ID: uc009fyt.0
GENE: Med29
chr7:29171994-29172243-


(3)
AGO1.ip
(13)
AGO2.ip
(1)
AGO3.ip
(3)
B-CELL
(35)
BRAIN
(2)
CELL-LINE
(1)
DCR.mut
(1)
DGCR8.mut
(7)
EMBRYO
(7)
ESC
(1)
FIBROBLAST
(1)
KIDNEY
(5)
LIVER
(1)
LUNG
(1)
LYMPH
(11)
OTHER
(7)
OTHER.mut
(1)
OVARY
(4)
PIWI.ip
(3)
SKIN
(4)
SPLEEN
(21)
TESTES
(1)
THYMUS
(1)
UTERUS

Sense strand
AGAAATCCCAAGTGCTGGGATTATAGGTGTGCACCATCACTGCCCGGCAGCAAAGACATTTAATAGCCTAATCCCAGAGAGAAGTAGGCACGTGTGCTGGGTGACCCAGTCTGACTTTGGCTGCCCATCAGTTTAGCTCCAGGTTGGGGGGAGAGGAGGCTGCATCCAGGAAAGTGATGCTGTTGTTCTCTTTTCCACAGCGCCTGGCCCACGAGTGCCTTTCACAGAGCTGTGACAGCGCCAAACACTC
................................................................................................................................................((((..((((((((((.(((((.........))))).))).)))))))..)).))...................................................
..........................................................................................................................................139..........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR553582(SRX182788)
source: Brain. (Brain)
mjLiverWT2()
Liver Data. (liver)
mjLiverWT1()
Liver Data. (liver)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
mjTestesWT4()
Testes Data. (testes)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR037906(GSM510442)
brain_rep3. (brain)
SRR206941(GSM723282)
other. (brain)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR553585(SRX182791)
source: Kidney. (Kidney)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR037925(GSM510463)
e9p5_rep3. (embryo)
SRR206939(GSM723280)
other. (brain)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR014234(GSM319958)
Ovary total. (ovary)
mjTestesWT3()
Testes Data. (testes)
SRR206942(GSM723283)
other. (brain)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)
SRR306527(GSM750570)
19-24nt. (ago2 brain)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR306528(GSM750571)
19-24nt. (ago2 brain)
SRR073954(GSM629280)
total RNA. (blood)
SRR206940(GSM723281)
other. (brain)
SRR060845(GSM561991)
total RNA. (brain)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
GSM475281(GSM475281)
total RNA. (testes)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR037907(GSM510443)
brain_rep4. (brain)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR038744(GSM527279)
small RNA-Seq. (brain)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR037926(GSM510464)
e9p5_rep4. (embryo)
SRR306531(GSM750574)
19-24nt. (ago2 brain)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR306539(GSM750582)
19-24nt. (ago2 brain)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR346415(SRX098256)
source: Testis. (Testes)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
mjTestesWT2()
Testes Data. (testes)
SRR306538(GSM750581)
19-24nt. (ago2 brain)
SRR525240(SRA056111/SRX170316)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)
.................................................................................................................................................................................TGCTGTTGTTCTCTTTTCCACA...................................................22133.0033.005.003.00-7.002.00-1.00-2.00-3.00-----1.00-1.00-----1.00-----1.001.00-1.00---1.00--2.00---------------------------------------------1.00------------------
.................................................................................................................................................................................TGCTGTTGTTCTCTTTTCCACAG..................................................23131.0031.001.004.007.00-2.00----2.00------1.00------2.001.00---1.00--------1.002.001.00---1.00--1.00-----1.00--1.00-1.00---------------------------------1.00-------------
.................................................................................................................................................................................TGCTGTTGTTCTCTTTTCCA.....................................................20116.0016.00-----5.00--1.00----2.00---2.00---------1.00----2.00-1.00------1.00--------------1.00------------------------------------------------
.................................................................................................................................................................................TGCTGTTGTTCTCTTTTCCACAGA.................................................24112.0031.00------3.002.00-2.00-----------2.00---------1.00--------------------------1.00--------------------------------------1.00-------
.................................................................................................................................................................................TGCTGTTGTTCTCTTTTCCACAGT.................................................24111.0031.00-1.00--1.00-------------------1.00--1.001.00------------------------1.00--------1.00---1.00----------1.001.00-----------------1.00--------
.................................................................................................................................................................................TGCTGTTGTTCTCTTTTCCAC....................................................21111.0011.00----1.00---1.00----1.00---------1.00-3.00------------------------1.00---------1.00-------------------1.00---1.00--------------------
.................................................................................................................................................................................TGCTGTTGTTCTCTTTTCC......................................................1928.008.000.50----1.00--1.00-----1.50--0.500.50-----------------------0.500.50--0.50----------------------------------------------------0.50-0.50-0.50-
...............................................................................................................................................TTGGGGGGAGAGGAGGCTGCATC....................................................................................2315.005.00-------------------1.002.00---------------1.00--------------1.00-----------------------------------------------------
...............................................................................................................................................TTGGGGGGAGAGGAGGCTGCAT.....................................................................................2215.005.002.00------------1.00---1.00-1.00-------------------------------------------------------------------------------------
.................................................................................................................................................................................TGCTGTTGTTCTCTTTTCCACT...................................................2215.0011.00-------1.00----------1.00-----------1.00---1.00------------------------------------------------------------1.00---------
.................................................................................................................................................................................TGCTGTTGTTCTCTTTTCCATT...................................................2214.0016.00-----------------------------------------------------------1.00-------------------1.00--------1.001.00---------------
...............TGGGATTATAGGTGTGCACCATCACTGC...............................................................................................................................................................................................................2813.003.00----------------------3.00----------------------------------------------------------------------------------
................................................................................................................................................TGGGGGGAGAGGAGGCTGCAT.....................................................................................2113.003.00-------------------------------------------------1.00---------------1.00----------------1.00----------------------
.................................................................................................................................................................................TGCTGTTGTTCTCTTTTCCACAA..................................................2313.0033.001.00-1.00------1.00-----------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................ACGAGTGCCTTTCACAGAGCT...................2122.502.50------2.000.50-------------------------------------------------------------------------------------------------
....................................TCACTGCCCGGCAGCGCA....................................................................................................................................................................................................182.000.00-----------------------------2.00---------------------------------------------------------------------------
.................................................................................................................................................................................TGCTGTTGTTCTCTTTTCCAAT...................................................2212.0016.00-------1.00----------------------------------------1.00--------------------------------------------------------
..................................................................................................................................................GGGGGAGAGGAGGCTGCAT.....................................................................................1912.002.00-----------------------------------1.00-----------1.00---------------------------------------------------------
.................................................................................................................................................................................TGCTGTTGTTCTCTTTTCCACAGAA................................................2512.0031.00-------1.00---------------------------1.00---------------------------------------------------------------------
................................................................................................................................................TGGGGGGAGAGGAGGCTGCATCT...................................................................................2311.001.00-----------------------------------------------------------------------1.00---------------------------------
...............TGGGATTATAGGTGTGCACAACT....................................................................................................................................................................................................................231.000.00---------------------------------------------------------------------------------1.00-----------------------
.................................................................................................................................................................................TGCTGTTGTTCTCTTTTCCACAAT.................................................2411.0033.00------------------------------------------------------1.00--------------------------------------------------
............................GTGCACCATCACTGCCCGGCAGCAAAGAC.................................................................................................................................................................................................2911.001.00--------------------1.00------------------------------------------------------------------------------------
.................................................................................................................................................GGGGGGAGAGGAGGCAT........................................................................................171.000.00--------------1.00------------------------------------------------------------------------------------------
.................................................................................................................................................GGGGGGAGAGGAGGCTGCATAAT..................................................................................231.000.00------------------------------------------------------------------------1.00--------------------------------
...................................................................................................................................................GGGGAGAGGAGGCTGCGGGG...................................................................................201.000.00--------------1.00------------------------------------------------------------------------------------------
...............................................................................................................................TCAGTTTAGCTCCAGGTTGGGGGGT..................................................................................................251.000.00--------------------------1.00------------------------------------------------------------------------------
................................................................................................................................................TGGGGGGAGAGGAGGCTGCA......................................................................................2011.001.00----------------------------------------------------------------------------------------------1.00----------
..................................................................................................................................................................................GCTGTTGTTCTCTTTTCCACAG..................................................2211.001.00---------------------------------------------------------------------------------------------1.00-----------
.................................................................................................................................................................................................TCCACAGCGCCTGGCCCACGAGTGCCTT.............................2811.001.00--------------------------------------------1.00------------------------------------------------------------
................................................................................................................................................TGGGGGGAGAGGAGGCTGCATC....................................................................................2211.001.00-------------------------------------------------------------------------1.00-------------------------------
.....................................................................................................................................................................................GTTGTTCTCTTTTCCACAGT.................................................201.000.00---------------------------------------1.00-----------------------------------------------------------------
...............................................................................................................................................................................GATGCTGTTGTTCTCTTTTCAATT...................................................241.000.00-----------------------------------------------------------------------------------1.00---------------------
...............TGGGATTATAGGTGTGCAACGA.....................................................................................................................................................................................................................221.000.00------------1.00--------------------------------------------------------------------------------------------
.................................................................................................................................................................................TGCTGTTGTTCTCTTTTCCACGGA.................................................2411.0011.00---------------------1.00-----------------------------------------------------------------------------------
...............................................................................................................................................TTGGGGGGAGAGGAGGCTGCATCT...................................................................................2411.005.00-------------------------------------------------------------------------------------1.00-------------------
...............................................................................................................................................TTGGGGGGAGAGGAGGCTGCAAAGT..................................................................................251.000.00-------------------------------------------------------------1.00-------------------------------------------
.............................TGCACCATCACTGCCCGGCGGCA......................................................................................................................................................................................................231.000.00----------------1.00----------------------------------------------------------------------------------------
.................................................................................................................................................................................TGCTGTTGTTCTCTTTTCCACAGTA................................................2511.0031.00----1.00----------------------------------------------------------------------------------------------------
...............................................................................................................................................TTGGGGGGAGAGGAGGCTGCAA.....................................................................................221.000.00--------------------------------------------------------------------1.00------------------------------------
.................................................................................................................................................................................TGCTGTTGTTCTCTTTTCCACAGAAG...............................................2611.0031.00---------------------------------------------------------------------------------------1.00-----------------
...............................................................................................................................................TTGGGGGGAGAGGAGGCTGCATCTTT.................................................................................2611.005.00------------------------------------1.00--------------------------------------------------------------------
............................................................................................................................................................................................................................TTCACAGAGCTGTGACAGCGCCA.......2321.001.00----------1.00----------------------------------------------------------------------------------------------
.................................................................................................................................................GGGGGGAGAGGAGGCTGAAA.....................................................................................201.000.00-------------------1.00-------------------------------------------------------------------------------------
......................................................................................................................................................................................................................GTGCCTTTCACAGAGCTGTGACAGCAT.........271.000.00--------------------------------------------------------------------------------------------1.00------------
............................................................................................................................................................................................................TGGCCCACGAGTGCCTTTCACAGAGCT...................2720.500.50----------------------------------------------------------------------------------------------------0.50----
..........................................................................................................................................................................................................................CTTTCACAGAGCTGTGACAGCGC.........2320.500.50----------0.50----------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................TTTCACAGAGCTGTGACAGCGCCAAACAC..2920.500.50------------------------------------------------------------------------------------------------------0.50--
.................................................................................................................................................................................TGCTGTTGTTCTCTTTTCCCCA...................................................2220.508.00------------------0.50--------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................TGCCTTTCACAGAGCTGTGACAGCGCC........2720.500.50--------------------------------------------0.50------------------------------------------------------------
..................................................................................................................................................................................GCTGTTGTTCTCTTTTCC......................................................1820.500.50---------------------------0.50-----------------------------------------------------------------------------
.......................................................................................................................................................................................................GCGCCTGGCCCACGAG...................................1620.500.50--------------0.50------------------------------------------------------------------------------------------
.......................................................................................................................................................................AGGAAAGTGATGCTGT...................................................................1670.140.14--------------------------------------------------------------------------------------------------------0.14

Antisense strand
AGAAATCCCAAGTGCTGGGATTATAGGTGTGCACCATCACTGCCCGGCAGCAAAGACATTTAATAGCCTAATCCCAGAGAGAAGTAGGCACGTGTGCTGGGTGACCCAGTCTGACTTTGGCTGCCCATCAGTTTAGCTCCAGGTTGGGGGGAGAGGAGGCTGCATCCAGGAAAGTGATGCTGTTGTTCTCTTTTCCACAGCGCCTGGCCCACGAGTGCCTTTCACAGAGCTGTGACAGCGCCAAACACTC
................................................................................................................................................((((..((((((((((.(((((.........))))).))).)))))))..)).))...................................................
..........................................................................................................................................139..........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR553582(SRX182788)
source: Brain. (Brain)
mjLiverWT2()
Liver Data. (liver)
mjLiverWT1()
Liver Data. (liver)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
mjTestesWT4()
Testes Data. (testes)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR037906(GSM510442)
brain_rep3. (brain)
SRR206941(GSM723282)
other. (brain)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR553585(SRX182791)
source: Kidney. (Kidney)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR037925(GSM510463)
e9p5_rep3. (embryo)
SRR206939(GSM723280)
other. (brain)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR014234(GSM319958)
Ovary total. (ovary)
mjTestesWT3()
Testes Data. (testes)
SRR206942(GSM723283)
other. (brain)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)
SRR306527(GSM750570)
19-24nt. (ago2 brain)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR306528(GSM750571)
19-24nt. (ago2 brain)
SRR073954(GSM629280)
total RNA. (blood)
SRR206940(GSM723281)
other. (brain)
SRR060845(GSM561991)
total RNA. (brain)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
GSM475281(GSM475281)
total RNA. (testes)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR037907(GSM510443)
brain_rep4. (brain)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR038744(GSM527279)
small RNA-Seq. (brain)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR037926(GSM510464)
e9p5_rep4. (embryo)
SRR306531(GSM750574)
19-24nt. (ago2 brain)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
SRR306539(GSM750582)
19-24nt. (ago2 brain)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR346415(SRX098256)
source: Testis. (Testes)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
mjTestesWT2()
Testes Data. (testes)
SRR306538(GSM750581)
19-24nt. (ago2 brain)
SRR525240(SRA056111/SRX170316)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)
.......................................................................................................................................................................................TGTTCTCTTTTCCACAGCGCCTGGCC......................................... 2613.003.00---------------3.00-----------------------------------------------------------------------------------------
...............................................................................................................................................................................GATGCTGTTGTTCTCTTTTCCACA................................................... 2412.002.00------------2.00--------------------------------------------------------------------------------------------
............................................................................................................................................................................AGTGATGCTGTTGTTCTCTTTTCCACA................................................... 2712.002.00-----------2.00---------------------------------------------------------------------------------------------
.......................................................................................................ACCCAGTCTGACTTTGGCTGCCCATCA........................................................................................................................ 2712.002.00-----------1.001.00--------------------------------------------------------------------------------------------
.........................................................................................................................................................................GAAAGTGATGCTGTTGTTCTCTTTTCCA..................................................... 2812.002.00-----------------------------------------1.00------------------------------------------------1.00--------------
..........................................................................................................................................................................................TCTCTTTTCCACAGCGCCTGGCCCA....................................... 2512.002.00---------------------------------------------1.00------------------1.00----------------------------------------
......................................................................................................................................................GAGAGGAGGCTGCATCCTT................................................................................. 191.000.00----------------1.00----------------------------------------------------------------------------------------
.........................................................................................................................................................................................................GCCTGGCCCACGAGTGCCTTTCACA........................ 2521.001.00-----------0.50---------------------------------0.50-----------------------------------------------------------
...............................................CAGCAAAGACATTTAATAGCCTAATCCCA.............................................................................................................................................................................. 2911.001.00--------------------------1.00------------------------------------------------------------------------------
......................................................................................................................................................................................................AGCGCCTGGCCCACGAGTGCCT.............................. 2211.001.00--------------------------------------------------------------------------1.00------------------------------
..................................................................................................................................GTTTAGCTCCAGGTTCATT..................................................................................................... 191.000.00--------------------------------------------------------------------------------------------------1.00------
...........................................................................................................AGTCTGACTTTGGCTGCCCATCAGTTTA................................................................................................................... 2811.001.00---------------------------------------------------------------------1.00-----------------------------------
.................................................................................................................................................................................TGCTGTTGTTCTCTTTTCCAC.................................................... 2111.001.00---------------------------------------------------------------1.00-----------------------------------------
..................................................................................................................................................................................GCTGTTGTTCTCTTTTCCACAGCGCCT............................................. 2711.001.00-----------1.00---------------------------------------------------------------------------------------------
................................................................................................................................................................................................TTCCACAGCGCCTGGGAA........................................ 181.000.00------------------------------------------1.00--------------------------------------------------------------
......CCCAAGTGCTGGGATTATAGCGG............................................................................................................................................................................................................................. 231.000.00-------------------------------------------------------------------1.00-------------------------------------
..............................................................................................................................................................................................TTTTCCACAGCGCCTGGCCCACGAAA.................................. 261.000.00---------------1.00-----------------------------------------------------------------------------------------
......................................................................................................................................................................................................AGCGCCTGGCCCACGAGT.................................. 1811.001.00---------------------------------------------------------------------------1.00-----------------------------
..................................CATCACTGCCCGGCAGCCTG.................................................................................................................................................................................................... 201.000.00----------------------------------------------------------------------1.00----------------------------------
.............................................................................................................................................................................................................GGCCCACGAGTGCCTTTCACAGACGGC.................. 271.000.00----------------------------------------------------------------------------1.00----------------------------
.........................................................................................................................................................................................TTCTCTTTTCCACAGCGCCTGGCCCA....................................... 2611.001.00---------------------------------1.00-----------------------------------------------------------------------
.........................................................................................................................................................................................................GCCTGGCCCACGAGTGCCTTTCACAA....................... 260.500.00--------------------------0.50------------------------------------------------------------------------------