ID: uc009cnj.5
GENE: Ikbkb(5)
chr6:83326919-83327168-


(2)
AGO1.ip 		(13)
AGO2.ip 		(2)
AGO3.ip 		(4)
B-CELL 		(27)
BRAIN 		(1)
CELL-LINE 		(1)
DCR.mut 		(2)
DGCR8.mut 		(10)
EMBRYO 		(4)
ESC 		(5)
FIBROBLAST 		(1)
HEART 		(4)
LIVER 		(3)
LYMPH 		(11)
OTHER 		(1)
OTHER.ip 		(4)
OTHER.mut 		(1)
OVARY 		(4)
PIWI.ip 		(2)
PIWI.mut 		(5)
SKIN 		(7)
SPLEEN 		(15)
TESTES 		(2)
THYMUS 		(2)
TOTAL-RNA

Sense strand
TTTTAAGTCTGTGTTGGTCACAAATGTCTTAGACTTCATTGTCACTACTTTTTATTTTGCTGTTTTAAAATGTGTTTCTTCTTCCCTAATGGTGCTGTCCTAAAGATGGACAGCTACAGGTCTGTGGGATAGTGAGGGGCATGTACCATGCAGAGCTGTGTGGCCCTGCAGGGCAGTGGCTCAGTCCCATGTCTCTGCAGGTGATCCGAAGACACACACTGGAGGAGAAGCTGCTGTGCCTGGTGCGGCA
....................................................................................................................................................(((((((.(((((((((((((...)))).))).))....)))).)))))))...................................................
.............................................................................................................................................142.......................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		mjTestesWT3()
Testes Data. (testes)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR525238(SRA056111/SRX170314)
Second IgG control. (Blood)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR553582(SRX182788)
source: Brain. (Brain)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR206942(GSM723283)
other. (brain)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR073954(GSM629280)
total RNA. (blood)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR065048(SRR065048)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR037898(GSM510434)
ovary_rep3. (ovary)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		mjLiverWT3()
Liver Data. (liver)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		mjTestesWT2()
Testes Data. (testes)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR206940(GSM723281)
other. (brain)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR073955(GSM629281)
total RNA. (blood)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR390298(GSM849856)
cell line: NIH-3T3cell type: fibroblastinfect. (fibroblast)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR206941(GSM723282)
other. (brain)		SRR060845(GSM561991)
total RNA. (brain)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGA.................................................21149.0023.001.007.006.002.00-5.00-4.003.00-3.004.00-------2.00-2.00--------------------1.001.00---1.00--------1.00------------------1.001.001.00------1.00--1.00-----------1.00--
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGT.................................................21140.0023.0012.00--1.002.00--1.001.00--1.00--3.002.002.002.002.00-----1.00-------------1.00------2.00--1.00------1.00-------1.00---------1.00------1.00---------1.00----1.00------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGAA................................................22132.0023.0012.003.003.002.00-----1.00---4.00--------1.00-1.00---------------------------------1.00-1.00--------------------1.001.00--------1.00----------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAG..................................................20123.0023.00-1.001.001.00-3.00-------2.00-1.00--------1.001.00--1.00----2.00--2.00----2.00-1.00----------1.00--1.00------1.00--------------------------------1.00----
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGTT................................................22117.0023.00--3.001.003.00---1.00-1.00-----3.00-2.00---1.00------------1.00-----------------------1.00------------------------------------------
..................................................................................................................................................CATGCAGAGCTGTGTGGCCCTGC.................................................................................23112.0012.00------10.00--------------------------------1.00-------------------------------------------------1.00------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGAAA...............................................23110.0023.00-4.00-4.00---------------------------------------------1.00-1.00--------------------------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGAT................................................2218.0023.00----2.00----3.00---------1.00--------1.00-----------------------1.00-------------------------------------------------
...................................................................................................................................................ATGCAGAGCTGTGTGGCCCTGAAT...............................................................................2416.002.006.00-----------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................TCCGAAGACACACACTGGAGGAGAAGCTG.................2915.005.00---------------------------2.00----1.00-2.00-------------------------------------------------------------------
.....................................................................................................AAAGATGGACAGCTACAGGT.................................................................................................................................2014.004.00--------------------4.00---------------------------------------------------------------------------------
...................................................................................................................................................................................................................ACACACACTGGAGGACCGA....................193.000.00------------1.00----2.00------------------------------------------------------------------------------------
...................................................................................................................................................................................................................ACACACACTGGAGGACCG.....................183.000.00-----------------1.00-------------2.00----------------------------------------------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGTTAA..............................................2413.0023.00--------------3.00---------------------------------------------------------------------------------------
.................................................................................................................................................................................................................AGACACACACTGGAGGAGAAGCTGCTG..............2713.003.00--------------------------------1.00-----------------------------1.00---------------1.00-----------------------
.........................................................................................................................................................................................CCCATGTCTCTGCAGGTG...............................................1812.002.00---------2.00--------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGTAT...............................................2312.0023.00----2.00-------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGTAG...............................................2312.0023.00-----------------------------------------------------------------1.00-1.00----------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGAAT...............................................2312.0023.00-2.00----------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCA...................................................1912.002.00---------------2.00--------------------------------------------------------------------------------------
..................................................................................................................................................CATGCAGAGCTGTGTGGCCCTG..................................................................................2212.002.00-------------------------------------2.00----------------------------------------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGTAA...............................................2312.0023.00------------1.00--------------------------1.00--------------------------------------------------------------
...................................................................................................................................................ATGCAGAGCTGTGTGGCCCTG..................................................................................2112.002.00----1.00----------1.00--------------------------------------------------------------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGC.................................................2112.0023.00-----2.00------------------------------------------------------------------------------------------------
......................................................................................................................................................................................AGTCCCATGTCTCTGCAGA.................................................192.000.00----------------------------------------------1.00-------------------1.00-----------------------------------
..............................................................................................................................................................................................................CGAAGACACACACTGGAGGAGAAGCT..................2612.002.00-----------------------1.00--1.00---------------------------------------------------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCCGTA................................................221.000.00----------1.00-------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGAAGT..............................................2411.0023.00--------------------------------------------------------------------------1.00---------------------------
........................................................................................................................................................................................................................CACTGGAGGAGAAGCTGC................1811.001.00--------------------------------------------------1.00---------------------------------------------------
..................................................................................................................................................CATGCAGAGCTGTGTGGCCCT...................................................................................2111.001.00------------------------------1.00-----------------------------------------------------------------------
........................................................................................................................................................................................................................CACTGGAGGAGAAGCTGCT...............1911.001.00------------------------------------------------------------------------1.00-----------------------------
..........................................................................................................................................................................................................................CTGGAGGAGAAGCTGCTGTGCCTGGTGCGGCAATC351.000.00-------------------------1.00----------------------------------------------------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGAGT...............................................2311.0023.00-----1.00------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGTAAA..............................................2411.0023.00--------------------------------------------1.00---------------------------------------------------------
................................................................................................................................................................................................................AAGACACACACTGGAGGAGAAGCTGC................2611.001.00---------------------------1.00--------------------------------------------------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCATAA................................................2211.002.00-1.00----------------------------------------------------------------------------------------------------
...................................................................................................................................................ATGCAGAGCTGTGTGAATT....................................................................................191.000.00----------------------------------------------------------------------------------------------------1.00-
.....................................................................................................................................................................................................................ACACACTGGAGGAGAAGCTGCTGTGCTT.........281.000.00--------------------------1.00---------------------------------------------------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGTG................................................2211.0023.00-------1.00----------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGATT...............................................2311.0023.00-----------1.00------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................CGAAGACACACACTGGAGGAGAAGCTGC................2811.001.00-----------------------1.00------------------------------------------------------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCATTT................................................2211.002.00-------------------1.00----------------------------------------------------------------------------------
...................................................................................................................................................ATGCAGAGCTGTGTGGCCCTGC.................................................................................2211.001.00-------------------------------------------------------------------------------------1.00----------------
.......................................................................................................................................................................................................................ACACTGGAGGAGAAGCTC.................181.000.00----------------------------------------------------------------------1.00-------------------------------
..................................................................................................................................................................................................................GACACACACTGGAGGAGAAGCTGCTG..............2611.001.00-------------------------------------------------------------------------------1.00----------------------
...................................................................................................................................................ATGCAGAGCTGTGTGGCCC....................................................................................1911.001.00------------1.00-----------------------------------------------------------------------------------------
................................................................................................................................................................................................................AAGACACACACTGGAGGAGAAGCTGCT...............2711.001.00-----------------------1.00------------------------------------------------------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAAT.................................................2111.002.00--------1.00---------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................CACTGGAGGAGAAGCTGCTGT.............2111.001.00----------------------------------------1.00-------------------------------------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGTC................................................2211.0023.00----------1.00-------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................ACACACACTGGAGGAGAAGCTGC................2311.001.00--1.00---------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................CACACACTGGAGGAGGTTT...................191.000.00---------------------------------------------------------------------1.00--------------------------------
...................................................................................................................................................ATGCAGAGCTGTGTGGCCCTGCA................................................................................2311.001.00---------------------1.00--------------------------------------------------------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAA..................................................2011.002.00-----------------------------------------------------------------------------------1.00------------------
...................................................................................................CTAAAGATGGACAGCTACA....................................................................................................................................1911.001.00----------------------------------------------------------------------------------------1.00-------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGG.................................................2111.001.00--1.00---------------------------------------------------------------------------------------------------
..................................................................AAAATGTGTTTCTTCTTCCCT...................................................................................................................................................................2111.001.00---1.00--------------------------------------------------------------------------------------------------
...................................................................................................................................................ATGCAGAGCTGTGTGGCCCTGAA................................................................................2311.002.00------------1.00-----------------------------------------------------------------------------------------
....................................................................................................................................................................CCTGCAGGGCAGTGGCTCAGTC................................................................2211.001.00--------------------------------------------------------------------------------------------------1.00---
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGTTT...............................................2311.0023.00----------------------------------------------1.00-------------------------------------------------------
..................................................................................................................................................................................................................GACACACACTGGAGGAGAAGCTGC................2411.001.00-----------------------------1.00------------------------------------------------------------------------
......................................................................................................................................................................................................................CACACTGGAGGAGAACGA..................181.000.00----------------------------------------------------------------------------------------------1.00-------
.......................................................................................................................................................................................................................ACACTGGAGGAGAAGCTGCT...............2011.001.00-----------------------------------1.00------------------------------------------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGTA................................................2211.0023.00-------1.00----------------------------------------------------------------------------------------------
.......................................................................................................................................................................................GTCCCATGTCTCTGCAGC.................................................181.000.00--------1.00---------------------------------------------------------------------------------------------
...................................................................................................................................................ATGCAGAGCTGTGTGGCCCTGTAT...............................................................................2411.002.00----1.00-------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................TCCGAAGACACACACTGGAGGAGAAGC...................2711.001.00--------------------------------------------------------------------------------------1.00---------------
...................................................................................................................ACAGGTCTGTGGGATAGT.....................................................................................................................1811.001.00-1.00----------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................TGGAGGAGAAGCTGCTGTGCCTGGTGC....2711.001.00--------------------------1.00---------------------------------------------------------------------------
..................................................................................................................................................CATGCAGAGCTGTGTGGCCCTGAAT...............................................................................2511.002.00----------------------------1.00-------------------------------------------------------------------------
...................................................................................................................................................ATGCAGAGCTGTGTGGCCCTAT.................................................................................221.000.00--------------------------------------------------------------------1.00---------------------------------
...................................................................................................................................................ATGCAGAGCTGTGTGGCCCTGT.................................................................................2211.002.00----1.00-------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGTTA...............................................2311.0023.00-1.00----------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................ACACACTGGAGGAGAAGCTGCT...............2211.001.00----------------------------------------1.00-------------------------------------------------------------
......................................................................................................................................AGGGGCATGTACCATGCAGA................................................................................................2011.001.00--------------------------------------1.00---------------------------------------------------------------
.....................................................................................................................................................................................................................................GCTGCTGTGCCTGGTGCGGCA2111.001.00--1.00---------------------------------------------------------------------------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGAAG...............................................2311.0023.00--1.00---------------------------------------------------------------------------------------------------
..................................................................................................................................................................................GCTCAGTCCCATGTCTCTGCAG..................................................2211.001.00-----------------------------------------------------------------------1.00------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGACA...............................................2311.0023.00--------------------------------------------1.00---------------------------------------------------------
.................................................................................................................................................................................................................................AGAAGCTGCTGTGCCTGGGTAC...221.000.00---------------------------------------------------------------------------------------------1.00--------
..........................................................................................................................................................................................................................CTGGAGGAGAAGCTGCTAT.............191.000.00-----------------------------1.00------------------------------------------------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGACT...............................................2311.0023.00-------1.00----------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................ACTGGAGGAGAAGCTGCT...............1821.001.00-1.00----------------------------------------------------------------------------------------------------
...............................................................................................................................................TACCATGCAGAGCTGTGT.........................................................................................1811.001.00------------1.00-----------------------------------------------------------------------------------------
.....................................................................................................................................................................CTGCAGGGCAGTGGCTCAGTCC...............................................................2211.001.00------------------------------------------1.00-----------------------------------------------------------
...................................................................................................................................................................................................................ACACACACTGGAGGAGGCA....................191.000.00--------------------------------------------------------------------------------------------1.00---------
...........................................................................................................................................................................................................................TGGAGGAGAAGCTGCTGTGCCTGGCG.....261.000.00------------------------------------------------------------------------------------------------1.00-----
.....................................................................................................................................................................................CAGTCCCATGTCTCTGCAGT.................................................201.000.00-------1.00----------------------------------------------------------------------------------------------
...................................................................................................................................................ATGCAGAGCTGTGTGGCCCTGA.................................................................................2211.002.00----------------------1.00-------------------------------------------------------------------------------
....................................................................................................................................................................................TCAGTCCCATGTCTCTGCAGTTAG..............................................2411.0023.00---1.00--------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................CTGGAGGAGAAGCTGCTG..............1830.670.67-----------------------------0.67------------------------------------------------------------------------
....................................................................................................................................................TGCAGAGCTGTGTGGCC.....................................................................................1740.250.25------------------------------0.25-----------------------------------------------------------------------

Antisense strand
TTTTAAGTCTGTGTTGGTCACAAATGTCTTAGACTTCATTGTCACTACTTTTTATTTTGCTGTTTTAAAATGTGTTTCTTCTTCCCTAATGGTGCTGTCCTAAAGATGGACAGCTACAGGTCTGTGGGATAGTGAGGGGCATGTACCATGCAGAGCTGTGTGGCCCTGCAGGGCAGTGGCTCAGTCCCATGTCTCTGCAGGTGATCCGAAGACACACACTGGAGGAGAAGCTGCTGTGCCTGGTGCGGCA
....................................................................................................................................................(((((((.(((((((((((((...)))).))).))....)))).)))))))...................................................
.............................................................................................................................................142.......................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		mjTestesWT3()
Testes Data. (testes)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR525238(SRA056111/SRX170314)
Second IgG control. (Blood)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR553582(SRX182788)
source: Brain. (Brain)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR206942(GSM723283)
other. (brain)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR073954(GSM629280)
total RNA. (blood)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR065048(SRR065048)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR037898(GSM510434)
ovary_rep3. (ovary)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		mjLiverWT3()
Liver Data. (liver)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		mjTestesWT2()
Testes Data. (testes)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR206940(GSM723281)
other. (brain)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR073955(GSM629281)
total RNA. (blood)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR390298(GSM849856)
cell line: NIH-3T3cell type: fibroblastinfect. (fibroblast)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR206941(GSM723282)
other. (brain)		SRR060845(GSM561991)
total RNA. (brain)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
............................................................................................................................................................................GCAGTGGCTCAGTCCCTGCC.......................................................... 201.000.00-------------------------------------------------------------1.00----------------------------------------
............................................................................................................................................................................GCAGTGGCTCAGTCCCGC............................................................ 181.000.00------------------------------1.00-----------------------------------------------------------------------
....................................................................AATGTGTTTCTTCTTCGAA................................................................................................................................................................... 191.000.00------------1.00-----------------------------------------------------------------------------------------
...............................................................................................................................................................................GTGGCTCAGTCCCATGGCC........................................................ 191.000.00-----------------------------------------------------1.00------------------------------------------------
.................................................................................................................................................................................................................................AGAAGCTGCTGTGCCTGATG..... 201.000.00-----------------------------------------------------------------------------------------------------1.00
.............................................................................CTTCTTCCCTAATGGTAGA.......................................................................................................................................................... 191.000.00-------------------------1.00----------------------------------------------------------------------------