ID: uc008wbq.0
GENE: Megf6(0)
chr4:153638737-153639228+


(2)
AGO1.ip
(1)
AGO2.ip
(1)
AGO3.ip
(17)
BRAIN
(3)
CELL-LINE
(1)
DCR.mut
(2)
DGCR8.mut
(8)
EMBRYO
(2)
ESC
(1)
KIDNEY
(3)
LIVER
(2)
LUNG
(8)
OTHER
(1)
OTHER.mut
(1)
OVARY
(4)
SKIN
(6)
TESTES
(5)
TOTAL-RNA

Sense strand
TGCCCAGCAGGAGCAATGTTTACACAACCTTGAAACAGGAGATACTTAGAGTAAGCATTACAGTGTCACATCCATATTGCACCAAGATATAGGGGTGGAGAAACCAGCATTTGAATGATACAAGTGCACAACACATTCTGCCTACACTGTCCCAGCCCGGGAGGAGAGGAACGGGGTCCTTAGGCTCCCTGTATGCTTCCAAGATTTGCGGATGGGCTGTGAGTGGGTCAGGGTAGCTGGCCTTAGAGACAGCCCTAGTGAGATCCTACATGGATCCTTAAGACAAGGTCTGGGACCCTTACCTCCCATCTGGGGAGAGGGTAGGAGGAGTGTAGGGTAAGGTCAGCTGTCCCCACTGTTGAGAGTGGAGGAGCTTCTTTGTCAGGGGCTCTGGCCAGACTTGGTGTCCTAATCTGATGCAAGACTGGCCTTTGTGTCTCAGGGTGTCGCCAAGGCTACTTTGGGCCCGGCTGCGAGCAGAAGTGCAGGTGT
................................................................................................................................................................................................................................................................................................................................................................................................(((((...((((((.(((.(((((.......)))))))).)))))).....)))))....................................................
........................................................................................................................................................................................................................................................................................................................................................................................377..............................................................442................................................
SizePerfect hitTotal NormPerfect NormSRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjLiverWT1()
Liver Data. (liver)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
mjTestesWT4()
Testes Data. (testes)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
SRR206940(GSM723281)
other. (brain)
SRR037937(GSM510475)
293cand2. (cell line)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR037914(GSM510451)
newborn_rep7. (total RNA)
RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR206941(GSM723282)
other. (brain)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR073954(GSM629280)
total RNA. (blood)
SRR065050(SRR065050)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
GSM510455(GSM510455)
newborn_rep11. (total RNA)
SRR345206(SRX097267)
source: size fractionated RNA from mouse hipp. (brain)
SRR037905(GSM510441)
brain_rep2. (brain)
GSM510454(GSM510454)
newborn_rep10. (total RNA)
SRR073955(GSM629281)
total RNA. (blood)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR206939(GSM723280)
other. (brain)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
mjTestesWT2()
Testes Data. (testes)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)
GSM510452(GSM510452)
newborn_rep8. (total RNA)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
SRR206942(GSM723283)
other. (brain)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
GSM509276(GSM509276)
small RNA cloning by length. (testes)
SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
.............................................................................................................................................................................................................................................................................................................................................................................................TCAGGGGCTCTGGCCAGACTTG.........................................................................................22157.0057.0013.0010.006.0010.00---2.00-1.00-1.00-1.00----1.00-1.001.00-1.00------1.00--1.001.00---1.00----1.00---1.001.00--1.001.00-------
.............................................................................................................................................................................................................................................................................................................................................................................................TCAGGGGCTCTGGCCAGACTTGA........................................................................................23122.0057.002.003.001.00-3.00---1.00-2.00--1.001.00----2.00---1.00---------------1.001.00----1.001.00--------1.00----
..............................................................................................................................................................................................................................................................................................................................................................................................CAGGGGCTCTGGCCAGACTTG.........................................................................................2119.009.002.003.001.00--2.00--------------1.00---------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................CAGGGGCTCTGGCCAGACTTGA........................................................................................2217.009.003.001.001.00-------1.00--------------------1.00----------------------------
....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGACTGGCCTTTGTGTCTCA...................................................2116.006.00----5.00----1.00--------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................TCAGGGGCTCTGGCCAGACTTGT........................................................................................2315.0057.001.001.00-----------------------2.00-1.00--------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTTTGGGCCCGGCTGCGAGCAGA...........2515.005.00------5.00-----------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................TCAGGGGCTCTGGCCAGACT...........................................................................................2014.004.00-------1.00---1.00------1.00-----------------------------------1.00-----
....................................................................................................................................................................................................................................................................................................................................................................................................................................AAGACTGGCCTTTGTGTCTCAG..................................................2214.004.00-----3.00-----1.00------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAGACTGGCCTTTGTGTCTCAG..................................................2413.003.00------------3.00-----------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................TCAGGGGCTCTGGCCAGACTT..........................................................................................2113.003.00--------1.001.00----------------------------------------------1.00---
..............................................................................................................................................................................................................................................................................................................................................................................................CAGGGGCTCTGGCCAGACTTGG........................................................................................2213.003.001.00-------------------------------------------1.00--------1.00------
.......................ACAACCTTGAAACAGGAGATACTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002.00------------------------2.00-----------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................CAGGGGCTCTGGCCAGACTTGT........................................................................................2212.009.00------------------------------------1.00------------1.00----------
......................................................................................................................................................................................................................................................................ATCCTACATGGATCCAAA....................................................................................................................................................................................................................182.000.00---------------2.00--------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCCCGGCTGCGAGCAGA...........2011.001.00--1.00---------------------------------------------------------
...............................................................................................................................................................................................................................................................................GGATCCTTAAGACAAGGT...........................................................................................................................................................................................................1811.001.00-----1.00------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGCCTTTGTGTCAGAG..................................................191.000.00-----------------1.00------------------------------------------
.............................................................................................................................................................CGGGAGGAGAGGAACATC.............................................................................................................................................................................................................................................................................................................................181.000.00--------------------------------------------------1.00---------
.................................................................................................................................................................AGGAGAGGAACGGGGGA..........................................................................................................................................................................................................................................................................................................................171.000.00----------------1.00-------------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGGCCTTTGTGTCTCCCA.................................................201.000.00------------------------------------------1.00-----------------
.................................................................................................................................................................................................................................................................................................CTGGGACCCTTACCTCCAGGC......................................................................................................................................................................................211.000.00--------------1.00---------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................AGGGGCTCTGGCCAGACTTGG........................................................................................2111.001.00-----------------------------------------1.00------------------
.........................................................................................................................................................................................................AGATTTGCGGATGG.....................................................................................................................................................................................................................................................................................1411.001.00----------------------1.00-------------------------------------
.......................ACAACCTTGAAACAGGAGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001.00--1.00---------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................TCAGGGGCTCTGGCCAGACTTAAT.......................................................................................2411.003.00--------1.00---------------------------------------------------
...................................................................................................................................................................................................................................................................................................................ATCTGGGGAGAGGGTGT........................................................................................................................................................................171.000.00--------------------------------1.00---------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................TCAGGGGCTCTGGCCAGACTTGAA.......................................................................................2411.0057.001.00-----------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................TCAGGGGCTCTGGCCAGACTTGGTGTC....................................................................................2711.001.00---------------------------------------------------------1.00--
...........................................................................................................................................................CCCGGGAGGAGAGGAAGTC..............................................................................................................................................................................................................................................................................................................................191.000.00---------1.00--------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................TCAGGGGCTCTGGCCAGACTTGAAA......................................................................................2511.0057.00------1.00-----------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................TCAGGGGCTCTGGCCAGACTTTA........................................................................................2311.003.00-------1.00----------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................TCAGGGGCTCTGGCCAGACTTT.........................................................................................2211.003.00--1.00---------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................AGACTGGCCTTTGTGTCTCAGT.................................................221.000.00-----------------------------------------------------------1.00
....................................................................................................................................................................AGAGGAACGGGGTCCAGGT.....................................................................................................................................................................................................................................................................................................................191.000.00----------------------1.00-------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTGGGCCCGGCTGCGAGCAGAAG.........2611.001.00-1.00----------------------------------------------------------
........................................................................................................................................................................................................AAGATTTGCGGATGGTTGC.................................................................................................................................................................................................................................................................................191.000.00--------------------------1.00---------------------------------
...........................................................................................................................................................CCCGGGAGGAGAGGAATG...............................................................................................................................................................................................................................................................................................................................181.000.00----------------------------------------------------------1.00-
...............................................................................................................................................ACACTGTCCCAGCCCGGGAGGAGAGGAACGGGGTCCTTAGGCTCCCTGTATGCTTCCAAGATTTGCGGATGGGCTGTGAGTGGGTCAGGG...................................................................................................................................................................................................................................................................9011.001.00-------------------------------------1.00----------------------
................................................................................................................................................................................................................................................................................................................................................................................AGGAGCTTCTTTGTCAGGGGCTCTG...................................................................................................2511.001.00-------------1.00----------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................................................CAGGGGCTCTGGCCAGACTTGGAA......................................................................................2411.003.00---------------------1.00--------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GCCTTTGTGTCTCAGCTTC..............................................191.000.00----------------------------1.00-------------------------------

Antisense strand
TGCCCAGCAGGAGCAATGTTTACACAACCTTGAAACAGGAGATACTTAGAGTAAGCATTACAGTGTCACATCCATATTGCACCAAGATATAGGGGTGGAGAAACCAGCATTTGAATGATACAAGTGCACAACACATTCTGCCTACACTGTCCCAGCCCGGGAGGAGAGGAACGGGGTCCTTAGGCTCCCTGTATGCTTCCAAGATTTGCGGATGGGCTGTGAGTGGGTCAGGGTAGCTGGCCTTAGAGACAGCCCTAGTGAGATCCTACATGGATCCTTAAGACAAGGTCTGGGACCCTTACCTCCCATCTGGGGAGAGGGTAGGAGGAGTGTAGGGTAAGGTCAGCTGTCCCCACTGTTGAGAGTGGAGGAGCTTCTTTGTCAGGGGCTCTGGCCAGACTTGGTGTCCTAATCTGATGCAAGACTGGCCTTTGTGTCTCAGGGTGTCGCCAAGGCTACTTTGGGCCCGGCTGCGAGCAGAAGTGCAGGTGT
................................................................................................................................................................................................................................................................................................................................................................................................(((((...((((((.(((.(((((.......)))))))).)))))).....)))))....................................................
........................................................................................................................................................................................................................................................................................................................................................................................377..............................................................442................................................
SizePerfect hitTotal NormPerfect NormSRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjLiverWT1()
Liver Data. (liver)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
mjTestesWT4()
Testes Data. (testes)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
SRR206940(GSM723281)
other. (brain)
SRR037937(GSM510475)
293cand2. (cell line)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR037914(GSM510451)
newborn_rep7. (total RNA)
RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR206941(GSM723282)
other. (brain)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR073954(GSM629280)
total RNA. (blood)
SRR065050(SRR065050)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
GSM510455(GSM510455)
newborn_rep11. (total RNA)
SRR345206(SRX097267)
source: size fractionated RNA from mouse hipp. (brain)
SRR037905(GSM510441)
brain_rep2. (brain)
GSM510454(GSM510454)
newborn_rep10. (total RNA)
SRR073955(GSM629281)
total RNA. (blood)
SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR206939(GSM723280)
other. (brain)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
mjTestesWT2()
Testes Data. (testes)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)
GSM510452(GSM510452)
newborn_rep8. (total RNA)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
SRR206942(GSM723283)
other. (brain)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
GSM509276(GSM509276)
small RNA cloning by length. (testes)
SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
..................................................................................................................................................CTGTCCCAGCCCGGGACTGA...................................................................................................................................................................................................................................................................................................................................... 201.000.00----------------1.00-------------------------------------------
......................................................................................................................................................................................GGCTCCCTGTATGCTGAA.................................................................................................................................................................................................................................................................................................... 181.000.00-----------------------------------1.00------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGTCCTAATCTGATGCAAG..................................................................... 2211.001.00-----------------------------1.00------------------------------
..........................................................................................................................................................................................CCCTGTATGCTTCCATCC................................................................................................................................................................................................................................................................................................ 181.000.00--------------------------1.00---------------------------------
...................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGGCCAGACTTG......................................................................................... 161.000.00--------1.00---------------------------------------------------
..................................................................................................................................................CTGTCCCAGCCCGGGGGC........................................................................................................................................................................................................................................................................................................................................ 181.000.00-----------------1.00------------------------------------------