ID: uc009dtd.3
GENE: Ing4(4)
chr6:124997294-124997549+


(1)
AGO.mut 		(2)
AGO1.ip 		(11)
AGO2.ip 		(1)
AGO3.ip 		(8)
B-CELL 		(23)
BRAIN 		(6)
CELL-LINE 		(2)
DCR.mut 		(2)
DGCR8.mut 		(9)
EMBRYO 		(9)
ESC 		(2)
FIBROBLAST 		(2)
KIDNEY 		(3)
LIVER 		(4)
LYMPH 		(12)
OTHER 		(6)
OTHER.mut 		(1)
PANCREAS 		(2)
PIWI.ip 		(2)
PIWI.mut 		(4)
SKIN 		(7)
SPLEEN 		(16)
TESTES 		(2)
THYMUS 		(2)
UTERUS

Sense strand
ACAGATCGAGTCCAGTGACTATGACAGCTCTTCTAGCAAAGGCAAAAAGAGTGAGGAGGGGCGGGGCTGTGAGATGCGGGCAAGGAGTCAGAGGGAGAAGAGGCCAACTCCAGCTAGGAGGGAGCGGCACTGCCTGGACCAGGAGCAAAGAGAACTTAACCCATCTTTTTGTCTCTGCCTCCCGGCTTACCCTTTCTTCCTAGAAGGCCGGACCCAAAAGGAGAAAAAAGCTGCCAGAGCCCGTTCCAAAGGGAAA
.................................................................................................................(((((((((((.((....(((.(((.(((..(((((((((..........)))))))))..)))..))).)))...)).))))))))))).....................................................
.............................................................................................................110.............................................................................................206................................................
SizePerfect hitTotal NormPerfect NormSRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR023847(GSM307156)
mESv6.5smallrna_rep1. (cell line)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR073954(GSM629280)
total RNA. (blood)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR206940(GSM723281)
other. (brain)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR073955(GSM629281)
total RNA. (blood)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR059771(GSM562833)
CD4_control. (spleen)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR206939(GSM723280)
other. (brain)		GSM475279(GSM475279)
Miwi-IP. (miwi testes)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		mjTestesWT3()
Testes Data. (testes)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR553585(SRX182791)
source: Kidney. (Kidney)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGGACCAGGAGCAAAGAGAACTTAACCCATCTTTTTGTCTCTGCCTCCCGGCTTACCCTTTCTTCCTAGA....................................................90154.0054.0054.00-------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................CTTACCCTTTCTTCCTAGAAGT.................................................22121.003.00----------1.00-----------1.00---2.00--2.00---1.002.00----2.00------2.00------1.00--------1.00---1.00---------1.00-1.00-----------1.00--1.00-----1.00----------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGG.......................................................................................................................23115.0015.00-1.00---5.00-----1.00---2.00-----------2.00----1.00---------------1.00----------1.00--------------------------------------------1.00-----
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGGA......................................................................................................................24112.0012.00-1.00-1.00-------1.00---1.00----2.00--1.00---------1.00-------------1.00--------1.00----------------------------------1.00---1.00--------------
.....................................................................................................................................................................................CCGGCTTACCCTTTCTTCCTAGAAG..................................................25112.0012.00--2.00-1.00---1.002.00------------1.00-1.00------------1.001.00------------------------------------1.00--------------------------1.00-------
..................................................................................................................TAGGAGGGAGCGGCACTGCCT.........................................................................................................................21111.0011.00-2.00-2.003.00--1.001.00----------------------------------------------------------------------------1.00------1.00-----------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGGACCAGGAGCAAAGAGAACTTAACCCATCTTTTTGTCTCTGCCTCCCGGCTTACCCTTTCTTCCTAGT....................................................90111.006.0011.00-------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................CGGCTTACCCTTTCTTCCTAGA....................................................2219.009.00----------1.001.00-5.00------1.00-----------------------------------------------------------------------------1.00-----------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGA.......................................................................................................................2317.002.00----------1.00-----------------2.00-1.00-1.00------------1.00------------------1.00---------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGGACCAGGAGCAAAGAGAACTTAACCCATCTTTTTGTCTCTGCCTCCCGGCTTACCCTTTCTTCCTAG.....................................................8916.006.006.00-------------------------------------------------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGGAT.....................................................................................................................2515.0012.00-1.00-1.00-1.00-----------------------------------------------------------1.00-------------1.00------------------------------
....................................................................................................................................................................................CCCGGCTTACCCTTTCTTCCTAGAAG..................................................2614.004.00--------------1.00---2.00------------------1.00------------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGGTA.....................................................................................................................2514.0015.00----------------4.00---------------------------------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGGAA.....................................................................................................................2514.0012.00-------------------3.00---------------------------------------------------------1.00--------------------------------
.................................................................................................................CTAGGAGGGAGCGGCACTGCCTGGACCAGGAGCAAAGAGAACTTAACCCATCTTTTTGTCTCTGCCTCCCGGCTTACCCTTTCTTCCTAGA....................................................9114.004.004.00-------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................CTTACCCTTTCTTCCTAGAAG..................................................2113.003.00--------1.00-------------------------------------------1.00----1.00----------------------------------------------------
....ATCGAGTCCAGTGACTATGACAGC....................................................................................................................................................................................................................................2413.003.00------3.00-------------------------------------------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCC..........................................................................................................................2013.003.00----1.00----------------------------------------------1.00-----------------------------------------------------1.00----
......................................................................................................................................................................................CGGCTTACCCTTTCTTCCTAGAAG..................................................2413.003.00--------------1.00-----------------------------------------------------------1.00-----1.00-----------------------------
.....................................................................................................................................................................................CCGGCTTACCCTTTCTTCCTAGAA...................................................2413.003.00---------1.00---------------------------------------------1.00-----1.00------------------------------------------------
.....TCGAGTCCAGTGACTATGACA......................................................................................................................................................................................................................................2113.003.00------------3.00-------------------------------------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGT...........................................................................................................................193.000.00--------------------------------------------2.00----------------------------1.00------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGGAAA....................................................................................................................2613.0012.00-2.00-------1.00----------------------------------------------------------------------------------------------------
...............................................................................................................................CACTGCCTGGACCAGGAGCAAAGA.........................................................................................................2412.002.00-----------------------2.00--------------------------------------------------------------------------------------
.....................................................................................................................................................................................CCGGCTTACCCTTTCTTCCTAGC....................................................2312.001.00----------------------------------------1.001.00--------------------------------------------------------------------
.....................................................................TGAGATGCGGGCAAGGA..........................................................................................................................................................................1712.002.00------2.00-------------------------------------------------------------------------------------------------------
..................................................................................................................................TGCCTGGACCAGGAGCAAAGA.........................................................................................................2112.002.00---1.00-----------------1.00----------------------------------------------------------------------------------------
................................................................................................................GCTAGGAGGGAGCGGCACTGA...........................................................................................................................212.000.00-------------------------------2.00------------------------------------------------------------------------------
.........................................GCAAAAAGAGTGAGGAGGGGCGGGG..............................................................................................................................................................................................2512.002.00------------------------------------------2.00-------------------------------------------------------------------
...........CCAGTGACTATGACAGCTCTTCTAGCAAAG.......................................................................................................................................................................................................................3012.002.00------------------------------------2.00-------------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTG........................................................................................................................2212.002.00-1.00--1.00---------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................GCTTACCCTTTCTTCCTAGAAG..................................................2212.002.00------------2.00-------------------------------------------------------------------------------------------------
......................................................................................................................................................................................CGGCTTACCCTTTCTTCCTAGT....................................................2212.001.00-----------------------------------2.00--------------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGAA......................................................................................................................2412.002.00----------1.00----------------------------------------------------------1.00----------------------------------------
.....................................................................................................................................................................................CCGGCTTACCCTTTCTTCCTAGA....................................................2311.001.00--------1.00-----------------------------------------------------------------------------------------------------
.................................................................................................................CTAGGAGGGAGCGGCACTGC...........................................................................................................................2011.001.00-----------1.00--------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................AGAAGGCCGGACCCAAAAACCA.................................2211.001.00---------------1.00----------------------------------------------------------------------------------------------
.....................TGACAGCTCTTCTAGCAAA........................................................................................................................................................................................................................1911.001.00----------------------------------------1.00---------------------------------------------------------------------
............................................................................................................................................AGGAGCAAAGAGAACTTAAC................................................................................................2011.001.00----------1.00---------------------------------------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGAAAT........................................................................................................................221.000.00----------------------------------------------------------------------------------1.00---------------------------
......................................................................................................................................TGGACCAGGAGCAAAGAGAACTTA..................................................................................................2411.001.00-------------------------------------------1.00------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTTT.......................................................................................................................2311.0011.00-----------------------------------------1.00--------------------------------------------------------------------
....................................................................................................................................................................................CCCGGCTTACCCTTTCTTCCTAGAA...................................................2511.001.00--------------1.00-----------------------------------------------------------------------------------------------
...........................................................................................................................................................................................TACCCTTTCTTCCTAGAAGT.................................................201.000.00----------------------------------------------------------------------------------------------------1.00---------
..................................................................................................................TAGGAGGGAGCGGCACTGAAA.........................................................................................................................211.000.00----------------------------------------------------------------------1.00---------------------------------------
.........................................................................................................................................................................................................AGAAGGCCGGACCCAAAA.....................................1811.001.00--------------------------------------1.00-----------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCA.........................................................................................................................2111.003.00------------------------------------------------------1.00-------------------------------------------------------
.................ACTATGACAGCTCTTCCCTT...........................................................................................................................................................................................................................201.000.00----------------------1.00---------------------------------------------------------------------------------------
....................................................................................................................................................................................................................CCCAAAAGGAGAAAACACC.........................191.000.00------------------------------------------------------------------------------------------------1.00-------------
...................................................................................................................................................................................TCCCGGCTTACCCTTTCTTCCTAG.....................................................2411.001.00-----------------1.00--------------------------------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGTTT.........................................................................................................................211.000.00-------1.00------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................CTTACCCTTTCTTCCTAGA....................................................1911.001.00-1.00------------------------------------------------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGTAG.....................................................................................................................2511.002.00--------------------------------------------------------------------------------------1.00-----------------------
....................................................................................................................................................................................CCCGGCTTACCCTTTCTTCCTCGAA...................................................251.000.00--------------1.00-----------------------------------------------------------------------------------------------
.........................................................................................................................................................................................CTTACCCTTTCTTCCTAGTAGT.................................................221.000.00-----------------------------------------------------------------------------------------1.00--------------------
.................................................................................................................CTAGGAGGGAGCGGCACTG............................................................................................................................1911.001.00---1.00----------------------------------------------------------------------------------------------------------
.........................................GCAAAAAGAGTGAGGAGGGGCGGGGCTGTGAGA......................................................................................................................................................................................3311.001.00-------------------------------------------1.00------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTA............................................................................................................................181.000.00-------1.00------------------------------------------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGAGTT........................................................................................................................221.000.00-------1.00------------------------------------------------------------------------------------------------------
....................ATGACAGCTCTTCTAGCAAAGGCA....................................................................................................................................................................................................................2411.001.00---------------------1.00----------------------------------------------------------------------------------------
......................GACAGCTCTTCTAGCAAAGGC.....................................................................................................................................................................................................................2111.001.00-----------------------------------------------------------------------------------1.00--------------------------
.............AGTGACTATGACAGCTCTTCT..............................................................................................................................................................................................................................2111.001.00-------------------------1.00------------------------------------------------------------------------------------
.....................TGACAGCTCTTCTAGCAAAG.......................................................................................................................................................................................................................2011.001.00-----------------1.00--------------------------------------------------------------------------------------------
................................................................................................................GCTAGGAGGGAGCGGCACT.............................................................................................................................1911.001.00---------1.00----------------------------------------------------------------------------------------------------
..........TCCAGTGACTATGACAGCTC..................................................................................................................................................................................................................................2011.001.00----------------------------------------------------------1.00---------------------------------------------------
................................................................................................................GCTAGGAGGGAGCGGGCGC.............................................................................................................................191.000.00------------------------------------------------------------------------1.00-------------------------------------
.....TCGAGTCCAGTGACTATGACAGC....................................................................................................................................................................................................................................2311.001.00------------------------1.00-------------------------------------------------------------------------------------
.........................................................................................................................................................................................CTTACCCTTTCTTCCTAGT....................................................191.000.00-------------------------1.00------------------------------------------------------------------------------------
.........GTCCAGTGACTATGACAGCTCT.................................................................................................................................................................................................................................2211.001.00-----------------1.00--------------------------------------------------------------------------------------------
.......................................................................................................................................GGACCAGGAGCAAAGAGAACTT...................................................................................................2211.001.00-------------------------1.00------------------------------------------------------------------------------------
......................................................................................................................................................................................CGGCTTACCCTTTCTTCCTAGC....................................................2211.001.00------------------------------1.00-------------------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCT..........................................................................................................................201.000.00--------------------------------------------------------------------1.00-----------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCATAA.......................................................................................................................231.000.00-------1.00------------------------------------------------------------------------------------------------------
................................................................................................................GCTAGGAGGGAGCGGCACTGCC..........................................................................................................................2211.001.00--------1.00-----------------------------------------------------------------------------------------------------
......................................................................................................................................TGGACCAGGAGCAAAGAG........................................................................................................1821.001.00----------------------------------------------------------------------------------------------------------0.500.50--
.....................................................................................................................................................................................CCGGCTTACCCTTTCTTCCTAG.....................................................2211.001.00---------------------------------------------------------------1.00----------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTAA.......................................................................................................................2311.0011.00---1.00----------------------------------------------------------------------------------------------------------
...............TGACTATGACAGCTCTTCTAGCAAAGG......................................................................................................................................................................................................................2711.001.00-----------------------------------------------------------------------------------------------------1.00--------
.....................................................................................................................................................................................CCGGCTTACCCTTTCTTCCTA......................................................2111.001.00--------------------------------------------------1.00-----------------------------------------------------------
...............................................................................................AGAAGAGGCCAACTCCCAGA.............................................................................................................................................201.000.00------------------------1.00-------------------------------------------------------------------------------------
.......................................AGGCAAAAAGAGTGAACTG......................................................................................................................................................................................................191.000.00-----------------------------------------------------------------------1.00--------------------------------------
...................................................................................................................................................................................................................................AAGCTGCCAGAGCCCGTTCCA........2111.001.00---------------------------------------------1.00----------------------------------------------------------------
......................................................................................................................................................................................CGGCTTACCCTTTCTTCCTAG.....................................................2111.001.00-----------------1.00--------------------------------------------------------------------------------------------
..................................................................................................................TAGGAGGGAGCGGCACTGCCTGGAAT....................................................................................................................2611.0012.00-----------1.00--------------------------------------------------------------------------------------------------
....................................................................................................................................................................................CCCGGCTTACCCTTTCTTCCTAGAAC..................................................2611.001.00---------------------------------------------------------------------------------1.00----------------------------
............................................................................................................................................................................................ACCCTTTCTTCCTAGA....................................................1660.500.50--0.50-----------------------------------------------------------------------------------------------------------
..............................................................................GGCAAGGAGTCAGAGGGA................................................................................................................................................................1830.330.33--------------0.33-----------------------------------------------------------------------------------------------
.....................................................................................................................................CTGGACCAGGAGCAAA...........................................................................................................1630.330.33------------------------------------------------------------------------------------------------------------0.33-
........................................................................................................................................................................TTGTCTCTGCCTCCCGG.......................................................................1740.250.25-------------------------------------------------------------------------------------------------------------0.25
.....................................................................................................................................................................................................................CCAAAAGGAGAAAAAAG..........................1780.120.12------0.12-------------------------------------------------------------------------------------------------------

Antisense strand
ACAGATCGAGTCCAGTGACTATGACAGCTCTTCTAGCAAAGGCAAAAAGAGTGAGGAGGGGCGGGGCTGTGAGATGCGGGCAAGGAGTCAGAGGGAGAAGAGGCCAACTCCAGCTAGGAGGGAGCGGCACTGCCTGGACCAGGAGCAAAGAGAACTTAACCCATCTTTTTGTCTCTGCCTCCCGGCTTACCCTTTCTTCCTAGAAGGCCGGACCCAAAAGGAGAAAAAAGCTGCCAGAGCCCGTTCCAAAGGGAAA
.................................................................................................................(((((((((((.((....(((.(((.(((..(((((((((..........)))))))))..)))..))).)))...)).))))))))))).....................................................
.............................................................................................................110.............................................................................................206................................................
SizePerfect hitTotal NormPerfect NormSRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR023847(GSM307156)
mESv6.5smallrna_rep1. (cell line)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR073954(GSM629280)
total RNA. (blood)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR206940(GSM723281)
other. (brain)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR073955(GSM629281)
total RNA. (blood)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR059771(GSM562833)
CD4_control. (spleen)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR206939(GSM723280)
other. (brain)		GSM475279(GSM475279)
Miwi-IP. (miwi testes)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		mjTestesWT3()
Testes Data. (testes)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR553585(SRX182791)
source: Kidney. (Kidney)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)
...........................................................................................................................................................................TCTCTGCCTCCCGGCTAA................................................................... 185.000.00--5.00-----------------------------------------------------------------------------------------------------------
..........................................................................................................................................................CTTAACCCATCTTTTAGGG................................................................................... 192.000.00------------------------------------------------------------------------------------1.00---1.00---------------------
.....................................................................................................................................................................................................................................GCTGCCAGAGCCCGTTCCAAAGGGAA. 2611.001.00----------------------------------------------------------------------------------------------1.00---------------
...........CCAGTGACTATGACAGCTCTTCTAGCAAA........................................................................................................................................................................................................................ 2911.001.00---------------------------------------------------------------------------------------1.00----------------------
.............AGTGACTATGACAGCTCTTCTAGCA.......................................................................................................................................................................................................................... 2511.001.00-------------------------------------------------------------------------------------------------1.00------------
....................................................................................................................GGAGGGAGCGGCACTCAA.......................................................................................................................... 181.000.00------------------1.00-------------------------------------------------------------------------------------------
..................................................................................................AGAGGCCAACTCCAGCGAAG.......................................................................................................................................... 201.000.00------------------------------------------------------------1.00-------------------------------------------------
........................................................................................................................................................................................................................................GCCAGAGCCCGTTCCGC....... 171.000.00-------------------------------------------------1.00------------------------------------------------------------
.........................................................................................................................................................................................................................................CCAGAGCCCGTTCCA........ 1590.220.22--0.22-----------------------------------------------------------------------------------------------------------