ID: uc009iha.10
GENE: Sytl2(10)
chr7:97544784-97545033+


(1)
AGO1.ip 		(5)
AGO2.ip 		(1)
AGO3.ip 		(16)
BRAIN 		(1)
CELL-LINE 		(1)
DCR.mut 		(1)
DGCR8.mut 		(5)
EMBRYO 		(2)
FIBROBLAST 		(2)
LIVER 		(2)
LYMPH 		(5)
OTHER 		(1)
OTHER.mut 		(3)
SKIN 		(5)
SPLEEN 		(6)
TESTES 		(1)
THYMUS

Sense strand
TCTGTCACTTAGCAACAGTTAAAGCCCAGGCATCTGTATCATGTCAGATCACCTGTGTTGGTATTGCCTTCTGCCATATCAAATTAGCTGGTTTTACATGCAAGCTGGAAGCATAATGCCAAGCAGAGACTGTGTGCGAGCCACTTGCACTGGGGTGTCAGGAATGCGACATAAACACTGCCTATTTCTGATGCACCCAGGCGAGTGGCAGTGTGATGAGCGTTTACAGTGGAGACTTTGGCAACCTAGA
..............................................................................................................................................((((((.(((((((((((((((((((..........)))..))))))))))).)))))))))))............................................
..............................................................................................................................................143............................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR206941(GSM723282)
other. (brain)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR206940(GSM723281)
other. (brain)		SRR306526(GSM750569)
19-24nt. (ago2 brain)		SRR073954(GSM629280)
total RNA. (blood)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR037900(GSM510436)
testes_rep1. (testes)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		GSM475281(GSM475281)
total RNA. (testes)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
...................................................................................................................................................CACTGGGGTGTCAGGAATGCGAC................................................................................2319.009.00--1.002.001.00---2.00-1.00--------1.00-------1.00--------------------
...................................................................................................................................................CACTGGGGTGTCAGGAATGCG..................................................................................2118.008.00-1.00-1.002.00----2.00---1.00---1.00------------------------------
...................................................................................................................................................CACTGGGGTGTCAGGAATGCGA.................................................................................2216.006.00------1.001.00------1.00------1.00--1.00------------------1.00----
...................................................................................................................................................CACTGGGGTGTCAGGAATGCGACA...............................................................................2415.005.001.00-----------1.00-------1.00----1.00---1.00------------------
....................................................................................................................................................ACTGGGGTGTCAGGAATGCGA.................................................................................2115.005.001.00-----2.00----------------------------1.001.00-----------
......................................................................................................................................................TGGGGTGTCAGGAATGCGACA...............................................................................2113.003.001.00---------------------------1.00----------------1.00--
....................................................................................................................................................................................CCTATTTCTGATGCACCCAGTT................................................223.000.002.00------1.00----------------------------------------
....................................................................................................................................................................................CCTATTTCTGATGCACCCAGACT...............................................232.000.00-----2.00------------------------------------------
....................................................................................................................................................................................CCTATTTCTGATGCACCCAGAT................................................222.000.00-2.00----------------------------------------------
....................................................................................................................................................................................CCTATTTCTGATGCACCCAGA.................................................212.000.00--1.00----------------------------------1.00----------
....................................................................................................................................................................................CCTATTTCTGATGCACCCAGTCT...............................................232.000.00-1.00------1.00---------------------------------------
....................................................................................................................................................................................CCTATTTCTGATGCACCCAGT.................................................212.000.00-----1.00----1.00-------------------------------------
...................................................................................................................................................CACTGGGGTGTCAGGAATGC...................................................................................2012.002.001.00------------1.00----------------------------------
.....................................................................................................................................................CTGGGGTGTCAGGAATGCGAC................................................................................2112.002.00--1.00--------------------------------------1.00------
....................................................................................................................................................................................CCTATTTCTGATGCACCCAGGA................................................2211.001.00----------------1.00-------------------------------
........................................................................................................................................................................................................................TGAGCGTTTACAGTGGAGACTTT...........2311.001.00-----------1.00------------------------------------
....................................................................................................................................................ACTGGGGTGTCAGGAATGCGAC................................................................................2211.001.00------------------------------1.00-----------------
...........................................................................................................................................................................................................AGTGGCAGTGTGATGAGCGTT..........................2111.001.00--1.00---------------------------------------------
...................................................................................................................................................CACTGGGGTGTCAGGAATGCGACT...............................................................................2411.009.001.00-----------------------------------------------
..................TTAAAGCCCAGGCATCTAA.....................................................................................................................................................................................................................191.000.00--------------------------------------------1.00---
...................TAAAGCCCAGGCATCTAATT...................................................................................................................................................................................................................201.000.00----------------------------------------------1.00-
....................................................................................................................................................................................CCTATTTCTGATGCACCC....................................................1811.001.00-------------------------------1.00----------------
....................................................................................................................................................................................CCTATTTCTGATGCACCCAGACC...............................................231.000.00---1.00--------------------------------------------
......................................................................................................................................................TGGGGTGTCAGGAATGCGACAT..............................................................................2211.001.001.00-----------------------------------------------
.......................................................................................................................................................GGGGTGTCAGGAATGCGA.................................................................................1811.001.00---------------------------------1.00--------------
.................................................................................................................................................TGCACTGGGGTGTCAGGAATGCGACATA.............................................................................2811.001.00-----------------------1.00------------------------
...................................................................................................................................................CACTGGGGTGTCAGGAATGCGT.................................................................................2211.008.001.00-----------------------------------------------
....................................................................................................................................................ACTGGGGTGTCAGGAATGCGACA...............................................................................2311.001.00--------------------------------------1.00---------
....................................................................................................................................................................................CCTATTTCTGATGCACCCAGTCA...............................................231.000.001.00-----------------------------------------------
....................................................................................................................................................................................CCTATTTCTGATGCACCCATTT................................................221.000.00-----------1.00------------------------------------
.....................................................................................................................................................CTGGGGTGTCAGGAATGCGA.................................................................................2011.001.001.00-----------------------------------------------
...........................................................................................................................CAGAGACTGTGTGCGCCC.............................................................................................................181.000.00----------------------------------------1.00-------
....................................................................................................................................................................................CCTATTTCTGATGCACCCAGG.................................................2111.001.00------------1.00-----------------------------------
............................................................................................................................AGAGACTGTGTGCGAGCCACTTGCACTGGGGTGTCAGGAATGCGACATAAACACTGCCTATTTCTGATGCACCCAG..................................................7611.001.00------------------------------------------1.00-----
....................................................................................................................................................................................................................GTGATGAGCGTTTACAGTGGAGACTTTG..........2811.001.00--------------------------------1.00---------------
..................................................................................................................................................................................................................GTGTGATGAGCGTTTACAGTGGAGACTTT...........2911.001.00---------1.00--------------------------------------
.................................................................................................................................................TGCACTGGGGTGTCAGGAATGC...................................................................................2211.001.00---------------1.00--------------------------------
....................................................................................................................................................................................CCTATTTCTGATGCACCCAGAAA...............................................231.000.00---------------------------------------1.00--------
....................................................................................................................................................ACTGGGGTGTCAGGAATGCG..................................................................................2011.001.001.00-----------------------------------------------
...........................AGGCATCTGTATCATGCTAA...........................................................................................................................................................................................................201.000.00----------------------1.00-------------------------
...................................................................................................................................................CACTGGGGTGTCAGGAATGCTA.................................................................................2211.002.00-1.00----------------------------------------------
....................................................................................................................................................................................CCTATTTCTGATGCACCCAGTC................................................221.000.00-------1.00----------------------------------------
.........................CCAGGCATCTGTATC..................................................................................................................................................................................................................1560.170.17-----------------------------------------------0.17

Antisense strand
TCTGTCACTTAGCAACAGTTAAAGCCCAGGCATCTGTATCATGTCAGATCACCTGTGTTGGTATTGCCTTCTGCCATATCAAATTAGCTGGTTTTACATGCAAGCTGGAAGCATAATGCCAAGCAGAGACTGTGTGCGAGCCACTTGCACTGGGGTGTCAGGAATGCGACATAAACACTGCCTATTTCTGATGCACCCAGGCGAGTGGCAGTGTGATGAGCGTTTACAGTGGAGACTTTGGCAACCTAGA
..............................................................................................................................................((((((.(((((((((((((((((((..........)))..))))))))))).)))))))))))............................................
..............................................................................................................................................143............................................................206..........................................
SizePerfect hitTotal NormPerfect NormSRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR206941(GSM723282)
other. (brain)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR206940(GSM723281)
other. (brain)		SRR306526(GSM750569)
19-24nt. (ago2 brain)		SRR073954(GSM629280)
total RNA. (blood)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR306527(GSM750570)
19-24nt. (ago2 brain)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR037900(GSM510436)
testes_rep1. (testes)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		GSM475281(GSM475281)
total RNA. (testes)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
...........................................................................................................................................................................................CTGATGCACCCAGGCTGCA............................................ 191.000.00----------------------------------1.00-------------
..........................................................................................................................................................................ATAAACACTGCCTATAGA.............................................................. 181.000.00------------------1.00-----------------------------
...................................................................................................................................................................................GCCTATTTCTGATGCACCCAGGCGAGTGG.......................................... 2911.001.00--------------------------1.00---------------------