................................................................ACAGTGAGGACTCCAGCCAGGGA...................2312.002.00---------------2.00-------------------------------------------------------------------------------
..............................................................................................................................................ACTTGGAGGATTGCTGGAACCAGAGT..................................................................................2612.002.00---------------------------------1.00-------------------------------------------------1.00-----------
................................................................................................................................................TTGGAGGATTGCTGGAACCATAGT..................................................................................2412.005.002.00----------------------------------------------------------------------------------------------
..............................................................................................................................................ACTTGGAGGATTGCTGGAACCAGAGA..................................................................................2612.001.00-------------------------2.00---------------------------------------------------------------------
.........................................................................................................................................................................................................TACCCGTACAGTGAGGACTCCAGCC........................2512.002.00--------------------1.00----------1.00---------------------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAGAGTTA................................................................................2612.00158.002.00----------------------------------------------------------------------------------------------
..............................................................................................................................................ACTTGGAGGATTGCTGGAACCAGT....................................................................................242.000.00-1.00---------------------------------------------------------------1.00-----------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAGAGTAAC...............................................................................2712.00158.002.00----------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................CAGTGAGGACTCCAGCCAGGGAGA.................2411.001.00----------------------------------1.00------------------------------------------------------------
..........................................................................................................................................................................................................ACCCGTACAGTGAGGACTCCAGC.........................2311.001.00--------------------------------------------------1.00--------------------------------------------
...............................................................................................................................................................................................................TACAGTGAGGACTCCAGCCAGGGAAA.................2611.001.00----------------------1.00------------------------------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAGAGAA.................................................................................2511.00102.00----------------------------------------1.00------------------------------------------------------
...............................................................................................................................................................................................................TACAGTGAGGACTCCAGCCAGGGA...................2411.001.00----------------------1.00------------------------------------------------------------------------
...............................................................................................................................................................................................................TACAGTGAGGACTCCAGCCAGGGCGCT................271.000.00------------------------------------------------------------1.00----------------------------------
.........................................................................................................................................................................................................TACCCGTACAGTGAGGACTCCAGCCAGGGAA..................311.000.00----------------------------------------------------------------------------------1.00------------
...............................................................................................................................................................................................................TACAGTGAGGACTCCAGCC........................1911.001.00----------------------------------1.00------------------------------------------------------------
...............................................................................................................................................CTTGGAGGATTGCTGGAACCAG.....................................................................................2211.001.00-----------1.00-----------------------------------------------------------------------------------
................................................TGGGGACACTTGGGTGC.........................................................................................................................................................................................171.000.00---------------------------------------------------------1.00-------------------------------------
..............................................................................................................................................ACTTGGAGGATTGCTGGAACCAGAGC..................................................................................2611.001.00--------1.00--------------------------------------------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAGAT...................................................................................2311.00118.00--------------------------------------------------------------------------------------------1.00--
.............................................................................................................................................................................................................CGTACAGTGAGGACTCCAGCC........................2111.001.00-------------1.00---------------------------------------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAGAGTA.................................................................................2511.00158.00--------------------------1.00--------------------------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAGAGC..................................................................................2411.00102.00------1.00----------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................TCCAGCCAGGGAGAACAGTACATTAAC....271.000.00---------------------------------------------1.00-------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAGAC...................................................................................2311.00118.001.00----------------------------------------------------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAGAGTAAAA..............................................................................2811.00158.001.00----------------------------------------------------------------------------------------------
.........................................................................................................................................TCAGAACTTGGAGGATT................................................................................................1711.001.00----------------------------------------------1.00------------------------------------------------
..............................................................................................................................................ACTTGGAGGATTGCTGGAACCAGAG...................................................................................2511.001.00-1.00---------------------------------------------------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAGAGTTTA...............................................................................2711.00158.00-1.00---------------------------------------------------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACC.......................................................................................1911.001.00------1.00----------------------------------------------------------------------------------------
...............................................................................................................................................................................................................TACAGTGAGGACTCCAGCCAGGGAGAACAGT............3111.001.00------------------------------------1.00----------------------------------------------------------
........................................................................................................................................................................................................CTACCCGTACAGTGAGGACTCCAGCCAGGG....................3011.001.00-------------1.00---------------------------------------------------------------------------------
..............................................................................................................................................................................................................GTACAGTGAGGACTCCAGCCAGGGAGT.................271.000.00-------------------------------1.00---------------------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAAAA...................................................................................2311.005.00-----------------------1.00-----------------------------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCTGT....................................................................................2211.001.00----1.00------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................GGACTCCAGCCAGGGAGA.................1811.001.00--------------------1.00--------------------------------------------------------------------------
..................................................................................................................................................................................CTTTGTTCCTGTGTCGGT......................................................181.000.00-----------------------------------------------------------1.00-----------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCTAGT...................................................................................2311.001.001.00----------------------------------------------------------------------------------------------
..........................................................................................................................................................GCTGGAACCAGAGTCGGAG.............................................................................191.000.00-------------------------------------------------------------------1.00---------------------------
.......................................................................................................................................................................................................GCTACCCGTACAGTGAGGACTCCAGCCAGGGAGAACAGTACATGAACACGA5111.001.00----------------------------------------------------------------------------------------1.00------
................................................................................................................................................TTGGAGGATTGCTGGAACCAGAGTAGA...............................................................................2711.00158.001.00----------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................CAGCTACCCGTACAGTGAGGACTCCAGCCAT......................311.000.00-----------------------------------------------------1.00-----------------------------------------
..............................................................................................................................................ACTTGGAGGATTGCTGGAACC.......................................................................................2111.001.001.00----------------------------------------------------------------------------------------------
..............................................................................................................................................ACTTGGAGGATTGCTGGAAC........................................................................................2011.001.00-----1.00-----------------------------------------------------------------------------------------
..................................................................................................................................................................................................................AGTGAGGACTCCAGCCAGGGAGAACAGTA...........2911.001.00----------1.00------------------------------------------------------------------------------------
.............................................................................................................................................................................................................CGTACAGTGAGGACTCCAGCCAGG.....................2411.001.00-------------1.00---------------------------------------------------------------------------------
..............................................................................................................................................ACTTGGAGGATTGCTGGAACCA......................................................................................2211.001.00-----------1.00-----------------------------------------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCATAGA..................................................................................2411.005.001.00----------------------------------------------------------------------------------------------
...................................................................................................................................................................................TTTGTTCCTGTGTCTCCACACA.................................................2211.001.00-------------------------------------1.00---------------------------------------------------------
...............................................................................................................................................CTTGGAGGATTGCTGGAACCAGAGA..................................................................................251.000.00---------------------------1.00-------------------------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAGAGTAAA...............................................................................2711.00158.001.00----------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................TACCCGTACAGTGAGGACTCCAGT.........................241.000.00------------1.00----------------------------------------------------------------------------------
.....................................................................................................................................................................................................................GAGGACTCCAGCCAGGGAGAACA..............2311.001.00-----------------------------1.00-----------------------------------------------------------------
.........................................................................................................................................................................................................TACCCGTACAGTGAGGACTCC............................2111.001.00--------------------------------------------------1.00--------------------------------------------
.................................................................................................................................................TGGAGGATTGCTGGAACCAGAGT..................................................................................2311.001.001.00----------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................TGAGGACTCCAGCCAGGGAGAACAGTAC..........2811.001.00----------------------------------------------------------------1.00------------------------------
..........................................................................................................................................................................................................ACCCGTACAGTGAGGACTCCAGCCAGGGA...................2911.001.00----------------------------1.00------------------------------------------------------------------
...................................................................................................................................................................................................................................GGGAGAACAGTACATGAAC....1911.001.00-------------1.00---------------------------------------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAGCG...................................................................................2311.0010.00--------------------------------1.00--------------------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAAGT...................................................................................2311.005.001.00----------------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGCTACCCGTACAGTGAGGACTCCAGC.........................2711.001.00--------------------1.00--------------------------------------------------------------------------
...................................................................................................................................................................................TTTGTTCCTGTGTCTCCACA...................................................2011.001.00-------------------------------------------------------------------------------------1.00---------
...............................................................................................................................................................................................................TACAGTGAGGACTCCAGCCAGGGAGAACAGTA...........3211.001.00--------------------------------------------------------1.00--------------------------------------
.................................................................................................................................................................................................................CAGTGAGGACTCCAGCCAGGGAG..................2311.001.00------1.00----------------------------------------------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAGAGG..................................................................................2411.00102.00---------1.00-------------------------------------------------------------------------------------
......................................................................................................................................................................................................................AGGACTCCAGCCAGGGAGAACAGTT...........251.000.00-------------------1.00---------------------------------------------------------------------------
....................................................................................................................................................................................................................................GGAGAACAGTACATGAAC....1811.001.00---------------------------------------1.00-------------------------------------------------------
.........................................................................................................................................................................................................TACCCGTACAGTGAGGACTCCAGCCAGGGAG..................3111.001.00----------------------------------------------------------------------------1.00------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAGAGAT.................................................................................2511.00102.001.00----------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................TACAGTGAGGACTCCAGCCAGGGAGAACA..............2911.001.00-------------1.00---------------------------------------------------------------------------------
............................................................................................................................................................................................................CCGTACAGTGAGGACTCC............................1811.001.00---------------------------1.00-------------------------------------------------------------------
...............................................................................................................................................CTTGGAGGATTGCTGGAACCAGT....................................................................................2311.001.00-----1.00-----------------------------------------------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAGTAA..................................................................................2411.0010.00-------------------------------------------------------------------------1.00---------------------
..................................................................................................................................................................................................................................AGGGAGAACAGTACATGAACACGAGT2611.001.00------------------------------------1.00----------------------------------------------------------
...............................................................................................................................................................................................................TACAGTGAGGACTCCAGCCAGGGAA..................2511.001.00-------------------1.00---------------------------------------------------------------------------
..................................................................................................................................................................................................................................AGGGAGAACAGTACATGAACACGA2411.001.00---------------------------------------------------------------------------------1.00-------------
..........................................................................................................................................................................................................................CTCCAGCCAGGGAGAACAGTACATGAACA...2911.001.00----------1.00------------------------------------------------------------------------------------
..............................................................................................................................................ACTTGGAGGATTGCTGGAAG........................................................................................201.000.00--------------------------------------------------------------------------1.00--------------------
................................................................................................................................................TTGGAGGATTGCTGGAACCAGAGTTT................................................................................2611.00158.001.00----------------------------------------------------------------------------------------------
...................................................................................................................................................GAGGATTGCTGGAACCA......................................................................................1730.330.330.33----------------------------------------------------------------------------------------------
................................................................................................................................................TTGGAGGATTGCTGGA..........................................................................................1660.170.17------------0.17----------------------------------------------------------------------------------
....................................................................................................................................................AGGATTGCTGGAACC.......................................................................................1580.120.12---------------------------------------------------------0.12-------------------------------------

Antisense strand
AGCCTGACGCATGCAATAATAGGTACATGCAGGGAGAATTAATTTTGATGGGGACACTTGGGTTTCAAGTTTGGCTTTCTATATTCTAGAAACCTCTCTGTGTGCACTCTTTCCTGGATAGCAGCACACCCTTCCCTTCAGAACTTGGAGGATTGCTGGAACCAGAGTCTAGCTAACACTTTGTTCCTGTGTCTCCACAGCTACCCGTACAGTGAGGACTCCAGCCAGGGAGAACAGTACATGAACACGA
.................................................................................................................................................((((((...((.((((.((((((.........)))))))))).)).)))))).....................................................
...........................................................................................................................................140.........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		mjLiverWT1()
Liver Data. (liver)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjTestesWT3()
Testes Data. (testes)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		mjLiverWT3()
Liver Data. (liver)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		mjTestesWT4()
Testes Data. (testes)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		GSM475280(GSM475280)
Mili-IP. (mili testes)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR553586(SRX182792)
source: Testis. (testes)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR553603(SRX182809)
source: Spermatids. (Spermatids)		SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR206940(GSM723281)
other. (brain)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjTestesWT2()
Testes Data. (testes)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR363958(GSM822760)
Adult-WTSmall RNA Miwi IP. (testes)		GSM475281(GSM475281)
total RNA. (testes)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR014234(GSM319958)
Ovary total. (ovary)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR037909(GSM510446)
newborn_rep2. (total RNA)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		GSM475279(GSM475279)
Miwi-IP. (miwi testes)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR206939(GSM723280)
other. (brain)		SRR038741(GSM527276)
small RNA-Seq. (brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes)		SRR095855BC8(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR037906(GSM510442)
brain_rep3. (brain)		SRR206941(GSM723282)
other. (brain)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
.....................................................................................................................ATAGCAGCACACCCTTCCCTTCAGA............................................................................................................ 2511.001.00---1.00-------------------------------------------------------------------------------------------
........................................................................................................................GCAGCACACCCTTCCCTTCAGA............................................................................................................ 2211.001.00---1.00-------------------------------------------------------------------------------------------
...............................................................................................CTCTGTGTGCACTCTTTG......................................................................................................................................... 181.000.00----------------------------------1.00------------------------------------------------------------