ID: uc008ijw.5
GENE: Rsu1(5)
chr2:13146003-13146252-


(2)
AGO1.ip 		(4)
AGO2.ip 		(9)
B-CELL 		(8)
BRAIN 		(2)
CELL-LINE 		(1)
DGCR8.mut 		(9)
EMBRYO 		(6)
ESC 		(5)
FIBROBLAST 		(2)
KIDNEY 		(6)
LIVER 		(2)
LUNG 		(4)
LYMPH 		(17)
OTHER 		(8)
OTHER.mut 		(1)
OVARY 		(1)
PANCREAS 		(2)
PIWI.mut 		(2)
SKIN 		(7)
SPLEEN 		(20)
TESTES 		(1)
THYMUS 		(1)
TOTAL-RNA 		(2)
UTERUS

Sense strand
TGCCAGGTAGTTTGATCTAATCAGACAAGAGGAAACACTTCCGTTCCACCTGGTCAAGAATTTTTAGCCATGAAAGTAAGAAAACCCACAAAATGCATGTGGACAGCACTGGGGTTTGACCTTACTTGCGTTCAATAGGGAAGTGTGTGGCTAGCATCCTTTGCCCCTTGAATTCACATGCTGCATCTCCATCCCTATAGCTGTGCCACCAAATGTAGCGGAACTGAAGAACTTGGAGGTACTAAACTTC
......................................................................................................................................(((((((((.(((..((..(((.....)))....((....))...))..)))))...)))))))....................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		mjTestesWT4()
Testes Data. (testes)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		mjTestesWT1()
Testes Data. (testes)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR525242(SRA056111/SRX170318)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		mjTestesWT3()
Testes Data. (testes)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR525240(SRA056111/SRX170316)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		mjLiverWT3()
Liver Data. (liver)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR037937(GSM510475)
293cand2. (cell line)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042479(GSM539871)
mouse liver tissue [09-002]. (liver)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR073955(GSM629281)
total RNA. (blood)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR073954(GSM629280)
total RNA. (blood)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR206941(GSM723282)
other. (brain)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		mjTestesWT2()
Testes Data. (testes)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
........................................................................................................................................................................................................................AGCGGAACTGAAGAACTTGGAGGT..........24196.0096.00-43.0011.0022.00--5.007.00----7.00-------------------------------------------------------------------------------1.00------------
.....................................................................................................................................AATAGGGAAGTGTGTGGCTAGCAT.............................................................................................24155.0055.0022.00--------2.00-3.00---1.001.00-4.00--------2.00----2.00----2.001.00-1.001.00---2.00-----2.00------1.00-------1.00-----------1.00---1.00-----1.00--1.00---1.00-1.00-----1.00-
.....................................................................................................................................AATAGGGAAGTGTGTGGCTAG................................................................................................21152.0052.0023.001.00-------1.00-4.00---2.001.00---4.00---------3.001.00-1.00----2.00----1.00-----1.001.00-----1.001.00-------------1.001.00-1.00--1.00---------------------------
.....................................................................................................................................AATAGGGAAGTGTGTGGCTAGC...............................................................................................22136.0036.0011.00--------5.006.001.00----2.00---------------1.00----1.00---1.002.00---2.00-----1.00--1.00--------------------1.00----------------1.00-----------
....................................................................................................................................................................................................................ATGTAGCGGAACTGAAGAACTTGGAGG...........27123.0023.00----15.007.00----------------1.00----------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGCGGAACTGAAGAACTT................18113.0013.00-1.006.00---4.001.00--------------------1.00----------------------------------------------------------------------------
.....................................................................................................................................AATAGGGAAGTGTGTGGCTAGCA..............................................................................................23112.0012.002.00--------------2.001.00----------1.00---2.00--1.00--------1.00----------------1.00-------------------1.00------------------------
.....................................................................................................................................................................................................................TGTAGCGGAACTGAAGAACTTGGAGGT..........27111.0011.00--------3.00-----2.00------1.001.00-------------2.00---------------------------1.00-------------------------1.00--------------
.....................................................................................................................................................................................................................TGTAGCGGAACTGAAGAACTTGGAGG...........2619.009.00--------3.00----------------1.001.00-1.002.00-----------------------------------------------------1.00---------------------
......................................................................................................................................................................................................................GTAGCGGAACTGAAGAACTT................2018.008.00-2.005.00---1.00--------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................TGTAGCGGAACTGAAG.....................1618.008.00-----8.00---------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................GCGGAACTGAAGAACTTGG..............1917.007.00-------------7.00-------------------------------------------------------------------------------------------
.....................................................................................................................................AATAGGGAAGTGTGTGGCTAGA...............................................................................................2216.0052.002.00--------------1.00-3.00---------------------------------------------------------------------------------------
.....................................................................................................................................AATAGGGAAGTGTGTGGCTAGT...............................................................................................2216.0052.001.00-----------------------3.00------------------------1.00-----------------------1.00-------------------------------
........................................................................................................................................................................................................................AGCGGAACTGAAGAACTTGGAGG...........2314.004.00-1.00-1.00-------------------------------------------------------------1.00---------------1.00-----------------------
..................................................................................................................................................................................TGCTGCATCTCCATCCCTATAGA.................................................233.000.00-----------------------------------2.00---------------------------------1.00-----------------------------------
.....................................................................................................................................AATAGGGAAGTGTGTGGCTAGCATT............................................................................................2513.0055.002.00--------------------------1.00-----------------------------------------------------------------------------
...........................................................................GTAAGAAAACCCACAGATG............................................................................................................................................................193.000.00-------------------3.00-------------------------------------------------------------------------------------
.....................................................................................................................................AATAGGGAAGTGTGTGGCTAT................................................................................................2113.002.001.00--------1.00-----------------------1.00-----------------------------------------------------------------------
...............................................................................................................................................................................ACATGCTGCATCTCCATCCCTATAGA.................................................263.000.00-------------------2.00---------------1.00---------------------------------------------------------------------
..................................................................................................................................................................................................................AAATGTAGCGGAACTGA.......................1712.002.00----------2.00----------------------------------------------------------------------------------------------
.....................................................................................................................................AATAGGGAAGTGTGTGGCTAA................................................................................................2112.002.00--------------------1.00--------------------------------------------------------------------1.00---------------
.................................................................................................................................................................................................................................GAAGAACTTGGAGGTACT.......1812.002.00-------1.00-------------------------------------------------------------------1.00-----------------------------
.....................................................................................................................................AATAGGGAAGTGTGTGGCTA.................................................................................................2012.002.001.00---------------------------------------------------1.00----------------------------------------------------
....................................................................................................................................................................................................................ATGTAGCGGAACTGAAGAACTTGGAGGTA.........2911.001.00--------1.00------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................TGTAGCGGAACTGAAGAACTTGGAGGA..........2711.009.00--------------1.00------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................AATGTAGCGGAACTGAAGAA...................2011.001.00-------------------------1.00-------------------------------------------------------------------------------
.....................................................................................................................................................................................................................TGTAGCGGAACTGAAGAACTTGGAGT...........261.000.00--------1.00------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................TGTAGCGGAACTGAAGAACTTGGAGGTACT.......3011.001.00----------------------1.00----------------------------------------------------------------------------------
.....................................................................................................................................AATAGGGAAGTGTGTGGCTAGCTT.............................................................................................2411.0036.001.00--------------------------------------------------------------------------------------------------------
.....................................................................................................................................AATAGGGAAGTGTGTGGCTAGCATCCTTTGCCCCTTGAATTCACATGCTGCATCTCCATCCCTATA...................................................6611.001.00--------------------------------------------------------------------------------------1.00------------------
.................................................................................................................................................................................ATGCTGCATCTCCATCCCTATAGAT................................................251.000.00----------------------------------------1.00----------------------------------------------------------------
......................................................................................................................................................................................................................GTAGCGGAACTGAAGAACTTGGA.............2311.001.00-------------------------1.00-------------------------------------------------------------------------------
..................................................................................................................................................................................................................AAATGTAGCGGAACTGAAG.....................1911.001.00--------------------------------------------1.00------------------------------------------------------------
.......................................................................................................................................................................................................................TAGCGGAACTGAAGAACTTGGAGGTACT.......2811.001.00--------------------------1.00------------------------------------------------------------------------------
.................................................................................................................................................................................................................................GAAGAACTTGGAGGTACTAAA....2111.001.00-----------------1.00---------------------------------------------------------------------------------------
.....................................................................................................................................AATAGGGAAGTGTGTGGCTATT...............................................................................................2211.002.00----------------1.00----------------------------------------------------------------------------------------
......................................................................................................................................................................................................................GTAGCGGAACTGAAGAAC..................1811.001.00-----------------------1.00---------------------------------------------------------------------------------
.....................................................................................................................................................................................................................TGTAGCGGAACTGAAGAACTTGGAGGTACTAAA....3311.001.00----------------------1.00----------------------------------------------------------------------------------
................................................................................................................................................................TTGCCCCTTGAATTCACAGCC.....................................................................211.000.00----------------------------------------------------------------------------------------------1.00----------
...................................................................................................................................................................................................................AATGTAGCGGAACTGAAGAACTTGGA.............2611.001.00--------1.00------------------------------------------------------------------------------------------------
.....................................................................................................................................AATAGGGAAGTGTGTGGCTAGCTG.............................................................................................2411.0036.001.00--------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................CGGAACTGAAGAACTTGGAGGTACTAAACTT.3111.001.00--------------------------------------------------------------------------------------------------1.00------
........................................................................................................................................AGGGAAGTGTGTGGCTAGCA..............................................................................................2011.001.00------------------------1.00--------------------------------------------------------------------------------
....................................................................................................................................................................................................................ATGTAGCGGAACTGAAGAAC..................2011.001.00---------------------1.00-----------------------------------------------------------------------------------
.......................................................................................................................................................................................................................TAGCGGAACTGAAGAACTTGGAGGT..........2511.001.00----------------------1.00----------------------------------------------------------------------------------
................................................................................................................................................................................................................CCAAATGTAGCGGAACTGAAGAACTTGGAGGTA.........3311.001.00------------------------------------------------1.00--------------------------------------------------------
........................................................................................................................................................................................................................AGCGGAACTGAAGAACTTGGAGGC..........2411.004.00-1.00-------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................AAGAACTTGGAGGTACTA......1811.001.00---------------------------------------------------------------------------------------1.00-----------------
..........................................................................................................................................................................................................................CGGAACTGAAGAACTTGGAGGT..........2211.001.00--1.00------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................TAGCGGAACTGAAGAACTTGGAGGTAA........271.000.00---------------------1.00-----------------------------------------------------------------------------------
.........................................................................................................................................................................................................................GCGGAACTGAAGAACTTGGAGGT..........2311.001.00-------1.00-------------------------------------------------------------------------------------------------
.....................................................................................................................................AATAGGGAAGTGTGTGGCTAGCAG.............................................................................................2411.0012.00--------------------------------------------------1.00------------------------------------------------------
.........................................................................................................................................................................................................................GCGGAACTGAAGAACTTGGAGGTACTAAAC...3011.001.00-------------------------------------------------------------1.00-------------------------------------------
....................................................................................................................................................................................................................ATGTAGCGGAACTGAAGAACTTGAAGG...........271.000.00----1.00----------------------------------------------------------------------------------------------------
.....................................................................................................................................AATAGGGAAGTGTGTGGCTAAT...............................................................................................2211.002.00---------------------------------------1.00-----------------------------------------------------------------
.....................................................................................................................................................................................................................TGTAGCGGAACTGAAGAACT.................2011.001.00------1.00--------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................TAGCGGAACTGAAGAACTTGGAGGTAC........2711.001.00--------------------------1.00------------------------------------------------------------------------------
.....................................................................................................................................AATAGGGAAGTGTGTGGCTAGTA..............................................................................................2311.0052.001.00--------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................ACTGAAGAACTTGGAGGTACTAAAA...251.000.00---------------------------------------1.00-----------------------------------------------------------------
....................................................................................................................................................................................CTGCATCTCCATCCCTATAG..................................................2011.001.00--------------------------------------------------------------1.00------------------------------------------
....................................................................................................GGACAGCACTGGGGTAACT...................................................................................................................................191.000.00------------------------------------------------------------------------------------------------------1.00--
...............TCTAATCAGACAAGAGGA.........................................................................................................................................................................................................................1811.001.00----------------------------------------------------------------------1.00----------------------------------
...............................................................................................................................................................................................................ACCAAATGTAGCGGAACTGAAG.....................2211.001.00----------------------------1.00----------------------------------------------------------------------------
......................................................................................................................................................................................................................GTAGCGGAACTGAAGAACTTGGAGGTACT.......2911.001.00------------------1.00--------------------------------------------------------------------------------------
.....................................................................................................................................AATAGGGAAGTGTGTGGCTAGCAA.............................................................................................2411.0012.00---------------------------------1.00-----------------------------------------------------------------------
.....................................................................................................................................................................................................................TGTAGCGGAACTGAAGAAC..................1911.001.00--------1.00------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................ACCAAATGTAGCGGAAC..........................1711.001.00-----------------------------------------------1.00---------------------------------------------------------
......................................................................................................................................................................................................................GTAGCGGAACTGAAGAACTTGG..............2211.001.00---------------------1.00-----------------------------------------------------------------------------------
.........................................................................................................................................................................................................................GCGGAACTGAAGAACTTGGAG............2111.001.00-------1.00-------------------------------------------------------------------------------------------------
...................................................................................................................................................................................GCTGCATCTCCATCCACC.....................................................181.000.00-------------------------------------------------------------------------------1.00-------------------------
.............................................................................................................................................................................................................................AACTGAAGAACTTGGAGGTACTAAA....2511.001.00-----------------------------------------------------------1.00---------------------------------------------
.....................................................................................................................................AATAGGGAAGTGTGTGGCTAGCATTA...........................................................................................2611.0055.001.00--------------------------------------------------------------------------------------------------------
.....................................................................................................................................AATAGGGAAGTGTGTGGCTAGCATA............................................................................................2511.0055.00------------------------------------------------1.00--------------------------------------------------------
.....................................................................................................................................AATAGGGAAGTGTGTGGCTAGAA..............................................................................................2311.0052.00-----------------1.00---------------------------------------------------------------------------------------
....................................................................................................................................................................................................................ATGTAGCGGAACTGAAGAACTTGGGGG...........2711.001.00----1.00----------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................ATGTAGCGGAACTGAAGAACTTGGA.............2511.001.00--------1.00------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................ATGTAGCGGAACTGAAGAACTTGGAG............2611.001.00-----------------------------------------------1.00---------------------------------------------------------
......................................................................................................................................................................................................................GTAGCGGAACTGAAGAACTTGGAGGTACTA......3011.001.00---------------------1.00-----------------------------------------------------------------------------------
........................................................................................................................................................AGCATCCTTTGCCCCATCT...............................................................................191.000.00---------------------------------------------------------------1.00-----------------------------------------
.............................................................................................................................................................................................................................AACTGAAGAACTTGGTGTG..........191.000.00------------------------------------------------------1.00--------------------------------------------------
.....................................................................................................................................................................................................................................AACTTGGAGGTACTAAAC...1811.001.00------------------------------------------------------------------------------------------------1.00--------
....................................................................................................................................................................................................................ATGTAGCGGAACTGAAGAACTTGG..............2411.001.00------------------------------------1.00--------------------------------------------------------------------
.........................................................................................................................................................................................................................GCGGAACTGAAGAACTTGGA.............2011.001.00-----------------------------1.00---------------------------------------------------------------------------
.........................................................................................................................................................................................................TGTGCCACCAAATGTAGCGGAACTGAAG.....................2811.001.00-------------------------------------------------------------------------------------1.00-------------------
.............................................................................................................................................................................................................................AACTGAAGAACTTGGAGG...........1811.001.00------------------------------------------------------------------------------------1.00--------------------
.............................................................................................................................................................................................................................AACTGAAGAACTTGGAGGTACTAAACT..2711.001.00---------------------------------------------------------------------------------------------------1.00-----
........................................................................................................................................................................................................................AGCGGAACTGAAGAACTTGGAGGTACT.......2711.001.00--------------------------------------------1.00------------------------------------------------------------
.....................................................................................................................................AATAGGGAAGTGTGTGGCTAGGGC.............................................................................................2411.0052.00----------------------------------------------------------------------------------------------------1.00----
......................................................................................................................................................................................................................GTAGCGGAACTGAAGAACTTGGAGG...........2511.001.00-----------------------------------------------------1.00---------------------------------------------------
...............................................................................................................................................................................................................................CTGAAGAACTTGGAGGTACTAAAC...2411.001.00----------1.00----------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................AAATGTAGCGGAACTGAAGAACTTGG..............2611.001.00-------------------------1.00-------------------------------------------------------------------------------
.....................................................................................................................................AATAGGGAAGTGTGTGG....................................................................................................1730.330.33-----------------------------------------------------0.33---------------------------------------------------
................................................................................................................................................................................................................................TGAAGAACTTGGAGGT..........1680.120.12------------------------------------------------------0.12--------------------------------------------------
..............................................................................................................................................................................................................................ACTGAAGAACTTGGAG............16100.100.10------0.10--------------------------------------------------------------------------------------------------

Antisense strand
TGCCAGGTAGTTTGATCTAATCAGACAAGAGGAAACACTTCCGTTCCACCTGGTCAAGAATTTTTAGCCATGAAAGTAAGAAAACCCACAAAATGCATGTGGACAGCACTGGGGTTTGACCTTACTTGCGTTCAATAGGGAAGTGTGTGGCTAGCATCCTTTGCCCCTTGAATTCACATGCTGCATCTCCATCCCTATAGCTGTGCCACCAAATGTAGCGGAACTGAAGAACTTGGAGGTACTAAACTTC
......................................................................................................................................(((((((((.(((..((..(((.....)))....((....))...))..)))))...)))))))....................................................
................................................................................................................................129....................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		mjTestesWT4()
Testes Data. (testes)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		mjTestesWT1()
Testes Data. (testes)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR525242(SRA056111/SRX170318)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		mjTestesWT3()
Testes Data. (testes)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR525240(SRA056111/SRX170316)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		mjLiverWT3()
Liver Data. (liver)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR037937(GSM510475)
293cand2. (cell line)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042479(GSM539871)
mouse liver tissue [09-002]. (liver)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		SRR073955(GSM629281)
total RNA. (blood)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR073954(GSM629280)
total RNA. (blood)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR206941(GSM723282)
other. (brain)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		mjTestesWT2()
Testes Data. (testes)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
...............................................................................GAAAACCCACAAAATGG.......................................................................................................................................................... 1711.000.00--------------3.00--------4.00--1.00-------2.00--------------------------------1.00-------------------------------------
.....................................................................................................................................................................................TGCATCTCCATCCCTATAG.................................................. 1911.001.00---------------------------------------1.00-----------------------------------------------------------------
................................................................................AAAACCCACAAAATGAGGA....................................................................................................................................................... 191.000.00--------------1.00------------------------------------------------------------------------------------------
...............................................................................GAAAACCCACAAAATGGT......................................................................................................................................................... 181.000.00-----------------------------------------------------------------------------------------------------1.00---
...............................................................................................................................................................................................................................CTGAAGAACTTGGAGGAAG........ 191.000.00--------------------------------------------------------------------1.00------------------------------------
..............................................................................................................................................................................................ATCCCTATAGCTGTGC............................................ 1630.330.33--------------------------------------------------------------------------------------------------------0.33