ID: uc008jba.8
GENE: Pkn3(9)
chr2:29940237-29940419+


(2)
AGO1.ip 		(5)
AGO2.ip 		(2)
AGO3.ip 		(5)
B-CELL 		(8)
BRAIN 		(2)
CELL-LINE 		(2)
DGCR8.mut 		(2)
EMBRYO 		(10)
ESC 		(3)
FIBROBLAST 		(5)
HEART 		(1)
KIDNEY 		(1)
LIVER 		(2)
LUNG 		(2)
LYMPH 		(10)
OTHER 		(4)
OTHER.mut 		(1)
OVARY 		(1)
PANCREAS 		(1)
PIWI.ip 		(1)
PIWI.mut 		(7)
SKIN 		(3)
SPLEEN 		(18)
TESTES 		(2)
THYMUS 		(2)
UTERUS

Sense strand
AAGGAGGCCTCGGCTGCAGAGGCAGAGATGCATTTTCTCTAAGCGGAGAGGTGTGGAGCATACGGACTGTGTGAGGAGAGGGCTGGGCTGACCAATGGGGATGCTGGGACTGAGCCCCGCCTGCCTCCTCTAGGCCGGGATTTCATGAGAGCTTCCCAGATGAACCTCAGCATGGCAGCCTGG
........................................................................((((((.((((.(((((..(((..........))).....))))).))))..)))))).....................................................
.................................................................66.................................................................133................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		mjTestesWT4()
Testes Data. (testes)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		mjTestesWT2()
Testes Data. (testes)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR553584(SRX182790)
source: Heart. (Heart)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR206940(GSM723281)
other. (brain)		SRR206941(GSM723282)
other. (brain)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR095855BC1(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR346415(SRX098256)
source: Testis. (Testes)		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR095855BC5(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR042481(GSM539873)
mouse pancreatic tissue [09-002]. (pancreas)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR553585(SRX182791)
source: Kidney. (Kidney)		GSM509276(GSM509276)
small RNA cloning by length. (testes)		SRR095855BC8(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR306536(GSM750579)
19-24nt. (ago2 brain)
......................................................................GTGAGGAGAGGGCTGGGCTGA............................................................................................21175.0075.0021.0017.0013.006.002.001.002.00---5.00-----1.00----------------2.00-2.00-------1.00--------1.00-----1.00--------------------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGA............................................................................................22173.0073.0028.0018.006.008.00-1.001.001.003.00-----1.00------2.00---------------1.00---1.00------------1.00------------------1.00-----------
.......................................................................TGAGGAGAGGGCTGGGCTGA............................................................................................20132.0032.0012.0011.001.00---1.00----1.00-------3.00-----------1.00-------1.00---------------1.00-----------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGAAT..........................................................................................23118.0075.007.003.00--1.00-2.00----------1.00-----------1.00------1.00-1.00--------------------1.00-------------------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGAA...........................................................................................23115.0073.003.003.005.00-----3.00--------------------------------------1.00-------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGAT...........................................................................................22114.0075.008.00--1.00-2.00-----1.00-------1.00-1.00---------------------------------------------------------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGAAT..........................................................................................24114.0073.007.003.00---------1.00--------------2.00------------------------------------1.00---------------------
......................................................................GTGAGGAGAGGGCTGGGCTGAAA..........................................................................................23113.0075.003.005.00--1.00---------------------------1.00---------------1.00-------1.00--------------1.00-------------
......................................................................GTGAGGAGAGGGCTGGGCTGAAAT.........................................................................................24112.0075.001.001.004.00-1.00-----------------3.00---------------1.00-1.00--------------------------------------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGAAA..........................................................................................24111.0073.003.007.00--1.00--------------------------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGAA...........................................................................................22111.0075.005.00---2.001.00-----------1.00-------1.00----1.00------------------------------------------------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGAAAT.........................................................................................2519.0073.002.00-5.001.00-1.00-------------------------------------------------------------------------------
.......................................................................TGAGGAGAGGGCTGGGCTGAA...........................................................................................2119.0032.003.005.00-------------------------1.00---------------------------------------------------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGATT..........................................................................................2419.0073.002.00-4.001.001.00----------------------------------------------------------------------------1.00---
.....................................................................TGTGAGGAGAGGGCTGGGCTGT............................................................................................2218.003.002.002.00-2.00---1.00------------------------1.00----------------------------------------------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGAT...........................................................................................2318.0073.007.00-----------------------------1.00------------------------------------------------------
.......................................................................TGAGGAGAGGGCTGGGCTGAT...........................................................................................2117.0032.003.00-4.00----------------------------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGT............................................................................................2116.003.003.00--1.00-1.00--------------------------------------------------------1.00----------------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGTAGA.........................................................................................2516.003.001.00--------5.00---------------------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGAAC..........................................................................................2316.0075.00--6.00----------------------------------------------------------------------------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGAG...........................................................................................2315.0073.00-4.00-1.00---------------------------------------------------------------------------------
.......................................................................TGAGGAGAGGGCTGGGCTGAAT..........................................................................................2215.0032.004.00-------------1.00----------------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGTAA..........................................................................................2314.003.001.00--2.00-----------------------------------------------1.00---------------------------------
......................................................................GTGAGGAGAGGGCTGGGCT..............................................................................................1914.004.00------------------------2.00--------------------------------------------1.001.00--------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGTAA..........................................................................................2414.003.00-3.001.00----------------------------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGTA...........................................................................................2213.003.001.00--2.00---------------------------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTG.............................................................................................2013.003.001.002.00-----------------------------------------------------------------------------------
.......................................................................TGAGGAGAGGGCTGGGCTGAAA..........................................................................................2213.0032.00-2.00-------------------------------------1.00---------------------------------------------
.....................................................................TGTGAGGAGAGGGCTGGGCTG.............................................................................................2113.003.00-2.00-----------------------------------------------1.00-----------------------------------
.......................................................................TGAGGAGAGGGCTGGGCT..............................................................................................1813.003.00-------------------------1.00-------------------1.00----1.00----------------------------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGAAAG.........................................................................................2512.0073.00-2.00-----------------------------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGAGA..........................................................................................2312.0075.00---1.00--------------------------------------------------------------------------1.00------
......................................................................GTGAGGAGAGGGCTGGGCTGAATT.........................................................................................2412.0075.00---1.00--1.00------------------------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGAAAA.........................................................................................2412.0075.00----------------------------1.00-------------1.00------------------------------------------
................................TTTTCTCTAAGCGGAGAG.....................................................................................................................................1812.002.00-------------2.00-----------------------------------------------------------------------
.................................TTTCTCTAAGCGGAGAG.....................................................................................................................................1712.002.00-------------1.00------------------------------------------------------1.00----------------
.......................................................................TGAGGAGAGGGCTGGGCTGAC...........................................................................................2112.002.00-2.00-----------------------------------------------------------------------------------
..................................................GTGTGGAGCATACGGACTGTGTGAGT...........................................................................................................2612.001.00----------------2.00--------------------------------------------------------------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGAAGT.........................................................................................2512.0073.002.00------------------------------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGATT..........................................................................................2312.0075.00-------1.00--------------------------1.00--------------------------------------------------
.......................................................................TGAGGAGAGGGCTGGGCTGT............................................................................................2012.001.001.00-----------------------------------1.00------------------------------------------------
.......................................................................TGAGGAGAGGGCTGGGCTGTT...........................................................................................2112.001.002.00------------------------------------------------------------------------------------
................................................................................................................AGCCCCGCCTGCCTCCTCTAGT.................................................2212.001.00-----------------------1.00-------1.00-----------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGAATA.........................................................................................2412.0075.00--2.00----------------------------------------------------------------------------------
.............................................................ACGGACTGTGTGAGGAGAGGGCTGGT................................................................................................262.000.00------------------2.00------------------------------------------------------------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGAAC..........................................................................................2412.0073.001.00---1.00--------------------------------------------------------------------------------
....................................................................GTGTGAGGAGAGGGCTGGGCTGA............................................................................................2312.002.00------------------1.00--------------------------------------------------------1.00---------
....................................................................GTGTGAGGAGAGGGCTGGGCTGAT...........................................................................................2412.002.002.00------------------------------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGTATA.........................................................................................2411.003.00-----------1.00-------------------------------------------------------------------------
.......................................................................TGAGGAGAGGGCTGGGCTG.............................................................................................1911.001.00------------------------------------------------------------------1.00------------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGTAAA.........................................................................................2511.003.001.00------------------------------------------------------------------------------------
........................................................................GAGGAGAGGGCTGGGCTGAAT..........................................................................................211.000.00--------------------------------------------------------------------------1.00----------
..................................................GTGTGGAGCATACGGACTGTGTGA.............................................................................................................2411.001.00-------------------------------------1.00-----------------------------------------------
...................................................................................................GATGCTGGGACTGAGTGG..................................................................181.000.00------------1.00------------------------------------------------------------------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGATAA.........................................................................................2511.0073.001.00------------------------------------------------------------------------------------
..........................................................CATACGGACTGTGTGAGGAGAGGGCTGGGC...............................................................................................3011.001.00-----------------------------------------------------------------------------------1.00-
......................................................................GTGAGGAGAGGGCTGGGCTGAATTT........................................................................................2511.0075.00-----------------1.00-------------------------------------------------------------------
.....................................................................TGTGAGGAGAGGGCTGGAAA..............................................................................................201.000.00-1.00-----------------------------------------------------------------------------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGTT...........................................................................................2311.003.001.00------------------------------------------------------------------------------------
................................................................................................................AGCCCCGCCTGCCTCCTCTAG..................................................2111.001.00-----------------------1.00-------------------------------------------------------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGAAAA.........................................................................................2511.0073.00--------------------------------------------------------------------------------1.00----
.....................................................................TGTGAGGAGAGGGCTGGGCTGAAGA.........................................................................................2511.0073.001.00------------------------------------------------------------------------------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGTAT..........................................................................................2411.003.00---1.00---------------------------------------------------------------------------------
.......................................................................TGAGGAGAGGGCTGGGCTGATT..........................................................................................2211.0032.00----------------------------------1.00--------------------------------------------------
.......................................................................TGAGGAGAGGGCTGGGCTGAGAG.........................................................................................2311.0032.00---------------------------------------------------------1.00---------------------------
....................................................................GTGTGAGGAGAGGGCTGGGCTGCAT..........................................................................................251.000.00-----1.00-------------------------------------------------------------------------------
.......................................................................TGAGGAGAGGGCTGGGCTGAAGA.........................................................................................2311.0032.00--------------------1.00----------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGATATT........................................................................................2511.0075.001.00------------------------------------------------------------------------------------
.......................................................................TGAGGAGAGGGCTGGGCTGTATT.........................................................................................2311.001.00-----------1.00-------------------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGAAGC.........................................................................................2411.0075.00---1.00---------------------------------------------------------------------------------
....................................................................GTGTGAGGAGAGGGCTGGGCTGATA..........................................................................................2511.002.001.00------------------------------------------------------------------------------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGATG..........................................................................................2411.0073.001.00------------------------------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGATAT.........................................................................................2411.0075.00-------------------------------------------------------------1.00-----------------------
......................................................................GTGAGGAGAGGGCTGGGCTGAATAG........................................................................................2511.0075.00-----------------1.00-------------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGAAGAT........................................................................................2511.0075.00--------------------1.00----------------------------------------------------------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGATA..........................................................................................2411.0073.00---1.00---------------------------------------------------------------------------------
.......................................................................TGAGGAGAGGGCTGGGCTGACC..........................................................................................2211.001.001.00------------------------------------------------------------------------------------
.......................................................................TGAGGAGAGGGCTGGGCTA.............................................................................................1911.003.001.00------------------------------------------------------------------------------------
........................................................................................................................................................TTCCCAGATGAACCTCAGCATG.........2211.001.00-------------------------------------------------------------------1.00-----------------
....................................................................GTGTGAGGAGAGGGCTGGGCTGAAA..........................................................................................2511.002.00---1.00---------------------------------------------------------------------------------
...................................................................................................................CCCGCCTGCCTCCTCTAGT.................................................191.000.00-----------------------------------------------------1.00-------------------------------
............................................................TACGGACTGTGTGAGGAGAGGGCTGG.................................................................................................2611.001.00-----------------------------------------------------------------------------1.00-------
......................................................................GTGAGGAGAGGGCTGGGCTGAAGA.........................................................................................2411.0075.00----------------------------1.00--------------------------------------------------------
.......................................TAAGCGGAGAGGTGTGGAGCATACG.......................................................................................................................2511.001.00-------1.00-----------------------------------------------------------------------------
.......................................................................TGAGGAGAGGGCTGGGCTGAAAT.........................................................................................2311.0032.00----------------------------------------------------------------------------1.00--------
.............................................................ACGGACTGTGTGAGGAGAGGGCTG..................................................................................................2411.001.00------------------1.00------------------------------------------------------------------
.....................................................TGGAGCATACGGACTGTGTGAGGAGA........................................................................................................2611.001.00-------1.00-----------------------------------------------------------------------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGATGT.........................................................................................2511.0073.00-----1.00-------------------------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGATAAA........................................................................................2511.0075.001.00------------------------------------------------------------------------------------
.....................................................................TGTGAGGAGAGGGCTGGGCCGAA...........................................................................................231.000.00--------1.00----------------------------------------------------------------------------
.......................................................................TGAGGAGAGGGCTGGGCTGTTT..........................................................................................2211.001.001.00------------------------------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGAAG..........................................................................................2311.0075.00-----------------------------1.00-------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGAG...........................................................................................2211.0075.001.00------------------------------------------------------------------------------------
.......................................................................TGAGGAGAGGGCTGGGCTGATATT........................................................................................2411.0032.001.00------------------------------------------------------------------------------------
.......................................................................TGAGGAGAGGGCTGGGCTGATTT.........................................................................................2311.0032.001.00------------------------------------------------------------------------------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGAATAT........................................................................................2611.0073.001.00------------------------------------------------------------------------------------
.......................................................................TGAGGAGAGGGCTGGGCTGATAG.........................................................................................2311.0032.00--------------1.00----------------------------------------------------------------------
........................................AAGCGGAGAGGTGTGGAGCATAG........................................................................................................................231.000.00------------------------------------------------------------------------1.00------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGATTAT........................................................................................2611.0073.001.00------------------------------------------------------------------------------------
........................................AAGCGGAGAGGTGTGGAGCAT..........................................................................................................................2111.001.00----------------------------------------------------------------------------------1.00--
......................................................................GTGAGGAGAGGGCTGGGCTAAA...........................................................................................2211.004.00-------------------------------------------------------------------------------1.00-----
.....................................................................TGTGAGGAGAGGGCTGGGCTGTTTT.........................................................................................2511.003.001.00------------------------------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGAC...........................................................................................2211.001.00--------------------1.00----------------------------------------------------------------
.......................................................................TGAGGAGAGGGCTGGGCTGATAA.........................................................................................2311.0032.001.00------------------------------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTT.............................................................................................2011.004.001.00------------------------------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGATAA.........................................................................................2411.0075.00------1.00------------------------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGATTG.............................................................................................201.000.00-------------1.00-----------------------------------------------------------------------
..................................................GTGTGGAGCATACGGACTGTGTGAG............................................................................................................2511.001.00----------------1.00--------------------------------------------------------------------
..................................................GTGTGGAGCATACGGACTGTGTGAGGAA.........................................................................................................281.000.00-------1.00-----------------------------------------------------------------------------
.....................................................................TGTGAGGAGAGGGCTGGGCTGTAGT.........................................................................................2511.003.001.00------------------------------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGTAGA.........................................................................................2411.003.001.00------------------------------------------------------------------------------------
.......................................................................TGAGGAGAGGGCTGGGCTGAAAAT........................................................................................2411.0032.00--------------1.00----------------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGAAAC.........................................................................................2411.0075.00--------------------------------------------1.00----------------------------------------
.................................................................................................................GCCCCGCCTGCCTCCTCTAGT.................................................211.000.00-----------------------1.00-------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCTGTT...........................................................................................2211.003.001.00------------------------------------------------------------------------------------
.......................................................................TGAGGAGAGGGCTGGGCTGAAAA.........................................................................................2311.0032.00----------------------------------------------------------------1.00--------------------
.......................................................................TGAGGAGAGGGCTGGGCTGTTA..........................................................................................2211.001.001.00------------------------------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGG................................................................................................1730.670.67-0.67-----------------------------------------------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGC...............................................................................................1820.500.50------------------------------------------0.50------------------------------------------
......................................................................GTGAGGAGAGGGCTGGGCAT.............................................................................................2020.500.50----------------------------------------0.50--------------------------------------------
............................................................................AGAGGGCTGGGCTGACCA.........................................................................................1820.500.50-----------------------------------------0.50-------------------------------------------
.............................................................................................................................TCCTCTAGGCCGGG............................................1470.140.14------------0.14------------------------------------------------------------------------

Antisense strand
AAGGAGGCCTCGGCTGCAGAGGCAGAGATGCATTTTCTCTAAGCGGAGAGGTGTGGAGCATACGGACTGTGTGAGGAGAGGGCTGGGCTGACCAATGGGGATGCTGGGACTGAGCCCCGCCTGCCTCCTCTAGGCCGGGATTTCATGAGAGCTTCCCAGATGAACCTCAGCATGGCAGCCTGG
........................................................................((((((.((((.(((((..(((..........))).....))))).))))..)))))).....................................................
.................................................................66.................................................................133................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		mjTestesWT4()
Testes Data. (testes)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		mjTestesWT2()
Testes Data. (testes)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR553584(SRX182790)
source: Heart. (Heart)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR206940(GSM723281)
other. (brain)		SRR206941(GSM723282)
other. (brain)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR095855BC1(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR346415(SRX098256)
source: Testis. (Testes)		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR095855BC5(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR042481(GSM539873)
mouse pancreatic tissue [09-002]. (pancreas)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR553585(SRX182791)
source: Kidney. (Kidney)		GSM509276(GSM509276)
small RNA cloning by length. (testes)		SRR095855BC8(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR306536(GSM750579)
19-24nt. (ago2 brain)
...........................................................................................................................CCTCCTCTAGGCCGGGATTTCATGA................................... 2511.001.00-------1.00-----------------------------------------------------------------------------
..................................................................................................................CCCCGCCTGCCTCCTCTGG.................................................. 191.000.00----------------------------------------------1.00--------------------------------------
..........................................................................................................................................GATTTCATGAGAGCTTG............................ 171.000.00------------1.00------------------------------------------------------------------------
...............................................................................................................GAGCCCCGCCTGCCTCCTT..................................................... 191.000.00---------------------------1.00---------------------------------------------------------
..................................................................................................................................................GAGAGCTTCCCAGATGAACCTCAGCA........... 2611.001.00-----------------------------------------------------------------1.00-------------------
.................................................................................................................GCCCCGCCTGCCTCCGTCG................................................... 191.000.00---------------1.00---------------------------------------------------------------------
....................................................................................................................CCGCCTGCCTCCTCTCATC................................................ 191.000.00---------------1.00---------------------------------------------------------------------
.................................................................................................................GCCCCGCCTGCCTCCACCA................................................... 191.000.00---------------1.00---------------------------------------------------------------------
...................................................................................................................CCCGCCTGCCTCCTCTAG.................................................. 181.000.00---------------1.00---------------------------------------------------------------------
..................................................................................................................CCCCGCCTGCCTCCTTG.................................................... 171.000.00------------1.00------------------------------------------------------------------------
...................................................................................................................................AGGCCGGGATTTCATGAGAGCTTCCCA......................... 2711.001.00------------------------------------------------------------1.00------------------------
..................................................................................................................CCCCGCCTGCCTCCTGAGC.................................................. 191.000.00------------1.00------------------------------------------------------------------------