ID: uc008ute.0
GENE: Adprhl2(5)
chr4:125994060-125994596-


(1)
AGO1.ip
(3)
AGO2.ip
(1)
B-CELL
(19)
BRAIN
(8)
CELL-LINE
(3)
DCR.mut
(1)
DGCR8.mut
(10)
EMBRYO
(4)
ESC
(2)
FIBROBLAST
(1)
HEART
(1)
KIDNEY
(3)
LIVER
(1)
LUNG
(1)
LYMPH
(11)
OTHER
(1)
OTHER.mut
(1)
PANCREAS
(4)
PIWI.ip
(1)
PIWI.mut
(2)
SKIN
(1)
SPLEEN
(1)
TDRD1.ip
(14)
TESTES
(1)
THYMUS
(2)
TOTAL-RNA

Sense strand
GCTGCTGGACCAGGACGTGGTGAGCCGAGAGGAAGTGGTGTCCGAGCTAGGTGAGTGGACCCCTGCTGACCGTGGAGCAGAGAAGGCTTCTGGGACAGTAGAGCTCCTCTTTGTAGGGTCCCTAGCTGGGCTTTGTACACTGTGCCTGCAGCCTTGACGATCAGTATCCCCAGAAAAGGCAGCTGGCAGCCAGTTTGTTCTCTAGTGTGGTTGTGGATGTAAATTTGCCTGGTACCTGTGCCCTGGGCACTGTGTGGAGGCCTTCACAGTGACCCGCCTTTCAACAGCCCTGGGAGAGAGAGAGAGCAAGGATTAAAGACGAGCGCAGGACTAAGTGGGACCCTTGCCTGGCCACCAGCAGGCTTGTTGGGTCCCGAGTAGTCTTACAATAGAGCCTGGGGTCTCAGGCATGGCCCTGCACAAAGCTGGGAGTGCCAGCTCTTGGCAGGAAGCAAGGTCAAGTTCCTGTGCCCTGGCTTTCCCACAGGGAATGGCATTGCCGCCTTTGAATCTGTGCCCACCGCCATCTACTGCTTC
..........................................................................................................................................................................................................................................................................................................................................................................................................................................((((((.(((((......(((((.(((........))))))))...))))).)))))).....................................................
.....................................................................................................................................................................................................................................................................................................................................................................................................................................422..............................................................487................................................
SizePerfect hitTotal NormPerfect NormSRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR206939(GSM723280)
other. (brain)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR206942(GSM723283)
other. (brain)
SRR073954(GSM629280)
total RNA. (blood)
SRR206941(GSM723282)
other. (brain)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR037937(GSM510475)
293cand2. (cell line)
SRR346415(SRX098256)
source: Testis. (Testes)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
mjTestesWT3()
Testes Data. (testes)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)
SRR073955(GSM629281)
total RNA. (blood)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR206940(GSM723281)
other. (brain)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR037905(GSM510441)
brain_rep2. (brain)
SRR553603(SRX182809)
source: Spermatids. (Spermatids)
GSM510453(GSM510453)
newborn_rep9. (total RNA)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)
SRR014236(GSM319960)
10 dpp total. (testes)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)
SRR059765(GSM562827)
DN3_control. (thymus)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR037906(GSM510442)
brain_rep3. (brain)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR037926(GSM510464)
e9p5_rep4. (embryo)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
SRR553585(SRX182791)
source: Kidney. (Kidney)
SRR059771(GSM562833)
CD4_control. (spleen)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR553584(SRX182790)
source: Heart. (Heart)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCCTGGCTTTCCCACAGT.................................................22132.0017.00-1.002.006.00-1.00-3.00-----2.00-3.002.00-1.00---1.00---1.00-----2.00-1.00-1.00-----1.00---1.00--------------1.001.00-----------1.00--------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCCTGGCTTTCCCACAGA.................................................22119.0017.00-3.002.00--2.00--5.00-----2.00-1.00-2.00---------------1.001.00-----------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCCTGGCTTTCCCACAG..................................................21117.0017.0010.001.00-------------------1.00-------------1.001.00---1.00---1.00-------------------------------1.00------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGAATGGCATTGCCGCCTTT..............................2217.007.00-2.00-----1.00--2.00---------1.00-------1.00------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGAATGGCATTGCCGCCTT...............................2113.003.00-2.00------------------1.00--------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGCCAGCTCTTGGCAGG........................................................................................2313.003.00----3.00------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCCTGGCTTTCCCACAGTT................................................2313.0017.00--------------1.00-------------------------------------------1.00-------------1.00----------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCCTGGCTTTCCCACAGAA................................................2313.0017.00----2.00--1.00---------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGCCCTGGCTTTCCCACAG..................................................2213.003.00--------------------1.00--------2.00-----------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCCTGGCTTTCCCACAGTA................................................2312.0017.00-------------1.00---------------------------------------------------1.00-----------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGCCAGCTCTTGGCAGGAAT.....................................................................................262.000.00-------------------2.00---------------------------------------------------------------
.................................................................................GAAGGCTTCTGGGACAGTAGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.002.00--------------------------------------2.00--------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGAGTGCCAGCTCTTGGA...........................................................................................2112.001.00-------------------------------------2.00---------------------------------------------
..................................................................................AAGGCTTCTGGGACATCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................182.000.00-------------------------------2.00---------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGCCAGCTCTTGGCAGGA.......................................................................................2412.002.00--2.00--------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGAGTGCCAGCTCTTGGCAGGAA......................................................................................2611.001.00-------------------1.00---------------------------------------------------------------
..........................................................................................................................................................TGACGATCAGTATCCCCAGAAAAGGCAG...................................................................................................................................................................................................................................................................................................................................................................2811.001.00-------------------------------------------------1.00---------------------------------
...GCTGGACCAGGACGTGGTGAGCCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001.00-----------------------------------------------------------------------1.00-----------
...........................AGAGGAAGTGGTGTCCCCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................201.000.00---------1.00-------------------------------------------------------------------------
............................................................................................................................................................ACGATCAGTATCCCC..............................................................................................................................................................................................................................................................................................................................................................................1511.001.00------------------------------------------------1.00----------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCCTGGCTTTCCCACAGTAT...............................................2411.0017.00------------------------------------------------------------------1.00----------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGCCCTGGCTTTCCCACAGA.................................................2311.003.00--------------------------------------------------1.00--------------------------------
........................................................................................................................CCTAGCTGGGCTTTGTGGGC.............................................................................................................................................................................................................................................................................................................................................................................................................201.000.00------------------------------------------------------------------------------1.00----
............................................................................................................................................................................................................................................................................................................................................AAGTGGGACCCTTGCCTGGCCAAAT....................................................................................................................................................................................251.000.00----------------------------1.00------------------------------------------------------
..........................................................................................................................................ACTGTGCCTGCAGCCATA.............................................................................................................................................................................................................................................................................................................................................................................................181.000.00-----------------1.00-----------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAGTGCCAGCTCTTGGCAGGAA......................................................................................2411.001.00-----------------------------------------------------------------------------1.00-----
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCAGGAAGCAAGGTCAAGTTC........................................................................2311.001.00----------------------------------------------------1.00------------------------------
...........................................................................................................................................................................................................................................................................................................................AAGACGAGCGCAGGACTAAGTGGGA.....................................................................................................................................................................................................2511.001.00-------------------------1.00---------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGCCCTGGCTTTCCCACAGT.................................................2311.003.00--------------------------1.00--------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCCTGGCTTTCCCA.....................................................1811.001.00--------------------------------------------------------1.00--------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGAGTGCCAGCTCTTGGCAGGAC......................................................................................261.000.00---------------------1.00-------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGTGCCCTGGCTTTCCCACAG..................................................2311.001.00-------------------------1.00---------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................GAGCAAGGATTAAAGATCG.......................................................................................................................................................................................................................191.000.00-----------------1.00-----------------------------------------------------------------
..TGCTGGACCAGGACGTGGTGAGCCGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00-----------1.00-----------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGCCAGCTCTTGGCAAA........................................................................................231.000.00-----------------------------------------1.00-----------------------------------------
.......................................................................................................................................................................................................................................................................TCACAGTGACCCGCCCTCT...............................................................................................................................................................................................................................................................191.000.00-----------------------------------------------------------1.00-----------------------
.....................................................................................................................................TGTACACTGTGCCTGCAGCCTTGACG..........................................................................................................................................................................................................................................................................................................................................................................................2611.001.00---------------------------------1.00-------------------------------------------------
..................GGTGAGCCGAGAGGAAGTGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001.00---------------------------------------------------1.00-------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCCGCCTTTGAATCTGTGCCCACCGC.............2811.001.00------1.00----------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGCCCTGGCTTTCCCACA...................................................2111.001.00----------------------1.00------------------------------------------------------------
..................GGTGAGCCGAGAGGAAGT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00-----1.00-----------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................GGCTTGTTGGGTCCCGAC...............................................................................................................................................................181.000.00------------------------------1.00----------------------------------------------------
...........AGGACGTGGTGAGCCGAGAGGAAGTGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001.00-------------------------------------------1.00---------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGAGTGCCAGCTCTTGGCAGGAAC.....................................................................................261.000.00-----1.00-----------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCCTGGCTTTCCCACA...................................................2011.001.00-------------------------------------------------------------------1.00---------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCCTGGCTTTCCCAC....................................................1911.001.00--1.00--------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................................AGGATTAAAGACGAGAC....................................................................................................................................................................................................................171.000.00---------------------------------------------------------------1.00-------------------
........................................................................................................................................................................................................................................................................................................................................................................GGCTTGTTGGGTCCCCGG...............................................................................................................................................................181.000.00-----------------1.00-----------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGAGTGCCAGCTCG...............................................................................................171.000.00---------1.00-------------------------------------------------------------------------
........ACCAGGACGTGGTGAGCCGAGAGGAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00-----------------------1.00-----------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCCTGGCTTTCCCACT...................................................2011.001.00--1.00--------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCCTGGCTTTCCCACAGTGT...............................................2411.0017.001.00----------------------------------------------------------------------------------
.........................CGAGAGGAAGTGGTGTCCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001.00-------------------------------------------------------------------------1.00---------
........................................................................................................................................................................................................................................................................................................................................................................GGCTTGTTGGGTCCCCAG...............................................................................................................................................................181.000.00------------------------------1.00----------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGGAGTGCCAGCTCTTGG............................................................................................2011.001.00---------------------------------------------------------------------1.00-------------
........ACCAGGACGTGGTGAGCCGAGAGGAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00-----------------------1.00-----------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGTGCCCACCGCCATC.........1911.001.00---------------------------------------------1.00-------------------------------------
...........................................................................................................................................................................................................AGTGTGGTTGTGGATGT.............................................................................................................................................................................................................................................................................................................................1711.001.00-1.00---------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCCCTGGCTTTCCCACAGTTT...............................................2411.0017.00----------1.00------------------------------------------------------------------------
.....................................................................................................................................TGTACACTGTGCCTGCAGCCTTGACGT.........................................................................................................................................................................................................................................................................................................................................................................................2711.001.00-----------1.00-----------------------------------------------------------------------
..........................................................................................................................................ACTGTGCCTGCAGCCTTGACGAT........................................................................................................................................................................................................................................................................................................................................................................................2311.001.00--------------------------------------------------------------------1.00--------------
.....TGGACCAGGACGTGGTGAGCCGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001.00---------------------------------------1.00-------------------------------------------
...............................................................TGCTGACCGTGGAGCAGAGAAGGCTT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001.00------------------------------------------------------1.00----------------------------
.........................................................................................................................................................................................................................................................................................................................TAAAGACGAGCGCAGGACTAAGTGG.......................................................................................................................................................................................................2511.001.00------1.00----------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGGGAGTGCCAGCTCTTGGCA..........................................................................................2311.001.00-----------------------------------------------------1.00-----------------------------
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCCGCCTTTGAATCTGTGCC...................2311.001.00------------------------------------------------------------1.00----------------------
....................TGAGCCGAGAGGAAGTGGTGTCCGAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001.00------1.00----------------------------------------------------------------------------
............GGACGTGGTGAGCCGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001.00----------1.00------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAATCTGTGCCCAC................1620.500.50-------------------------------------------------------------------------------0.50---
..............ACGTGGTGAGCCGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1620.500.50----------------------------------------0.50------------------------------------------
.......................................................................................................................................................................................................................................................................TCACAGTGACCCGC....................................................................................................................................................................................................................................................................1430.330.33---------0.33-------------------------------------------------------------------------
......................................................................................................................................................................................................................................................................................................................................AGGACTAAGTGGGAC....................................................................................................................................................................................................1540.250.25--------------------------------------------------------------------------------0.25--
.......................................................................................................................................................................CCCCAGAAAAGGCAGC..................................................................................................................................................................................................................................................................................................................................................................1640.250.25---------------------------------------------------------------------------------0.25-
.........................................................................................CTGGGACAGTAGAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................1590.220.22----------------------------------------------------------------------------------0.22

Antisense strand
GCTGCTGGACCAGGACGTGGTGAGCCGAGAGGAAGTGGTGTCCGAGCTAGGTGAGTGGACCCCTGCTGACCGTGGAGCAGAGAAGGCTTCTGGGACAGTAGAGCTCCTCTTTGTAGGGTCCCTAGCTGGGCTTTGTACACTGTGCCTGCAGCCTTGACGATCAGTATCCCCAGAAAAGGCAGCTGGCAGCCAGTTTGTTCTCTAGTGTGGTTGTGGATGTAAATTTGCCTGGTACCTGTGCCCTGGGCACTGTGTGGAGGCCTTCACAGTGACCCGCCTTTCAACAGCCCTGGGAGAGAGAGAGAGCAAGGATTAAAGACGAGCGCAGGACTAAGTGGGACCCTTGCCTGGCCACCAGCAGGCTTGTTGGGTCCCGAGTAGTCTTACAATAGAGCCTGGGGTCTCAGGCATGGCCCTGCACAAAGCTGGGAGTGCCAGCTCTTGGCAGGAAGCAAGGTCAAGTTCCTGTGCCCTGGCTTTCCCACAGGGAATGGCATTGCCGCCTTTGAATCTGTGCCCACCGCCATCTACTGCTTC
..........................................................................................................................................................................................................................................................................................................................................................................................................................................((((((.(((((......(((((.(((........))))))))...))))).)))))).....................................................
.....................................................................................................................................................................................................................................................................................................................................................................................................................................422..............................................................487................................................
SizePerfect hitTotal NormPerfect NormSRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR206939(GSM723280)
other. (brain)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR206942(GSM723283)
other. (brain)
SRR073954(GSM629280)
total RNA. (blood)
SRR206941(GSM723282)
other. (brain)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR037937(GSM510475)
293cand2. (cell line)
SRR346415(SRX098256)
source: Testis. (Testes)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
mjTestesWT3()
Testes Data. (testes)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)
SRR073955(GSM629281)
total RNA. (blood)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR206940(GSM723281)
other. (brain)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR037905(GSM510441)
brain_rep2. (brain)
SRR553603(SRX182809)
source: Spermatids. (Spermatids)
GSM510453(GSM510453)
newborn_rep9. (total RNA)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)
SRR014236(GSM319960)
10 dpp total. (testes)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)
SRR059765(GSM562827)
DN3_control. (thymus)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR037906(GSM510442)
brain_rep3. (brain)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR037926(GSM510464)
e9p5_rep4. (embryo)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
SRR553585(SRX182791)
source: Kidney. (Kidney)
SRR059771(GSM562833)
CD4_control. (spleen)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR553584(SRX182790)
source: Heart. (Heart)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)
...................................................................................................................................................GCAGCCTTGACGATCAGTATCCCCAGA........................................................................................................................................................................................................................................................................................................................................................................... 2713.003.00------1.00-----2.00----------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................ACCCGCCTTTCAACAGCCCTGGGAGA................................................................................................................................................................................................................................................ 2612.002.00-----------1.00---------------------1.00-------------------------------------------------
................................................................................................................................................CCTGCAGCCTTGACGATCAGTATCCCCA............................................................................................................................................................................................................................................................................................................................................................................. 2812.002.00---------------------------2.00-------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................GCTTGTTGGGTCCCGAGTAGTCTTACAA.................................................................................................................................................... 2811.001.00-----------1.00-----------------------------------------------------------------------
.........................................................................................CTGGGACAGTAGAGCTCGC............................................................................................................................................................................................................................................................................................................................................................................................................................................. 1991.000.00------------------------1.00----------------------------------------------------------
.........................................................................................CTGGGACAGTAGAGCTGTC............................................................................................................................................................................................................................................................................................................................................................................................................................................. 1991.000.00------------------------1.00----------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................................................................TACAATAGAGCCTGGTAA....................................................................................................................................... 181.000.00-------------------------------------------------------1.00---------------------------
....................................GGTGTCCGAGCTAGGTGAGTGG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 2211.001.00-----------------------------------------------1.00-----------------------------------
......................................................................................................................................................GCCTTGACGATCAGTATCCCCAGAA.......................................................................................................................................................................................................................................................................................................................................................................... 2511.001.00------------1.00----------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................TGACCCGCCTTTCAACAGCCCTGGGAGA................................................................................................................................................................................................................................................ 2811.001.00---------------------------------------------------------1.00-------------------------
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCTGGCTTTCCCAGC................................................... 171.000.00---------1.00-------------------------------------------------------------------------
...............................................................................................................................................GCCTGCAGCCTTGACGATCAGTATCCCC.............................................................................................................................................................................................................................................................................................................................................................................. 2811.001.00------------1.00----------------------------------------------------------------------
........................CCGAGAGGAAGTGGTGTCCGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 2111.001.00------1.00----------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................GTGACCCGCCTTTCAACAGCCCTGGGA.................................................................................................................................................................................................................................................. 2711.001.00---------------------------------------1.00-------------------------------------------
....................................................................................................................................................................................................................................................................................CCTTTCAACAGCCCTAA.................................................................................................................................................................................................................................................... 171.000.00---------1.00-------------------------------------------------------------------------
.....................................................................................................................................................AGCCTTGACGATCAGTATCCCCAGAAA......................................................................................................................................................................................................................................................................................................................................................................... 2711.001.00----------------------------------------------------------------------1.00------------
.....................................................................................................................................................AGCCTTGACGATCAGTATCCCCAGAA.......................................................................................................................................................................................................................................................................................................................................................................... 2611.001.00---------------------------------------------------------------------------1.00-------
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTGCCGCCTTTGAATAT........................ 191.000.00----------------------------------------------------------------1.00------------------
........................................................................................................................................................................................................................................................................................TCAACAGCCCTGGGAG................................................................................................................................................................................................................................................. 1640.250.25---------------------0.25-------------------------------------------------------------
....................................................................................................................................................................................................................................................................................CCTTTCAACAGCCCTG..................................................................................................................................................................................................................................................... 1640.250.25-------------------------------------------------------------------------------0.25---
...................................................................................................................................................................................................................................................................................GCCTTTCAACAGCCC....................................................................................................................................................................................................................................................... 1550.200.20----------0.20------------------------------------------------------------------------