ID: uc009aiz.8
GENE: Slc29a4(8)
chr5:143195710-143195959+


(1)
AGO2.ip 		(1)
B-CELL 		(21)
BRAIN 		(1)
DCR.mut 		(1)
DGCR8.mut 		(5)
EMBRYO 		(1)
ESC 		(1)
LIVER 		(5)
OTHER 		(1)
PIWI.mut 		(1)
SPLEEN 		(4)
TESTES

Sense strand
AGTGTTTGTCTAGCATATTCCAGGTTTCACCTTCTATCACCAGTACTGTAAAGGGGGCAGGTTATGAGATGGTGCGGCTCTTGTAAGGTAAGCTGGACCCAGTCAAGGTTGTCAGGCACAGGGTGTAACTGGAGGGCCTGGCTGGCAGAGAGACGGGCTTATGGCTAGGTGGGTAATCCCAGACTCCCTGCTCTCTGCAGATCCTGGCAGCCCTGCCCGTGGAGTGGCGGGGCACTCACCTGCTCGCCTG
................................................................................................................................................((((((((..(((.........((.((((....))))..)))))..))))))))....................................................
.........................................................................................................................................138...........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		mjTestesWT3()
Testes Data. (testes)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		mjLiverWT3()
Liver Data. (liver)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR073955(GSM629281)
total RNA. (blood)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR206941(GSM723282)
other. (brain)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR037907(GSM510443)
brain_rep4. (brain)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		SRR073954(GSM629280)
total RNA. (blood)
....................................................................................................................................................................................AGACTCCCTGCTCTCTGCAGT.................................................21132.002.007.0010.002.004.003.00-1.00---1.002.00------2.00--------------------
...................................................................................................................................................................................CAGACTCCCTGCTCTCTGCAGT.................................................22128.001.007.002.007.002.00-1.001.003.00-----3.00-----1.00-------------1.00-----
....................................................................................................................................................................................AGACTCCCTGCTCTCTGCAGTT................................................22123.002.008.001.001.00-1.003.002.00-3.00------1.00------1.00--1.00---1.00---------
...................................................................................................................................................................................CAGACTCCCTGCTCTCTGCAGA.................................................2219.009.00-2.00-4.00------1.00-----------1.00------------1.00---
....................................................................................................................................................................................AGACTCCCTGCTCTCTGCAGAA................................................2216.006.00--------1.00---3.00---2.00----------------------
....................................................................................................................................................................................AGACTCCCTGCTCTCTGCAGA.................................................2116.006.00-1.002.001.00--1.00--------------1.00-----------------
....................................................................................................................................................................................AGACTCCCTGCTCTCTGCAGTA................................................2213.002.001.00-1.00--1.00---------------------------------
....................................................................................................................................................................................AGACTCCCTGCTCTCTGCAGTTT...............................................2313.002.002.00------------------1.00-------------------
............................................................................................................................................................................................TGCTCTCTGCAGATCCTGGCAG........................................2212.002.00---------2.00-----------------------------
...................................................................................................................................................................................CAGACTCCCTGCTCTCTGCAGTT................................................2312.001.001.001.00-------------------------------------
..............................................................................................................................................TGGCAGAGAGACGGGCTTATGG......................................................................................2212.002.00-----------1.00---1.00-----------------------
...................................................................................................................................................................................CAGACTCCCTGCTCTCTGCATC.................................................2212.001.00-1.001.00------------------------------------
....................................................................................................................................................................................AGACTCCCTGCTCTCTGCAG..................................................2012.002.00-2.00-------------------------------------
....................................................................................................................................................................................AGACTCCCTGCTCTCTGCAA..................................................202.000.00------------------------------1.00-----1.00--
...............................................................................................................................................GGCAGAGAGACGGGCTTATGGA.....................................................................................222.000.00--1.00--------------------1.00---------------
...............................................................................................................................................GGCAGAGAGACGGGCTTATGGC.....................................................................................2212.002.00--1.00-----------------------------1.00------
...................................................................................................................................................................................CAGACTCCCTGCTCTCTGCAGAT................................................2312.002.00-----------------2.00---------------------
....................................................................................................................................................................................AGACTCCCTGCTCTCTGCAT..................................................201.000.00--1.00------------------------------------
...................................................................................................................................................................................CAGACTCCCTGCTCTCTGCAGTA................................................2311.001.00----------------------------1.00----------
..................................................AAGGGGGCAGGTTATGAACT....................................................................................................................................................................................201.000.00--------------1.00------------------------
............................................................................................................................................GCTGGCAGAGAGACGCT.............................................................................................171.000.00--------------1.00------------------------
.............................................................................................................................................CTGGCAGAGAGACGGGCTTATGG......................................................................................2311.001.00---1.00-----------------------------------
....................................................................................................................................................................................AGACTCCCTGCTCTCTGCAGTAA...............................................2311.002.00----1.00----------------------------------
..............................................................................................................................................TGGCAGAGAGACGGGCTTATGGT.....................................................................................2311.002.00----------1.00----------------------------
...................................................................................................................................................................................CAGACTCCCTGCTCTCTGCAG..................................................2111.001.001.00--------------------------------------
.....................................................................................................................................................................................GACTCCCTGCTCTCTGCAGT.................................................201.000.00-------------------------------------1.00-
....................................................................................................................................................................................AGACTCCCTGCTCTCTGCATA.................................................211.000.00---------1.00-----------------------------
...................................................................................................................................................................................CAGACTCCCTGCTCTCTGC....................................................1911.001.00----------------------------------1.00----
..............................................................TATGAGATGGTGCGGCTCTTGTAA....................................................................................................................................................................2411.001.00---------------------------1.00-----------
....................................................................................................................................................................................AGACTCCCTGCTCTCTGCAGTTA...............................................2311.002.001.00--------------------------------------
....................................................................................................................................................................................AGACTCCCTGCTCTCTGCAGAT................................................2211.001.00---1.00-----------------------------------
........................................................................................................AAGGTTGTCAGGCACCGT................................................................................................................................181.000.00------------------------1.00--------------
......................................................................................................TCAAGGTTGTCAGGCACAGGGTGT............................................................................................................................2411.001.00--------------------------1.00------------
...................................................................................................................................................................................CAGACTCCCTGCTCTCTGCAGAA................................................2311.009.001.00--------------------------------------
....................................................................................................................................................................................AGACTCCCTGCTCTCTGCAATA................................................221.000.00--1.00------------------------------------
....................................................................................................................................................................................AGACTCCCTGCTCTCTGTAGA.................................................211.000.00---------------------1.00-----------------
.............................................................................................................................................................................................GCTCTCTGCAGATCCGT............................................171.000.00--------------------------------------1.00
..............................................................................................................................................TGGCAGAGAGACGGGCTGTT........................................................................................201.000.00-------------------------------1.00-------
...................................................................................................................................................................................CAGACTCCCTGCTCTCTGCA...................................................2011.001.001.00--------------------------------------
.....................................................................................................................................................................................GACTCCCTGCTCTCTGCAGTAA...............................................221.000.00-------1.00-------------------------------
....................................................................................................................................AGGGCCTGGCTGGCAG......................................................................................................1670.140.14--------------0.14------------------------

Antisense strand
AGTGTTTGTCTAGCATATTCCAGGTTTCACCTTCTATCACCAGTACTGTAAAGGGGGCAGGTTATGAGATGGTGCGGCTCTTGTAAGGTAAGCTGGACCCAGTCAAGGTTGTCAGGCACAGGGTGTAACTGGAGGGCCTGGCTGGCAGAGAGACGGGCTTATGGCTAGGTGGGTAATCCCAGACTCCCTGCTCTCTGCAGATCCTGGCAGCCCTGCCCGTGGAGTGGCGGGGCACTCACCTGCTCGCCTG
................................................................................................................................................((((((((..(((.........((.((((....))))..)))))..))))))))....................................................
.........................................................................................................................................138...........................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		mjTestesWT3()
Testes Data. (testes)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		mjLiverWT3()
Liver Data. (liver)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR073955(GSM629281)
total RNA. (blood)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR206941(GSM723282)
other. (brain)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR037907(GSM510443)
brain_rep4. (brain)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		SRR073954(GSM629280)
total RNA. (blood)
.............................................................................................TGGACCCAGTCAAGGTAA........................................................................................................................................... 181.000.00--------------------1.00------------------
........................................CAGTACTGTAAAGGGGA................................................................................................................................................................................................. 171.000.00--------------------1.00------------------