ID: uc009fep.2
GENE: Rps5(3)
chr7:13510901-13511135+


(1)
AGO.mut 		(3)
AGO1.ip 		(17)
AGO2.ip 		(2)
AGO3.ip 		(11)
B-CELL 		(23)
BRAIN 		(7)
CELL-LINE 		(2)
DCR.mut 		(1)
DGCR8.mut 		(12)
EMBRYO 		(13)
ESC 		(6)
FIBROBLAST 		(1)
HEART 		(1)
KIDNEY 		(6)
LIVER 		(4)
LYMPH 		(16)
OTHER 		(10)
OTHER.mut 		(2)
OVARY 		(7)
PIWI.ip 		(4)
PIWI.mut 		(6)
SKIN 		(9)
SPLEEN 		(38)
TESTES 		(3)
THYMUS 		(5)
TOTAL-RNA 		(1)
UTERUS

Sense strand
TGCGAATTGTCAAGCATGCCTTTGAGATCATCCACCTGCTCACTGGTGAGGTAAGGTTTTGTCCTTGATTCATACCAAAGCTTCATGGTATACATGCCAGGTTCATTACCTGGGACACCGCCACCTTGTTTAGGGTTGAAAAGGTTGGGGGTGGATATCAGGCTCACGCCTCCCTTTTCTGCCAGAACCCTCTGCAGGTCCTGGTGAATGCTATCATCAACAGTGGCCCCCGAGA
.....................................................................................................................................(((.((((((...(((((((((........)).))))))))))))).)))....................................................
.............................................................................................................................126........................................................185................................................
SizePerfect hitTotal NormPerfect NormAgo1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR014236(GSM319960)
10 dpp total. (testes)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		mjTestesWT3()
Testes Data. (testes)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR073954(GSM629280)
total RNA. (blood)		SRR037937(GSM510475)
293cand2. (cell line)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		mjTestesWT4()
Testes Data. (testes)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		GSM179088(GSM179088)
Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR059771(GSM562833)
CD4_control. (spleen)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR525240(SRA056111/SRX170316)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR553603(SRX182809)
source: Spermatids. (Spermatids)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR059774(GSM562836)
MEF_control. (MEF)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR014234(GSM319958)
Ovary total. (ovary)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR037910(GSM510447)
newborn_rep3. (total RNA)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR037902(GSM510438)
testes_rep3. (testes)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)		SRR060845(GSM561991)
total RNA. (brain)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR038744(GSM527279)
small RNA-Seq. (brain)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		GSM475281(GSM475281)
total RNA. (testes)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR037923(GSM510461)
e9p5_rep1. (embryo)		GSM510452(GSM510452)
newborn_rep8. (total RNA)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR065049(SRR065049)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (salivary gland)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		GSM314559(GSM314559)
ESC dgcr8 (454). (ESC)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
.....................................................................................................................................................................ACGCCTCCCTTTTCTGCCAGT.................................................211298.002.0047.004.00-29.00--19.0024.0010.002.0011.001.0014.00--1.00-10.00-11.00--1.004.00---6.002.001.001.002.00---3.00--4.005.00-2.005.00-4.00---6.001.004.00----1.00---3.001.003.002.004.00-1.004.003.00-2.003.00--1.001.001.001.00---3.00--2.00-------1.001.00---1.002.002.002.00-2.00--1.00--1.00-1.00----2.00--------------1.00--1.001.001.00----1.001.00-----1.001.00----1.001.00----1.001.00----
.................................................................................................................................................................................................GCAGGTCCTGGTGAATGCT.......................19131.0031.00-1.00------12.00--8.00----------3.00-----1.00-4.00------------------------------------------------1.00-1.00----------------------------------------------------------------------------------
.....................................................................................................................................................................ACGCCTCCCTTTTCTGCCAGTT................................................22124.002.008.001.00-1.00--2.003.00--1.00-------------------1.00------------------------1.00------------------------------1.00-1.001.00-----------------1.00----------------------------------1.00-------------1.00-------
.....................................................................................................................................................................ACGCCTCCCTTTTCTGCCAGA.................................................21123.0023.00-2.00-2.00----1.002.003.001.00---------------4.00--1.00----------------------3.00---------------------2.00----------------1.00------------------------------------------------1.00----------------------
.GCGAATTGTCAAGCATGCCTTT....................................................................................................................................................................................................................22123.0023.00-7.00------3.005.00-1.00---5.00------2.00---------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TCTGCAGGTCCTGGTGAATGCTATCATC.................28113.0013.00--6.00--5.00------------1.00--1.00----------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGG......................................................................................19113.0013.001.001.00----1.001.00-----3.00------------2.00-------------------------------------------------1.00------------1.00-------------------------------1.00--------------------------------1.00---------
......................................................................................................................................................................CGCCTCCCTTTTCTGCCAGT.................................................2011.000.003.001.00-1.00--------1.00--------------------------1.00----------------------1.00------------------------1.00------------------1.00---------------------1.00-----------------------------------
........GTCAAGCATGCCTTTGAGATC..............................................................................................................................................................................................................21211.0011.00-4.00------0.502.00-0.50---3.00--------------0.50--------------------------------------------------0.50----------------------------------------------------------------------------------
................TGCCTTTGAGATCATCCACCTGCTC..................................................................................................................................................................................................25111.0011.00-----1.00------------3.00----------2.00---1.00------1.001.00----------1.00------------------------1.00--------------------------------------------------------------------------------------
................TGCCTTTGAGATCATCCACCTGCTCA.................................................................................................................................................................................................26110.0010.00--4.00--3.00------------1.00--------------1.00--1.00-------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGGT...................................................................................2219.009.00-1.00--------2.00--1.00-----------------1.00---1.00--------------1.00-----1.00-----------------1.00-----------------------------------------------------------------------------------------
.................................................................................................................................................................................................GCAGGTCCTGGTGAATGC........................1819.009.00--------1.001.00-1.00--------------4.00-----------------1.00---------1.00-------------------------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGGTGG.................................................................................2419.009.00-------------1.00--------------------7.00---------------------1.00-----------------------------------------------------------------------------------------------------------
.GCGAATTGTCAAGCATGCCTT.....................................................................................................................................................................................................................2118.008.00-5.00-------2.00-1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................TGGTGAATGCTATCATCAACAGTGGCCC......2818.008.00------------------------------------4.00---------2.00------------------------------------------------1.00---------1.00----------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGGTGT.................................................................................2417.003.00-1.00--------1.00----1.00-----------------1.00----1.00-----1.00-------------------------------------------------------1.00---------------------------------------------------------------
...............................................................................................................................GTTTAGGGTTGAAAAAAA..........................................................................................187.000.00--------------------------------7.00-----------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TGCAGGTCCTGGTGAATG.........................1816.006.00----3.00--------2.00-----------------------------------1.00------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TGCAGGTCCTGGTGAATGC........................1916.006.00-------------1.002.00----------2.00-------------------1.00----------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................GCAGGTCCTGGTGAAT..........................1616.006.00-2.00------1.001.00------------2.00---------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................CTCTGCAGGTCCTGGTGAATGCTATC....................2616.006.00--1.00--1.00-------------------4.00------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TGCAGGTCCTGGTGAATGCTATCATC.................2616.006.00-----2.00------------1.00---------------------------------2.00----------------------------------------------------1.00----------------------------------------------------------
...................................................................................................................................................................................................................TATCATCAACAGTGGCCCCCGAGA2416.006.00--3.00--1.00------------------------------------------------------------------2.00-------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGG.......................................................................................1815.005.00---------------1.00-------------------3.00-----------------1.00--------------------------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGA......................................................................................1915.005.00------1.00----------------------------------------------------------------------1.00-----------------------------------------------------1.00-----------1.00------1.00-------------
......TTGTCAAGCATGCCTTTGAGATCATCCACC.......................................................................................................................................................................................................3015.005.00----------------2.00-----------------------------2.00----1.00----------------------------------------------------------------------------------------------------------------
..CGAATTGTCAAGCATGCCT......................................................................................................................................................................................................................1915.005.00----3.00--------1.00-----------------------------------------1.00------------------------------------------------------------------------------------------------------------
..CGAATTGTCAAGCATGCC.......................................................................................................................................................................................................................1815.005.00----5.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................ATCATCAACAGTGGCCCCCGAGA2315.005.00------------------------4.00--------------------------------1.00----------------------------------------------------------------------------------------------------------
.........TCAAGCATGCCTTTGAGATCATCCACCT......................................................................................................................................................................................................2815.005.00--1.00-------------1.00-----------------------1.001.00----------------1.00---------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TCTGCAGGTCCTGGTGAATGC........................2114.004.00-------------------------4.00------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................CACGCCTCCCTTTTCTGCCAGT.................................................224.000.002.00-----2.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGGTAA.................................................................................2414.009.00-----------------------3.00----1.00---------------------------------------------------------------------------------------------------------------------------------------
....................TTTGAGATCATCCACCT......................................................................................................................................................................................................1714.004.00----3.00----------------------------------------1.00----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................ACGCCTCCCTTTTCTGCCATT.................................................2114.003.001.00--1.00--1.00-------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................CCCTCTGCAGGTCCTGGTGAATGCTATC....................2813.003.00--1.00--2.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................CGCCTCCCTTTTCTGCCAGTT................................................213.000.00------------1.00----2.00--------------------------------------------------------------------------------------------------------------------------------------------------
..................CCTTTGAGATCATCCACC.......................................................................................................................................................................................................1813.003.00----2.00--------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................CCTGGTGAATGCTATCATC.................1913.003.00-------------2.001.00-----------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................TGCTATCATCAACAGTGGC........1913.003.00----3.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................TTGAGATCATCCACCTGCTCACTGGTGA..........................................................................................................................................................................................2813.003.00-----1.00---------------------------1.00--------------------------------------1.00-------------------------------------------------------------------------------------------
...............................................................................................................................................................................................CTGCAGGTCCTGGTGAATGCTATCATC.................2713.003.00-----2.00----------------------------------------------1.00---------------------------------------------------------------------------------------------------------------
.............................ATCCACCTGCTCACTGGTGAGAAC......................................................................................................................................................................................243.000.00--------------3.00-----------------------------------------------------------------------------------------------------------------------------------------------------
........GTCAAGCATGCCTTTGAGATCAT............................................................................................................................................................................................................2313.003.00--------1.00---------------------1.00------------------------------------------------1.00------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGGTAT.................................................................................2413.009.00----------------------------1.00--------------------------1.00--------------------1.00---------------------------------------------------------------------------------------
......TTGTCAAGCATGCCTTTGAGATCATCCA.........................................................................................................................................................................................................2813.003.00----------------1.00---1.00-------------------------1.00---------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................ACGCCTCCCTTTTCTGCCA...................................................1913.003.00-------------------------------------------------------------1.00-----------------------------------------1.00-----1.00------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGGTG..................................................................................2313.003.00--------------1.00----------------------------------------------------------------------1.00----1.00-------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGG.....................................................................................2013.003.00-------------------------------1.00-------------------------------------1.00-------------------------------------------1.00--------------------------------------------------
.................................................................................................................................TTAGGGTTGAAAAGGTTGG.......................................................................................1913.003.00---1.00--------------------------------------------------------------------------2.00-------------------------------------------------------------------------------------
.....................TTGAGATCATCCACCTGCTCACTGGT............................................................................................................................................................................................2612.002.00------------------1.00--------------1.00----------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGAA...................................................................................2212.003.00----------------------------------------------------------------------------------------------------1.00----------------------1.00----------------------------------------
..................CCTTTGAGATCATCCACCT......................................................................................................................................................................................................1912.002.00----2.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................GGTCCTGGTGAATGCTATC....................1912.002.00-------------------------------------------2.00------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TCTGCAGGTCCTGGTGAAT..........................1912.002.00----------------------1.00--------------------------1.00------------------------------------------------------------------------------------------------------------------
.....................TTGAGATCATCCACCTGCTCACTG..............................................................................................................................................................................................2412.002.00--------------2.00-----------------------------------------------------------------------------------------------------------------------------------------------------
..................CCTTTGAGATCATCCACCTGCTCACT...............................................................................................................................................................................................2612.002.00--1.00--------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................TGCTATCATCAACAGTGGCCCCCGAGA2712.002.00--1.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................GGTCCTGGTGAATGCTATCATC.................2212.002.00-----------------2.00--------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................ACGCCTCCCTTTTCTGCCAGTA................................................2212.002.00-------------------1.00---------------------------------------------------------------------------------------------------------------------------------------1.00--------
...............................................................................................................................................................................................CTGCAGGTCCTGGTGAATGC........................2012.002.00---------------------------------------------------------1.00--------------------------------------------------------------------1.00-------------------------------------
.....................................................................................................................................GGTTGAAAAGGTTGGGGGTG..................................................................................2012.002.00--------------------------2.00-----------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................CGCCTCCCTTTTCTGCCAGTA................................................212.000.00-2.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
..........................ATCATCCACCTGCTCACTGGT............................................................................................................................................................................................2112.002.00-----------------------------------------------------------------------------1.00---------------------------------------1.00----------------------------------------------
.............................................................................................................................................................................................................GAATGCTATCATCAACAGTGG.........2112.002.00----1.00-----------------------------------------------------------------------------------------------------------------------------1.00---------------------------------
...................................................................................................................................................................................................................TATCATCAACAGTGGCCCCCGCGAA252.000.00--2.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................ACGCCTCCCTTTTCTGCCAG..................................................2012.002.00-------------------------------------------------------------------------------------1.00----------1.00-------------------------------------------------------------------
.................GCCTTTGAGATCATCCACCTGC....................................................................................................................................................................................................2212.002.00---------1.00----------------------------------------------------------------------------------------------1.00-----------------------------------------------------------
.....................................................................................................................................................................ACGCCTCCCTTTTCTGCCAGAT................................................2212.0023.001.00------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGGTGTT................................................................................2512.003.00-------------------1.00----------------------------------------------------------------------1.00-------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGA.....................................................................................2012.0013.00------2.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
......................TGAGATCATCCACCTGCTCACT...............................................................................................................................................................................................2212.002.00------------------------1.00--------------------1.00----------------------------------------------------------------------------------------------------------------------
.GCGAATTGTCAAGCATGCCT......................................................................................................................................................................................................................2012.002.00-----------1.00---------------------------------------------------------------------1.00----------------------------------------------------------------------------------
...................................................................................................................................AGGGTTGAAAAGGTTGGGGGT...................................................................................2112.002.00----------------------------------------------------------------------------------------------------------------2.00---------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGGTGC.................................................................................2412.003.00-----------------------------------------------------------------------------------------------------------------1.00-----------------------------------1.00--------------
......TTGTCAAGCATGCCTTTGAGA................................................................................................................................................................................................................2112.002.00-1.00---------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
................TGCCTTTGAGATCATCCACCTGCTCACT...............................................................................................................................................................................................2812.002.00--1.00--1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TCTGCAGGTCCTGGTGAATGCTATCATCA................2912.002.00--1.00-------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................GCAGGTCCTGGTGAATGCTTT.....................2112.0031.00--------------------------2.00-----------------------------------------------------------------------------------------------------------------------------------------
......TTGTCAAGCATGCCTTTGAGATCATCCAC........................................................................................................................................................................................................2912.002.00--------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------1.00---
..............................TCCACCTGCTCACTGGTGAGAAC......................................................................................................................................................................................232.000.00----2.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................AAGGTTGGGGGTGGATATCA...........................................................................2012.002.00----2.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................CCTCCCTTTTCTGCCAGT.................................................182.000.00-------1.00--1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGGA...................................................................................2212.001.00-------1.00-------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................AGGTCCTGGTGAATGCTA......................1812.002.00--------------------------------------------------------------------2.00-----------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................AATGCTATCATCAACAGTGG.........2012.002.00-----------------------------------------------------1.00------------------------------------------------1.00-------------------------------------------------------------
...............................................................................................................................................................................................CTGCAGGTCCTGGTGAATGT........................2012.001.00-----------------------------------------------------------------2.00--------------------------------------------------------------------------------------------------
.....................TTGAGATCATCCACCTGCT...................................................................................................................................................................................................1912.002.00---------------------------------------------2.00----------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TGCAGGTCCTGGTGAATGCTATCA...................2412.002.00--------------------1.00-------1.00---------------------------------------------------------------------------------------------------------------------------------------
.......................GAGATCATCCACCTGCTCACT...............................................................................................................................................................................................2121.501.50-----------0.50----------0.50--------------------------------------------------------------------------------------------0.50------------------------------------------------
.......................GAGATCATCCACCTGCTC..................................................................................................................................................................................................1821.501.50--------0.50------0.50------------0.50---------------------------------------------------------------------------------------------------------------------------------------
...........AAGCATGCCTTTGAGATC..............................................................................................................................................................................................................1821.501.50--------0.500.50-----0.50----------------------------------------------------------------------------------------------------------------------------------------------------
........GTCAAGCATGCCTTTGAGATCATCC..........................................................................................................................................................................................................2511.001.00------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
...........................TCATCCACCTGCTCACTGGTGAG.........................................................................................................................................................................................2311.001.00-------------------------------------------------------------------------------------------------------------------1.00------------------------------------------------
.....................................................................................................................................................................ACGCCTCCCTTTTCTGCCAGTC................................................2211.002.00------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGT....................................................................................2111.003.00----------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................CGCCTCCCTTTTCTGCCAGA.................................................2011.001.00------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
..............CATGCCTTTGAGATCATCCACC.......................................................................................................................................................................................................2211.001.00-------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------
.......TGTCAAGCATGCCTTTGAGATCATCC..........................................................................................................................................................................................................2611.001.00------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------
............AGCATGCCTTTGAGATCAT............................................................................................................................................................................................................1911.001.00----------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
.............................ATCCACCTGCTCACTGGTGAGA........................................................................................................................................................................................221.000.00---------------------------------------------1.00----------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGGTGTATA..............................................................................2711.003.00-------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------
............AGCATGCCTTTGAGATCATCCACCTGCTC..................................................................................................................................................................................................2911.001.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGGAGTA................................................................................2511.001.00---------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------
........................AGATCATCCACCTGCTCACTGGT............................................................................................................................................................................................2311.001.00--------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TGCAGGTCCTGGTGAATGCTATCATCA................2711.001.00------------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------
.....................................................................................................................................................................ACGCCTCCCTTTTCTGCAAGT.................................................211.000.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......TGTCAAGCATGCCTTTGAGATCATC...........................................................................................................................................................................................................2511.001.00-------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------
...................................................................................................................................AGGGTTGAAAAGGTTGGGGGGGT.................................................................................231.000.00----------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGGTGGAAT..............................................................................2711.001.00--------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
........GTCAAGCATGCCTTTGAGATCA.............................................................................................................................................................................................................2221.001.00-----------0.50----------0.50---------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................CGCCTCCCTTTTCTGCCCGT.................................................201.000.00------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
...GAATTGTCAAGCATGCCTTTGAGATC..............................................................................................................................................................................................................2611.001.00-----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................GGGTTGAAAAGGTTGGGGGTGG.................................................................................2211.001.00-------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------
..........CAAGCATGCCTTTGAGATCATCCACCT......................................................................................................................................................................................................2711.001.00----------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
...............ATGCCTTTGAGATCATCCA.........................................................................................................................................................................................................1911.001.00----------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
...........AAGCATGCCTTTGAGATCATCCAC........................................................................................................................................................................................................2411.001.00--------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TATCATCAACAGTGGCCCCCGAGCAG2611.001.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................GAACCCTCTGCAGGTCCTGGTG.............................2211.001.00-------------------------------------------------------------------1.00------------------------------------------------------------------------------------------------
..........................ATCATCCACCTGCTCACTGGTGAGA........................................................................................................................................................................................251.000.00--------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.....................TTGAGATCATCCACCTGCTCACTGGTGAGAACC.....................................................................................................................................................................................331.000.00-------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................AGGTTGGGGGTGGATATCAGGC........................................................................2211.001.00------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................TGAATGCTATCATCAACAGTGGC........2311.001.00------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AACAGTGGCCCCCGAGAAA1911.001.00-----------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
......TTGTCAAGCATGCCTTTGAGATCATCCACCTGCTA..................................................................................................................................................................................................351.000.00-----------------------------------------------------------------------------------------------------------------------------------------1.00--------------------------
......................................................................................................................................................................CGCCTCCCTTTTCTGCCCGTT................................................211.000.00-------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................CATCAACAGTGGCCCCCG...1811.001.00---------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
......TTGTCAAGCATGCCTTTGAGATCATCC..........................................................................................................................................................................................................2711.001.00------------------------------------------------------------------------------------------------------------------------------------------------1.00-------------------
.........................................................................................................................................................................................AACCCTCTGCAGGTCCTG................................1811.001.00----------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------
....................................................................................................................................................................................................GGTCCTGGTGAATGCTATCATCAACAGTG..........2911.001.00----------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................AACCCTCTGCAGGTCCTGGTGAATGC........................2611.001.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................ATCAACAGTGGCCCCCGA..1811.001.00------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
................TGCCTTTGAGATCATCCACC.......................................................................................................................................................................................................2011.001.00-------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------
..................................................................................................................................................................................................CAGGTCCTGGTGAATGCT.......................1811.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TATCATCAACAGTGGCCCCCGAGAAGT2711.006.00------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
................TGCCTTTGAGATCATCCACCTGCTCACTG..............................................................................................................................................................................................2911.001.00---------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................ACGCCTCCCTTTTCTGCCAGC.................................................2111.002.00------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
......TTGTCAAGCATGCCTTTGAGATCA.............................................................................................................................................................................................................2411.001.00-----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
...........AAGCATGCCTTTGAGATCAT............................................................................................................................................................................................................2011.001.00---------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
......................TGAGATCATCCACCTGCTCACTGGTGA..........................................................................................................................................................................................2711.001.00--------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
......................TGAGATCATCCACCTGCT...................................................................................................................................................................................................1811.001.00---------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGGTTAT................................................................................2511.009.00----------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGGTGTA................................................................................2511.003.00-------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................CTCTGCAGGTCCTGGTGAATGC........................2211.001.00------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
................TGCCTTTGAGATCATCCACCTGCTCAC................................................................................................................................................................................................2711.001.00-----------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................CAGGTCCTGGTGAATGCTA......................1911.001.00-----------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................AACAGTGGCCCCCGAGA1711.001.00---------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
...........................TCATCCACCTGCTCACTG..............................................................................................................................................................................................1811.001.00------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................GCAGGTCCTGGTGAATGCTA......................2011.001.00-------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................CTGCAGGTCCTGGTGAATGCTATCATCC................2811.003.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
................TGCCTTTGAGATCATCCACCTGCTCACG...............................................................................................................................................................................................2811.001.00---------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................CCTCTGCAGGTCCTGGTGAAT..........................2111.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......TGTCAAGCATGCCTTTGAGATCATCCACCT......................................................................................................................................................................................................3011.001.00---------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
.GCGAATTGTCAAGCATGCCTTTGA..................................................................................................................................................................................................................2411.001.00---------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGGTGGA................................................................................2511.001.00------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................CTCTGCAGGTCCTGGTGAATGCTATCATC.................2911.001.00----------------------------------------------------------------------------------------------------------------------------------------------------1.00---------------
...............................................................................................................................................................................................CTGCAGGTCCTGGTGAATTCT.......................211.000.00--------------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGG....................................................................................2111.001.00---------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TCTGCAGGTCCTGGTGAATGCTA......................2311.001.00--------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
....................TTTGAGATCATCCACCTGCT...................................................................................................................................................................................................2011.001.00----------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------
.......TGTCAAGCATGCCTTTGAGATC..............................................................................................................................................................................................................2211.001.00--------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------
...........AAGCATGCCTTTGAGATCATCC..........................................................................................................................................................................................................2211.001.00-------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
.......TGTCAAGCATGCCTTTGAGA................................................................................................................................................................................................................2011.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................AGGGTTGAAAAGGTTGGGGGTGG.................................................................................2311.001.00-------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................CTCCCTTTTCTGCCAGT.................................................171.000.00------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------
..CGAATTGTCAAGCATGCCTTTGAG.................................................................................................................................................................................................................2411.001.00-------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................ACGCCTCCCTTTTCTGCCCGT.................................................211.000.00------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................TGGATATCAGGCTCACGC..................................................................1811.001.00-------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................CTGGTGAATGCTATCATCAACAGTG..........2511.001.00------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................TTGAAAAGGTTGGGGGTGGATA..............................................................................2211.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------1.00------
...................................................................................................................................AGGGTTGAAAAGGTTGGGGGTGTTTT..............................................................................261.000.00----------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TATCATCAACAGTGGCCCCCGAGAC2511.006.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................TGAATGCTATCATCAACAGTGGCCCC.....2611.001.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
.................GCCTTTGAGATCATCCACCT......................................................................................................................................................................................................2011.001.00-----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.......TGTCAAGCATGCCTTTGAGATCATCCAC........................................................................................................................................................................................................2811.001.00-----------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------
.....ATTGTCAAGCATGCCTTTGAGAT...............................................................................................................................................................................................................2311.001.00----------------------------------------------------------------------------------1.00---------------------------------------------------------------------------------
......TTGTCAAGCATGCCTTTGAGATC..............................................................................................................................................................................................................2311.001.00----------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................CTATCATCAACAGTGGCCCCCGAGA2511.001.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................CTGGTGAATGCTATCATC.................1811.001.00------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................AGGGTTGAAAAGGTTGGGGGTGAA................................................................................241.000.00----------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------
..................................................................................................................................................................................................CAGGTCCTGGTGAATGC........................1711.001.00-------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
.......TGTCAAGCATGCCTTTGAGATCATCCACC.......................................................................................................................................................................................................2911.001.00---------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------
........GTCAAGCATGCCTTTGAGATCATCCACC.......................................................................................................................................................................................................2811.001.00------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
.............................................................TCCTTGATTCATACCTTT............................................................................................................................................................181.000.00--------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGGTGA.................................................................................2411.003.00----------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................AAGGTTTTGTCCTTGCCTT....................................................................................................................................................................191.000.00---------------------------------------------------------------------------------------1.00----------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGGATTA................................................................................2511.001.00---------------------------------------------------------------------------------------------1.00----------------------------------------------------------------------
.........................................................................................................................................................................CTCCCTTTTCTGCCACCA................................................181.000.00-------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------
..................CCTTTGAGATCATCCACCTGCT...................................................................................................................................................................................................2211.001.00------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................CACGCCTCCCTTTTCTGCCAGA.................................................2211.001.00--------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------
......................................................................................................................................................................CGCCTCCCTTTTCTGCCAGTAT...............................................221.000.00-------------------------------------------------------------------------1.00------------------------------------------------------------------------------------------
.....................................................................................................................................GGTTGAAAAGGTTGGGT.....................................................................................171.000.00-------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................AACCCTCTGCAGGTCCTGG...............................1911.001.00----------1.00---------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TATCATCAACAGTGGCCCCCGAGAT2511.006.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
.....ATTGTCAAGCATGCCTTTGAGATCATCT..........................................................................................................................................................................................................281.000.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGGTGAT................................................................................2511.003.00------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------
....AATTGTCAAGCATGCCTTT....................................................................................................................................................................................................................1911.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TATCATCAACAGTGGCCCCCGCGCA251.000.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGA....................................................................................2111.003.00---------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
...................................................................................................................................AGGGTTGAAAAGGTTGGGGGTGTT................................................................................241.000.00----------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------
.........TCAAGCATGCCTTTGAGATCATCCA.........................................................................................................................................................................................................2511.001.00-------------------------------------1.00------------------------------------------------------------------------------------------------------------------------------
.GCGAATTGTCAAGCATGCCTTTGAGATC..............................................................................................................................................................................................................2811.001.00---------------------------------------------------------------------------------------------------------------------------------------1.00----------------------------
................................................................................................................................................TTGGGGGTGGATATCAGGCT.......................................................................2011.001.00-------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
...........AAGCATGCCTTTGAGATCATCCACCTG.....................................................................................................................................................................................................2711.001.00------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
................TGCCTTTGAGATCATCCACCTG.....................................................................................................................................................................................................2211.001.00----------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................CAGGTCCTGGTGAATGCTTTT....................2111.001.00--------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................CCTCTGCAGGTCCTGAGT.............................181.000.00-------------------------------1.00------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TATCATCAACAGTGGCCCCCGAGCA2511.001.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................TTAGGGTTGAAAAGGTTGGG......................................................................................2011.001.001.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TATCATCAACAGTGGCCCCCGAGCC2511.001.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................TGCTATCATCAACAGTGGCCCCCGATT271.000.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................ACATGCCAGGTTCATTACCTGG..........................................................................................................................2211.001.00---------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................TTGGGGGTGGATATCAGGC........................................................................1911.001.00-----------------------------------------------------------------1.00--------------------------------------------------------------------------------------------------
..CGAATTGTCAAGCATGCCTT.....................................................................................................................................................................................................................2011.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TCTGCAGGTCCTGGTGAATGTT.......................221.000.00------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
....................TTTGAGATCATCCACCTGCTCACTGG.............................................................................................................................................................................................2611.001.00-----------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
..CGAATTGTCAAGCATGCCTTTGAGATC..............................................................................................................................................................................................................2711.001.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TATCATCAACAGTGGCCCCCGAGAAA2611.006.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
..............CATGCCTTTGAGATCATCCACCTGCTC..................................................................................................................................................................................................2711.001.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................GATCATCCACCTGCTCACTGGTGAGAAC......................................................................................................................................................................................281.000.00------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
.................GCCTTTGAGATCATCCACCA......................................................................................................................................................................................................201.000.00--------------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGGTGTAA...............................................................................2611.003.00-----------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGTAA....................................................................................2111.005.00----------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................TGGTGAATGCTATCATCAACAGTGGC........2611.001.00------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................GGGTTGAAAAGGTTGGGGGTGGAAA..............................................................................251.000.00----------------------------------------------------------------------------------------------------------1.00---------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGTAA...................................................................................2211.0013.00-------------------------------------------------------------------------------------------------------1.00------------------------------------------------------------
...................................................................................................................................................................................................................TATCATCAACAGTGGCCCCCGGGAA251.000.00--------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------
...................................................................................................................................................................................................................TATCATCAACAGTGGCCCCCGAGC2411.001.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
.....................TTGAGATCATCCACCTGCTCACTAGTG...........................................................................................................................................................................................271.000.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TCTGCAGGTCCTGGTGAATGCT.......................2211.001.00-------------------------------------------1.00------------------------------------------------------------------------------------------------------------------------
......................TGAGATCATCCACCTGCTCACTGGTGT..........................................................................................................................................................................................271.000.00------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGGTATT................................................................................2511.009.00---------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................ACCCTCTGCAGGTCCTGGTATTT..........................231.000.00----------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------
..............................................................................................................................................................................................TCTGCAGGTCCTGGTGAA...........................1811.001.00------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
.GCGAATTGTCAAGCATGGC.......................................................................................................................................................................................................................191.000.00-------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................ACCCTCTGCAGGTCCTGGTGAATGCTAT.....................2811.001.00------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................CTGGTGAATGCTATCTT..................171.000.00--------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................ACGCCTCCCTTTTCTGCCAGTAGT..............................................2411.002.00-----------------------------------------------------------1.00--------------------------------------------------------------------------------------------------------
....................TTTGAGATCATCCACCTGCTCACTGGT............................................................................................................................................................................................2711.001.00------------------------------------------------------------1.00-------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................TCATCAACAGTGGCCCCCGAGACGA251.000.00--------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------------
....................TTTGAGATCATCCACCTGCTCACTGGTGAGA........................................................................................................................................................................................311.000.00----------------------------------------------------------1.00---------------------------------------------------------------------------------------------------------
..CGAATTGTCAAGCATGC........................................................................................................................................................................................................................1711.001.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGAAT...................................................................................2211.0013.00-1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGGTTTAG...............................................................................2611.009.00------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TCTGCAGGTCCTGGTGAATA.........................2011.002.00--------------------------------------------------------------------------------------1.00-----------------------------------------------------------------------------
...................................................................................................................................................................................................AGGTCCTGGTGAATGCTAAC....................2011.002.00----------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TATCATCAACAGTGGCCCCCGAG.2311.001.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................TTAGGGTTGAAAAGGTTGGGGGTAAT................................................................................261.000.00-----------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................CTGCAGGTCCTGGTGAATG.........................1911.001.00--------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................GCAGGTCCTGGTGAATGCTATC....................2211.001.00-----------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------
................................................................................................................................................................................................................TGCTATCATCAACAGTGGCCCCCCAG.261.000.00---------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................GCTATCATCAACAGTGGCCCCC....2211.001.00-----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
............AGCATGCCTTTGAGATCATCCACCTG.....................................................................................................................................................................................................2611.001.00-----------------------------1.00--------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................TGAATGCTATCATCAACAGTGGCC.......2411.001.00----------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
.GCGAATTGTCAAGCATGCCTTTGAGA................................................................................................................................................................................................................2611.001.00---------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
......................TGAGATCATCCACCTGC....................................................................................................................................................................................................1711.001.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................GAACCCTCTGCAGGTCCTGGTGAATGC........................2711.001.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TGCAGGTCCTGGTGAATGCTAT.....................2211.001.00----------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------
....................................................................................................................................................................................................GGTCCTGGTGAATGCTATT....................191.000.00--------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGGTGGTAA..............................................................................2711.009.00----------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................TGCTATCATCAACAGTG..........1721.001.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
......................TGAGATCATCCACCTGCTCACTGGT............................................................................................................................................................................................2511.001.00---------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TCTGCAGGTCCTGGTGAATGCTATCATCT................2911.0013.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................CCCTCTGCAGGTCCTGGTG.............................1911.001.00-----------------------1.00--------------------------------------------------------------------------------------------------------------------------------------------
..........CAAGCATGCCTTTGAGATCATCCACC.......................................................................................................................................................................................................2611.001.00-------------------------------------------------------------------------------------------------------------------------------1.00------------------------------------
..................................................................................................................................TAGGGTTGAAAAGGTTGGGGGTGAA................................................................................2511.003.00-------------------------------------------------------1.00------------------------------------------------------------------------------------------------------------
.............GCATGCCTTTGAGATCATCCACCTGCTC..................................................................................................................................................................................................2811.001.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................TTTAGGGTTGAAAAGGTTG........................................................................................1911.001.00------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------------
..........................................................................................................................................................................................................GGTGAATGCTATCATCAAC..............1911.001.00-----------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................TATCATCAACAGTGGCCCCCGAGCAT2611.001.00-----1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
........GTCAAGCATGCCTTTGAGA................................................................................................................................................................................................................1921.001.00-0.50-----------------------------------------------0.50------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................AAAGGTTGGGGGTGGATC..............................................................................181.000.00-------------------------------------------------------------------------------------------------------------------------------------------------1.00------------------
.........................................................................................................................................................................................................TGGTGAATGCTATCATCAACAGTGGCC.......2711.001.00-----------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------
...................CTTTGAGATCATCCACCTGCTCACTGG.............................................................................................................................................................................................2711.001.00----------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------
................................................................................................................................................................................................TGCAGGTCCTGGTGAATTT........................191.000.00-------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------
..........CAAGCATGCCTTTGAG.................................................................................................................................................................................................................1660.670.67----------0.50--------------------------------------------------------------------------------------------------------------------------------------------------------0.17
....................................................................................................................................................................................................................ATCATCAACAGTGGCC.......1630.670.67--------------------------------------------------------------------0.67-----------------------------------------------------------------------------------------------
............................................................................................................................................................................................CCTCTGCAGGTCCTGGT..............................1720.500.50--------------0.50-----------------------------------------------------------------------------------------------------------------------------------------------------
.................GCCTTTGAGATCATCCA.........................................................................................................................................................................................................1720.500.50----0.50---------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................GAGATCATCCACCTGCT...................................................................................................................................................................................................1720.500.50---------0.50----------------------------------------------------------------------------------------------------------------------------------------------------------
.................................ACCTGCTCACTGGTGAG.........................................................................................................................................................................................1720.500.50--------------------------------------------------------0.50-----------------------------------------------------------------------------------------------------------
.........TCAAGCATGCCTTTGAGA................................................................................................................................................................................................................1820.500.50--------0.50-----------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................AGGTCCTGGTGAATGC........................1620.500.50----------------------------------------------------------------------------------0.50---------------------------------------------------------------------------------
..........CAAGCATGCCTTTGAGATC..............................................................................................................................................................................................................1920.500.50---------0.50----------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................AGGTCCTGGTGAATGCT.......................1720.500.50-0.50------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................GCTATCATCAACAGTG..........1620.500.50-----------------------------------------------------------------------------------------------------------------------------------------------------------------0.50--
...............................................................................................................................................GTTGGGGGTGGATATC............................................................................1650.400.40-----------------------------------------------------------------------------------0.40--------------------------------------------------------------------------------
................................................................................................................................................................................................TGCAGGTCCTGGTGAA...........................1630.330.33------------------------------------------------------------------------------------------------------------------------------------------------------------------0.33-
...........AAGCATGCCTTTGAGA................................................................................................................................................................................................................1640.250.25---------------------------------------------------------0.25----------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................GAACCCTCTGCAGGTC...................................1660.170.17----------0.17---------------------------------------------------------------------------------------------------------------------------------------------------------
..................................CCTGCTCACTGGTGA..........................................................................................................................................................................................1580.120.12---------------------------------------------------------0.12----------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................TGCAGGTCCTGGTGA............................1590.110.11-------------------------------------0.11------------------------------------------------------------------------------------------------------------------------------

Antisense strand
TGCGAATTGTCAAGCATGCCTTTGAGATCATCCACCTGCTCACTGGTGAGGTAAGGTTTTGTCCTTGATTCATACCAAAGCTTCATGGTATACATGCCAGGTTCATTACCTGGGACACCGCCACCTTGTTTAGGGTTGAAAAGGTTGGGGGTGGATATCAGGCTCACGCCTCCCTTTTCTGCCAGAACCCTCTGCAGGTCCTGGTGAATGCTATCATCAACAGTGGCCCCCGAGA
.....................................................................................................................................(((.((((((...(((((((((........)).))))))))))))).)))....................................................
.............................................................................................................................126........................................................185................................................
SizePerfect hitTotal NormPerfect NormAgo1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR014236(GSM319960)
10 dpp total. (testes)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		mjTestesWT3()
Testes Data. (testes)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR073954(GSM629280)
total RNA. (blood)		SRR037937(GSM510475)
293cand2. (cell line)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		mjTestesWT4()
Testes Data. (testes)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		GSM179088(GSM179088)
Developmentally regulated piRNA clusters implicate MILI in transposon control. (piwi testes)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR059771(GSM562833)
CD4_control. (spleen)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR525240(SRA056111/SRX170316)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR553603(SRX182809)
source: Spermatids. (Spermatids)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR059774(GSM562836)
MEF_control. (MEF)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR014234(GSM319958)
Ovary total. (ovary)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR037910(GSM510447)
newborn_rep3. (total RNA)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR037902(GSM510438)
testes_rep3. (testes)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)		SRR060845(GSM561991)
total RNA. (brain)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR038744(GSM527279)
small RNA-Seq. (brain)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		GSM475281(GSM475281)
total RNA. (testes)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR037923(GSM510461)
e9p5_rep1. (embryo)		GSM510452(GSM510452)
newborn_rep8. (total RNA)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR065049(SRR065049)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (salivary gland)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		GSM314559(GSM314559)
ESC dgcr8 (454). (ESC)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
.............................................................................................................................................................................................CTCTGCAGGTCCTGGTGAATGCTATCATC................. 2916.006.00-----------------------------------------------6.00--------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................CTTTTCTGCCAGAACCCTCTGCA....................................... 2315.005.00----5.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TCTGCAGGTCCTGGTGTAGT......................... 202.000.00-----------------------------------------2.00--------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................TCTGCAGGTCCTGGTGAATGCTATCATC................. 2811.001.00-------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------
..............................................................CCTTGATTCATACCACAC........................................................................................................................................................... 181.000.00------------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------
.........................GATCATCCACCTGCTCACTGGTGAGGTA...................................................................................................................................................................................... 2811.001.00---------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------
....AATTGTCAAGCATGCCTTTGAGATCATC........................................................................................................................................................................................................... 2811.001.00--------------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................TTACCTGGGACACCGGAG................................................................................................................ 181.000.00------------------------------------------------------------------------------------------------------------------------------------------1.00-------------------------
............................................................................................................................................................................CCTTTTCTGCCAGAAAGT............................................. 181.000.00------------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------