ID: uc008xct.7
GENE: Mfsd10(5)
chr5:34978131-34978307-


(1)
AGO1.ip
(4)
AGO2.ip
(2)
AGO3.ip
(11)
BRAIN
(3)
CELL-LINE
(1)
DGCR8.mut
(5)
EMBRYO
(9)
ESC
(5)
FIBROBLAST
(1)
KIDNEY
(3)
LIVER
(1)
LYMPH
(8)
OTHER
(8)
OTHER.mut
(1)
PIWI.mut
(4)
SKIN
(4)
SPLEEN
(17)
TESTES
(2)
TOTAL-RNA
(1)
UTERUS

Sense strand
CAGCCATTGTCGCTGACCTGGGCTCACCTCCAACCCGCAGCCAAGGCATGGTGAGTGAACAGACCTAGGGAACGGGGATTGATGTCTGGGCTTCAGACTCCATGCCTAGCTCAGGTCTTTTCCCTAGGCAGTCATCGGGGTAGCCTTCTCCTTGGCCTTTACTCTGGGTCCCATGCT
.................................................................(((((((.(((..((((...((((((............)))))).)))).))).)))))))...................................................
.................................................................66...........................................................127................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
mjTestesWT1()
Testes Data. (testes)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
mjLiverWT1()
Liver Data. (liver)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
mjTestesWT2()
Testes Data. (testes)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR206942(GSM723283)
other. (brain)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR553585(SRX182791)
source: Kidney. (Kidney)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
GSM510455(GSM510455)
newborn_rep11. (total RNA)
SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
......................................................................AACGGGGATTGATGTCTGGGCT.....................................................................................22120.0020.004.003.001.00-2.00------1.00--1.00---2.00----1.00-1.00-------1.00---1.00---1.00--1.00-----------------------------
......................................................................AACGGGGATTGATGTCTGGGCTTT...................................................................................24119.0014.009.002.002.00--1.00--------1.00--1.00-----1.00------------------1.00-----------------------------1.00-
......................................................................AACGGGGATTGATGTCTGGGCTT....................................................................................23114.0014.001.00-3.00--1.00----------1.00----1.00------1.00----1.001.00-----------1.00-----1.00-------1.00--------1.00----
..........................................................................................................TAGCTCAGGTCTTTTCCCTAGT.................................................22111.002.00---8.00--------------------------------2.00----------------------------------1.00--
......................................................................AACGGGGATTGATGTCTGGGCTTC...................................................................................2419.009.004.001.00---2.00-------------------------------1.00-------------------------1.00----------
......................................................................AACGGGGATTGATGTCTGGGCTTCAGT................................................................................2719.008.001.001.00-----6.00------------------------------------------------------1.00-----------
......................................................................AACGGGGATTGATGTCTGGGC......................................................................................2118.008.003.00---2.00----------------1.00---1.00---------1.00--------------------------------------
......................................................................AACGGGGATTGATGTCTGGGCTTCAG.................................................................................2618.008.003.00-----3.00-------------------------1.00-----------------------1.00-----------------
.......................................................................ACGGGGATTGATGTCTGGGCTTC...................................................................................2317.007.003.00------------2.00-------------1.00------------------------------1.00---------------
......................................................................AACGGGGATTGATGTCTGGGCTTTT..................................................................................2517.0014.002.002.001.00--1.00------------------1.00-------------------------------------------------
......................................................................AACGGGGATTGATGTCTGGGCTTTAA.................................................................................2616.0014.00------6.00-------------------------------------------------------------------
..................................................GTGAGTGAACAGACCTAGGGAACGGGG....................................................................................................2716.006.00----------2.00---------1.00-2.00--------------------------1.00------------------------
......................................................................AACGGGGATTGATGTCTGG........................................................................................1916.006.00---1.00------------1.001.00------1.00--1.00----1.00-----------------------------------------
......................................................................AACGGGGATTGATGTCTGGGCTTCATA................................................................................2715.003.00---------5.00----------------------------------------------------------------
......................................................................AACGGGGATTGATGTCTGGGCTA....................................................................................2315.0020.00--------2.00-------1.00--1.00---------------1.00--------------------------------------
.............................................................................................................CTCAGGTCTTTTCCCTAGGCAG..............................................2215.005.00---1.00------------------------------1.00---------------1.00-------------1.001.00--------
......................................................................AACGGGGATTGATGTCTGGGCTAT...................................................................................2415.0020.002.00-1.00--1.00-----------------------1.00--------------------------------------------
.................................................................TAGGGAACGGGGATTGATGTCTGGG.......................................................................................2515.005.00----5.00---------------------------------------------------------------------
......................................................................AACGGGGATTGATGTCTGGG.......................................................................................2015.005.00--1.00-----1.00--2.00-----------1.00--------------------------------------------------
......................................................................AACGGGGATTGATGTCTGGGCTAAT..................................................................................2515.0020.002.00------------3.00------------------------------------------------------------
.AGCCATTGTCGCTGACCTGGGCTC........................................................................................................................................................2414.004.00---------------4.00----------------------------------------------------------
......................................................................AACGGGGATTGATGTCTGGGCAA....................................................................................2313.008.00-1.00----------2.00-------------------------------------------------------------
..................................................GTGAGTGAACAGACCTAGGGAACGGGGA...................................................................................................2813.003.00--------------------1.00----------------------------------------1.00----1.00-------
......................................................................AACGGGGATTGATGTCTGGGCTTCA..................................................................................2513.003.001.00-----------2.00-------------------------------------------------------------
..........................................................................................................TAGCTCAGGTCTTTTCCCTAGA.................................................2213.002.001.001.00-----------------------1.00------------------------------------------------
......................................................................AACGGGGATTGATGTCTGGGCTAA...................................................................................2412.0020.001.00------------------1.00------------------------------------------------------
....................................................GAGTGAACAGACCTAGGGAACGG......................................................................................................2312.002.00----------------------1.00-----1.00---------------------------------------------
...............................................................................................................................GCAGTCATCGGGGTAGCCTTCTCCTT........................2612.002.00-------------------------------2.00------------------------------------------
......................................................................AACGGGGATTGATGTCTGGGCTTCAGA................................................................................2712.002.001.00---------------1.00---------------------------------------------------------
.......................................................................ACGGGGATTGATGTCTGGGCTTCAG.................................................................................2512.002.002.00-------------------------------------------------------------------------
......................................................................AACGGGGATTGATGTCTGGGCTTAT..................................................................................2512.0014.00--1.00-----------1.00-----------------------------------------------------------
..................................................GTGAGTGAACAGACCTAGGGA..........................................................................................................2112.002.00--------------------------2.00-----------------------------------------------
..........................................................................................................TAGCTCAGGTCTTTTCCCTAG..................................................2112.002.001.00-----------------------------------------------------1.00-------------------
......................................................................AACGGGGATTGATGTCTGGGCTTCT..................................................................................2512.009.00--1.00--------1.00--------------------------------------------------------------
............................................................................................................GCTCAGGTCTTTTCCCTAGAAA...............................................221.000.00--------------------------------------1.00-----------------------------------
......................................................................AACGGGGATTGATGTCTGGGT......................................................................................2111.005.00-----------------------------------------------------------1.00--------------
............................TCCAACCCGCAGCCAAGGCA.................................................................................................................................2011.001.00--------1.00-----------------------------------------------------------------
.....................................................................GAACGGGGATTGATGTCTGGGCTATT..................................................................................261.000.00-1.00------------------------------------------------------------------------
......................................................................AACGGGGATTGATGTCTGGGCTTTAG.................................................................................2611.0014.001.00-------------------------------------------------------------------------
......................................................................AACGGGGATTGATGTCTGGGCTTGT..................................................................................2511.0014.00-----------------1.00--------------------------------------------------------
......................................................................AACGGGGATTGATGTCTGGT.......................................................................................2011.006.00------------1.00-------------------------------------------------------------
...CCATTGTCGCTGACCTGGGC..........................................................................................................................................................2011.001.00----------------------------------------------------------------------1.00---
.....ATTGTCGCTGACCTGGGCTCACCTC...................................................................................................................................................2511.001.00--------------------------------------------------------------------1.00-----
.....................................................................GAACGGGGATTGATGTCTGGGCTA....................................................................................241.000.001.00-------------------------------------------------------------------------
......................................................................AACGGGGATTGATGTCTGGGCTTTG..................................................................................2511.0014.001.00-------------------------------------------------------------------------
..........................................................................GGGATTGATGTCTGGGCTTCAGA................................................................................2311.001.00-----------1.00--------------------------------------------------------------
..........................................................................GGGATTGATGTCTGGGCTAAT..................................................................................2111.001.001.00-------------------------------------------------------------------------
...............................................ATGGTGAGTGAACAGGGAA...............................................................................................................191.000.00---------------------------------------------1.00----------------------------
.......................................................................ACGGGGATTGATGTCTGGGCTAT...................................................................................231.000.00-------------------1.00------------------------------------------------------
..........................................................................GGGATTGATGTCTGGGCTTCAG.................................................................................2211.001.00----------1.00---------------------------------------------------------------
......TTGTCGCTGACCTGGGCTCACCTCCA.................................................................................................................................................2611.001.00---------------------------------------1.00----------------------------------
.................................................................TAGGGAACGGGGATTGATGT............................................................................................2011.001.001.00-------------------------------------------------------------------------
.......................................................TGAACAGACCTAGGGAACG.......................................................................................................1911.001.00-----------------1.00--------------------------------------------------------
......................................................................AACGGGGATTGATGTCTGGGCTTTA..................................................................................2511.0014.001.00-------------------------------------------------------------------------
....................................................GAGTGAACAGACCTAGGGA..........................................................................................................1911.001.00------------------1.00-------------------------------------------------------
.........................................................................GGGGATTGATGTCTGGGCTTC...................................................................................2111.001.00----------1.00---------------------------------------------------------------
......................................................................AACGGGGATTGATGTCTGGGCTTA...................................................................................2411.0014.001.00-------------------------------------------------------------------------
...................................................TGAGTGAACAGACCTAGGGAACGGGGA...................................................................................................2711.001.00--------------1.00-----------------------------------------------------------
...........................................................CAGACCTAGGGAACGGGGATTGATGTC...........................................................................................2711.001.00-----1.00--------------------------------------------------------------------
.................................................................................................................................AGTCATCGGGGTAGCCTTCTCC..........................2211.001.00--------1.00-----------------------------------------------------------------
..............................................................ACCTAGGGAACGGGGATTGATGTCTG.........................................................................................2611.001.00------------------------1.00-------------------------------------------------
......................................................................AACGGGGATTGATGTCTGGGCTGC...................................................................................2411.0020.00--------1.00-----------------------------------------------------------------
..................................................GTGAGTGAACAGACCTAGGGAACGGGC....................................................................................................271.000.00----------1.00---------------------------------------------------------------
..........................................................................................................TAGCTCAGGTCTTTTCCCTATT.................................................221.000.00-----------------------------1.00--------------------------------------------
..........................................................................GGGATTGATGTCTGGGCT.....................................................................................1811.001.00---------------------1.00----------------------------------------------------
.....................................................AGTGAACAGACCTAGG............................................................................................................1611.001.00--------------------1.00-----------------------------------------------------
......................................................................AACGGGGATTGATGTCTGGGCTATA..................................................................................2511.0020.001.00-------------------------------------------------------------------------
......................................................................AACGGGGATTGATGTCTGGGCAAA...................................................................................2411.008.001.00-------------------------------------------------------------------------
.............................................................................................................................................AGCCTTCTCCTTGGCCTTT.................1911.001.00---------------------------------------------------------1.00----------------
.......................................................................ACGGGGATTGATGTCTGGGCTTCTA.................................................................................2511.007.001.00-------------------------------------------------------------------------
......................................................................AACGGGGATTGATGTCTGGGCTATT..................................................................................2511.0020.00-----------------------------------------------1.00--------------------------
......................................................................AACGGGGATTGATGTCTGGGCTTCCTC................................................................................2711.009.00---------1.00----------------------------------------------------------------
.................................................................TAGGGAACGGGGATTGATGTCT..........................................................................................2211.001.00---------------------------------------------------1.00----------------------
.......................................................................ACGGGGATTGATGTCTGGGCTT....................................................................................2211.001.00--1.00-----------------------------------------------------------------------
.................................................................TAGGGAACGGGGATT.................................................................................................1540.250.25-------------------------------------------------------------------------0.25

Antisense strand
CAGCCATTGTCGCTGACCTGGGCTCACCTCCAACCCGCAGCCAAGGCATGGTGAGTGAACAGACCTAGGGAACGGGGATTGATGTCTGGGCTTCAGACTCCATGCCTAGCTCAGGTCTTTTCCCTAGGCAGTCATCGGGGTAGCCTTCTCCTTGGCCTTTACTCTGGGTCCCATGCT
.................................................................(((((((.(((..((((...((((((............)))))).)))).))).)))))))...................................................
.................................................................66...........................................................127................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
mjTestesWT1()
Testes Data. (testes)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
mjLiverWT1()
Liver Data. (liver)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
mjTestesWT2()
Testes Data. (testes)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR206942(GSM723283)
other. (brain)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR553585(SRX182791)
source: Kidney. (Kidney)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
GSM510455(GSM510455)
newborn_rep11. (total RNA)
SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
................CCTGGGCTCACCTCCAACCCGC........................................................................................................................................... 2212.002.00-----2.00--------------------------------------------------------------------
....................................................................................................................CTTTTCCCTAGGCAGGCCG.......................................... 191.000.00-------------------------------------------------------1.00------------------
..........................................................................................CTTCAGACTCCATGCCTATTC.................................................................. 211.000.00------------------------------1.00-------------------------------------------
...........................................................................................TTCAGACTCCATGCCTAGCTCAGG.............................................................. 2411.001.00-------------------------------------------1.00------------------------------
........................CACCTCCAACCCGCAGTGC...................................................................................................................................... 191.000.00-----------------------------------------------------1.00--------------------
............................TCCAACCCGCAGCCAAGGCAT................................................................................................................................ 2111.001.00-------------------------------------------------------------------1.00------
..........................................................................................CTTCAGACTCCATGCCTAGCTCA................................................................ 2311.001.00--------1.00-----------------------------------------------------------------
..........................................................................................CTTCAGACTCCATGCCTAC.................................................................... 191.000.00------------------------------1.00-------------------------------------------
..........................CCTCCAACCCGCAGCCGGG.................................................................................................................................... 191.000.00----------------------------------------1.00---------------------------------
...................................................................................................................................................CTCCTTGGCCTTTACTCTGGGTCCCA.... 2611.001.00-------1.00------------------------------------------------------------------
........................................................................................GGCTTCAGACTCCATGCCT...................................................................... 1911.001.00------------------------------------------------1.00-------------------------