ID: uc008hsm.0
GENE: Gbf1
chr19:46237810-46238059+


(1)
AGO.mut
(1)
AGO1.ip
(11)
AGO2.ip
(1)
AGO3.ip
(5)
B-CELL
(19)
BRAIN
(3)
CELL-LINE
(1)
DCR.mut
(1)
DGCR8.mut
(9)
EMBRYO
(9)
ESC
(1)
FIBROBLAST
(1)
HEART
(1)
KIDNEY
(7)
LIVER
(1)
LYMPH
(11)
OTHER
(3)
OTHER.mut
(1)
OVARY
(2)
PANCREAS
(7)
PIWI.ip
(1)
PIWI.mut
(3)
SKIN
(4)
SPLEEN
(24)
TESTES
(1)
THYMUS
(4)
TOTAL-RNA

Sense strand
AGCCTTTAATCCCGGCACTTGGGATGGATCTCTGAGTTTGAGGCCAACCTGGTCTACAGAGTGAGTTCTAAGACAACCAGGGCTGCACACAGAGGAAACCCTGTTTCAAAATGAAACCAATCAACCAATCAACCAACCAACCAAACAGCTGTGAAAAGGAAAAATATTAACCAATCTTTTCTCTTCAACTGTTCTGGTAGGTTTGTCAGGATGGTGGATAAGAATATTTACATCATTCAAGGAGAAATTA
...........................................................................................................................................(((((((((...((((.((((((.((........)).)))))).)))).))))).))))....................................................
.....................................................................................................................................134...............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR037925(GSM510463)
e9p5_rep3. (embryo)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
GSM475281(GSM475281)
total RNA. (testes)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
SRR553585(SRX182791)
source: Kidney. (Kidney)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR306538(GSM750581)
19-24nt. (ago2 brain)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR073955(GSM629281)
total RNA. (blood)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
mjTestesWT2()
Testes Data. (testes)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR037906(GSM510442)
brain_rep3. (brain)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
SRR051940(GSM545784)
18-32 nt total small RNAs (Mov10l+/-). (testes)
SRR306539(GSM750582)
19-24nt. (ago2 brain)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
GSM510453(GSM510453)
newborn_rep9. (total RNA)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR042485(GSM539877)
mouse testicular tissue [09-002]. (testes)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
GSM510450(GSM510450)
newborn_rep6. (total RNA)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
mjLiverWT3()
Liver Data. (liver)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR206942(GSM723283)
other. (brain)
SRR037898(GSM510434)
ovary_rep3. (ovary)
GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR059772(GSM562834)
CD4_Drosha. (spleen)
SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR553584(SRX182790)
source: Heart. (Heart)
SRR059765(GSM562827)
DN3_control. (thymus)
mjTestesWT3()
Testes Data. (testes)
GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
GSM510455(GSM510455)
newborn_rep11. (total RNA)
..........................................................................................................................................AACCAAACAGCTGTGAAAAGGA..........................................................................................22139.0039.00-1.00--2.001.00-1.003.00--2.00--4.002.00----1.00-3.00---1.001.00------------2.00--2.00-1.00-2.00-1.00--------1.001.00---------------1.00----1.00---1.00-------1.00------1.00-1.00--1.00-
..................................................................................................................................................................................TTCTCTTCAACTGTTCTGGTAG..................................................22115.0015.00-4.00-------1.00-----1.00---------1.00-1.00--1.00--2.00------------1.00-----1.00---1.00-------------------------------------------1.00-----
..........................................................................................................................................AACCAAACAGCTGTGAAAAGG...........................................................................................21114.0014.00-1.001.00-----2.001.00--2.00--1.001.00---------1.00-----2.00---------------------------------------------1.00------------1.00--------------
..................................................................................................................................................................................TTCTCTTCAACTGTTCTGGTAGT.................................................23111.0015.00------------2.00-------2.00-------------1.00-------1.00--------1.00---1.00---------1.00-------------1.00-----------------------1.00--
.................................................................................................................................................................................TTTCTCTTCAACTGTTCTGGTAG..................................................2317.007.00-2.00-------2.00-------------2.00-------------1.00--------------------------------------------------------------------
..................................................................................................................................................................................TTCTCTTCAACTGTTCTGGTAT..................................................2216.001.00------1.00-----------------3.00---------------------1.00---------------------------------------------------1.00-------
.................................................................................................................................................................................................................................ATTTACATCATTCAAGGAGAAATT.2415.005.00---1.00------3.00------------------------------------------------------------------1.00----------------------------
.................................................................................................................................................................................TTTCTCTTCAACTGTTCTGGTAT..................................................235.000.00------3.00------------------------------1.00-------------------1.00------------------------------------------------
..........................................................................................................................................AACCAAACAGCTGTGAAAAGGAA.........................................................................................2315.005.00------------------4.00------------------------------1.00--------------------------------------------------------
..........................................................................................................................................AACCAAACAGCTGTGAAAAGGAAA........................................................................................2415.005.00-------------------------1.00------------------------2.00-----------1.00-----1.00-------------------------------------
.....................................................................................................................................................................................................................................ACATCATTCAAGGAGAAAT..1914.004.00-------4.00--------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TTCTCTTCAACTGTTCTGGTAGA.................................................2314.0015.00-1.001.00----------------------1.00----------------------------1.00---------------------------------------------------
......................................................................................................................................................................................................AGGTTTGTCAGGATGGTGGAT...............................2113.003.00----2.001.00----------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................ACATCATTCAAGGAGAAATT.2013.003.00---1.00-1.00-----------------------------------------------------------------------------------------1.00----------
.........................................................................................................................................................................................................TTTGTCAGGATGGTGGATAAGAA..........................2313.003.00---2.00------------------------------------------------------------------------1.00-----------------------------
...................................................................................................................................................................................TCTCTTCAACTGTTCTGGTAGT.................................................2213.001.00------------------------------1.00-----1.00--------------------------------1.00------------------------------------
..............................TCTGAGTTTGAGGCCAACCTGGTCA...................................................................................................................................................................................................253.000.00--1.00----------1.00-----------------------------------------------------1.00--------------------------------------
..................................................................................................................................................................................TTCTCTTCAACTGTTCTGGTATT.................................................2312.001.00----------------------------------1.00------------------------------------------------------1.00----------------
......................................................TACAGAGTGAGTTCTTTAG.................................................................................................................................................................................192.000.00---------------------------------------2.00------------------------------------------------------------------
..........................................................................................................................................................................................................TTGTCAGGATGGTGGATAAGAAT.........................2312.002.00----1.001.00----------------------------------------------------------------------------------------------------
...................................................................................................................................................................................TCTCTTCAACTGTTCTGGTATT.................................................222.000.00---------------------1.00-----------------------------------------1.00------------------------------------------
......................................................................................................................................................................................................AGGTTTGTCAGGATGG....................................1621.501.50--------------------------------------------------------------------------------------1.00------------------0.50
.........................................................................................................................................................................................................TTTGTCAGGATGGTGGATAAGAATA........................2511.001.00---1.00------------------------------------------------------------------------------------------------------
..........................................................................................................................................AACCAAACAGCTGTGAAAATGA..........................................................................................221.000.00-----------------------------1.00----------------------------------------------------------------------------
......................................................................................................................................................................................................AGGTTTGTCAGGATGGT...................................1711.001.00------1.00---------------------------------------------------------------------------------------------------
............................TCTCTGAGTTTGAGGG..............................................................................................................................................................................................................161.000.00-------------------------------------------------------------------------------------1.00--------------------
...............................CTGAGTTTGAGGCCAACCTGGTCTGTAG...............................................................................................................................................................................................281.000.00--1.00-------------------------------------------------------------------------------------------------------
.........................................................................................CAGAGGAAACCCTGTTTCGT.............................................................................................................................................201.000.00-------------------------------------------------------------------------1.00--------------------------------
.................................................................................................................................................................................................................................ATTTACATCATTCAAGGAGAA....2111.001.00-----1.00----------------------------------------------------------------------------------------------------
..............................TCTGAGTTTGAGGCCAACCTGGTCTACCG...............................................................................................................................................................................................291.000.00--------------------------------------1.00-------------------------------------------------------------------
......................................................................................................................................................................................................AGGTTTGTCAGGATGGTGGATAA.............................2311.001.00-----------------------------1.00----------------------------------------------------------------------------
..............................TCTGAGTTTGAGGCCAACCTGGTCAA..................................................................................................................................................................................................261.000.00-------------1.00--------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTTCTCTTCAACTGTTCTGTTAG..................................................231.000.00------------------------------------------------------------------1.00---------------------------------------
..........................................................................................................................................AACCAAACAGCTGTGAAAAG............................................................................................2011.001.00------------------------------------------1.00---------------------------------------------------------------
...................................................................................................................................................................................TCTCTTCAACTGTTCTGGTAG..................................................2111.001.00----------------------------------------------------------------------------------1.00-----------------------
............................................................................................................................................................................................................GTCAGGATGGTGGATAAGAATATT......................2411.001.00-----------1.00----------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................CAGGATGGTGGATAAGAAT.........................1911.001.00----1.00-----------------------------------------------------------------------------------------------------
...........................................................................................................................................ACCAAACAGCTGTGAAAAGGA..........................................................................................2111.001.00-------------------------------------------------------------------------------------------------1.00--------
.......................................................................................................................................................................................................................................ATCATTCAAGGAGAAATT.1811.001.00-----1.00----------------------------------------------------------------------------------------------------
..............................................ACCTGGTCTACAGAGTGAGTTCTAAGACATT.............................................................................................................................................................................311.000.00-----------------------------------------------------1.00----------------------------------------------------
......................................................................................................................................................................................................AGGTTTGTCAGGATGGTGGATA..............................2211.001.00----------------------------1.00-----------------------------------------------------------------------------
.......................ATGGATCTCTGAGTTTGAGGCCAAGT.........................................................................................................................................................................................................261.000.00-------------------1.00--------------------------------------------------------------------------------------
..................................................................................................................................................................................TTCTCTTCAACTGTTCTGGTAA..................................................2211.001.00------1.00---------------------------------------------------------------------------------------------------
..............................TCTGAGTTTGAGGCCAACCTGGTCGAT.................................................................................................................................................................................................271.000.00---------------------1.00------------------------------------------------------------------------------------
.................................................................................................................................................................................TTTCTCTTCAACTGTTCTGGT....................................................2111.001.00---------------------------------------------1.00------------------------------------------------------------
..CCTTTAATCCCGGCACTTGGAT..................................................................................................................................................................................................................................221.000.00------------------------------------------------------------------------------------------------1.00---------
..................................................................................................................................................................................TTCTCTTCAACTGTTCTGGTA...................................................2111.001.00---------------------------------------------------------------------------------------1.00------------------
..CCTTTAATCCCGGCACTTGCA...................................................................................................................................................................................................................................211.000.00-----------------------------------------------------------------------1.00----------------------------------
..............................TCTGAGTTTGAGGCCAACCTGGTCAATT................................................................................................................................................................................................281.000.00--1.00-------------------------------------------------------------------------------------------------------
..........................................................................................................................................AACCAAACAGCTGTGAAAATG...........................................................................................211.000.00-----------1.00----------------------------------------------------------------------------------------------
............................................................................................................................................................................................................GTCAGGATGGTGGATCAC............................181.000.00-------------------------------------------------------------1.00--------------------------------------------
...........................................................................................................................................................................................................TGTCAGGATGGTGGATAAGATTT........................231.000.00-----------------------------------------1.00----------------------------------------------------------------
....................................................................................................................................................................................CTCTTCAACTGTTCTGGTAG..................................................2011.001.00----------------------------1.00-----------------------------------------------------------------------------
................................TGAGTTTGAGGCCAACCTGGTCTACCGAG.............................................................................................................................................................................................291.000.00--------------------------------------1.00-------------------------------------------------------------------
.......................................................................................................................................................................................................GGTTTGTCAGGATGGTGGA................................1911.001.00-----------------------1.00----------------------------------------------------------------------------------
..................................................................................................................................................................................TTCTCTTCAACTGTTCTGGTGGT.................................................231.000.00----------------------------------------------------------------------------------------1.00-----------------
..................................................................................................................................................................................................................ATGGTGGATAAGAATTAA......................181.000.00------------------------------------------------------------1.00---------------------------------------------
.........................................................................................................................................................................................................TTTGTCAGGATGGTGGATAAGAAT.........................2411.001.00---1.00------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................TGTCAGGATGGTGGATAAGAATATT......................2511.001.00-------------1.00--------------------------------------------------------------------------------------------
............................................................................................................................................................................................................GTCAGGATGGTGGATAAGATTT........................221.000.00-----------------------------------------1.00----------------------------------------------------------------
............................................................................................AGGAAACCCTGTTTCTGCT...........................................................................................................................................191.000.00----------------------------------------------------------------------1.00-----------------------------------
.............................................AACCTGGTCTACAGAGTGAGTTAA.....................................................................................................................................................................................241.000.00---------------------------------------------------------------------------------------------1.00------------
...............................................................AGTTCTAAGACAACCAGGGCTG.....................................................................................................................................................................2250.200.20----0.20-----------------------------------------------------------------------------------------------------

Antisense strand
AGCCTTTAATCCCGGCACTTGGGATGGATCTCTGAGTTTGAGGCCAACCTGGTCTACAGAGTGAGTTCTAAGACAACCAGGGCTGCACACAGAGGAAACCCTGTTTCAAAATGAAACCAATCAACCAATCAACCAACCAACCAAACAGCTGTGAAAAGGAAAAATATTAACCAATCTTTTCTCTTCAACTGTTCTGGTAGGTTTGTCAGGATGGTGGATAAGAATATTTACATCATTCAAGGAGAAATTA
...........................................................................................................................................(((((((((...((((.((((((.((........)).)))))).)))).))))).))))....................................................
.....................................................................................................................................134...............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR037925(GSM510463)
e9p5_rep3. (embryo)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
GSM475281(GSM475281)
total RNA. (testes)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
SRR553585(SRX182791)
source: Kidney. (Kidney)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR014233(GSM319957)
16.5 dpc MIWI2. (miwi2 testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR306538(GSM750581)
19-24nt. (ago2 brain)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR073955(GSM629281)
total RNA. (blood)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
mjTestesWT2()
Testes Data. (testes)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR037906(GSM510442)
brain_rep3. (brain)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
SRR363957(GSM822759)
P20-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
SRR051940(GSM545784)
18-32 nt total small RNAs (Mov10l+/-). (testes)
SRR306539(GSM750582)
19-24nt. (ago2 brain)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
GSM510453(GSM510453)
newborn_rep9. (total RNA)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR042485(GSM539877)
mouse testicular tissue [09-002]. (testes)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
GSM510450(GSM510450)
newborn_rep6. (total RNA)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
mjLiverWT3()
Liver Data. (liver)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR206942(GSM723283)
other. (brain)
SRR037898(GSM510434)
ovary_rep3. (ovary)
GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR059772(GSM562834)
CD4_Drosha. (spleen)
SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR553584(SRX182790)
source: Heart. (Heart)
SRR059765(GSM562827)
DN3_control. (thymus)
mjTestesWT3()
Testes Data. (testes)
GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
GSM510455(GSM510455)
newborn_rep11. (total RNA)
.....................................TTGAGGCCAACCTGGTCTACAGAGTGATA........................................................................................................................................................................................ 295.000.001.00----------------2.00-----------------1.00------------------------------------------------------------------1.00---
........................................AGGCCAACCTGGTCTACAGAGTGAATT....................................................................................................................................................................................... 275.000.00-------------------1.00-----------2.00----1.00-------1.00-------------------------------------------------------------
..........................................GCCAACCTGGTCTACAGAGTGAATA....................................................................................................................................................................................... 253.000.002.00-1.00-------------------------------------------------------------------------------------------------------
........................................AGGCCAACCTGGTCTACAGAGTGAAGCA...................................................................................................................................................................................... 282.000.00-----------------1.00-----------------1.00----------------------------------------------------------------------
......................................TGAGGCCAACCTGGTCTACAGAGTGAGCC....................................................................................................................................................................................... 291.000.001.00---------------------------------------------------------------------------------------------------------
......................................TGAGGCCAACCTGGTCTACAGAGTGATT........................................................................................................................................................................................ 281.000.001.00---------------------------------------------------------------------------------------------------------
..................................................................................................................AACCAATCAACCAATATGA..................................................................................................................... 191.000.00-------1.00--------------------------------------------------------------------------------------------------
.............................................................................................................................CAATCAACCAACCAACCATT......................................................................................................... 201.000.00---------1.00------------------------------------------------------------------------------------------------
.........................................GGCCAACCTGGTCTACAGAGTGAAAA....................................................................................................................................................................................... 261.000.001.00---------------------------------------------------------------------------------------------------------
..........................................GCCAACCTGGTCTACAGAGAA........................................................................................................................................................................................... 211.000.00-----------------------------------------------------------------------------------1.00----------------------
.....................................TTGAGGCCAACCTGGTCTACAGAGTGATAA....................................................................................................................................................................................... 301.000.00------------------------------------------------1.00---------------------------------------------------------
.....................................TTGAGGCCAACCTGGTCTACAGAGTGATTTT...................................................................................................................................................................................... 311.000.00-------------1.00--------------------------------------------------------------------------------------------
.............................................................................................................................CAATCAACCAACCAACCCC.......................................................................................................... 191.000.00------------------------------------------------------------------------------------------1.00---------------
.............................................AACCTGGTCTACAGAGTGATTAT...................................................................................................................................................................................... 231.000.00--1.00-------------------------------------------------------------------------------------------------------
.................................GAGTTTGAGGCCAACCTGGTCTACAGAGTTT.......................................................................................................................................................................................... 311.000.00------------------------------------------------------------------------1.00---------------------------------
.............................................AACCTGGTCTACAGAGTAGC......................................................................................................................................................................................... 201.000.00----------------------------------------------------------------------------------------------1.00-----------
............................................................................................................................CCAATCAACCAACCAAGAC........................................................................................................... 191.000.00---------------------------------------------------------------------------------1.00------------------------
................................................CTGGTCTACAGAGTGAGTTCTACATT................................................................................................................................................................................ 261.000.00-------------------1.00--------------------------------------------------------------------------------------
..................................................GGTCTACAGAGTGAGTTCTGGGC................................................................................................................................................................................. 231.000.00----------------1.00-----------------------------------------------------------------------------------------
..........................................GCCAACCTGGTCTACAGAGTGAAA........................................................................................................................................................................................ 241.000.001.00---------------------------------------------------------------------------------------------------------
................................................CTGGTCTACAGAGTGAGTTCTACATA................................................................................................................................................................................ 261.000.00----------------------------------------------------------------1.00-----------------------------------------
........................................AGGCCAACCTGGTCTACAGAGTGAAAAT...................................................................................................................................................................................... 281.000.001.00---------------------------------------------------------------------------------------------------------
.............................................AACCTGGTCTACAGAGTGATAGT...................................................................................................................................................................................... 231.000.00--1.00-------------------------------------------------------------------------------------------------------
.........................................GGCCAACCTGGTCTACAGAGTGAATTA...................................................................................................................................................................................... 271.000.001.00---------------------------------------------------------------------------------------------------------
.........................................GGCCAACCTGGTCTACAGAGTGATTT....................................................................................................................................................................................... 261.000.001.00---------------------------------------------------------------------------------------------------------
........................................AGGCCAACCTGGTCTACAGAGTGAATC....................................................................................................................................................................................... 271.000.001.00---------------------------------------------------------------------------------------------------------
.............................................AACCTGGTCTACAGAGTGAGTTCTATTT................................................................................................................................................................................. 281.000.00-------------------1.00--------------------------------------------------------------------------------------
.....................................TTGAGGCCAACCTGGTCTACTA............................................................................................................................................................................................... 221.000.00---1.00------------------------------------------------------------------------------------------------------
.........................................GGCCAACCTGGTCTACAGAGTGAGA........................................................................................................................................................................................ 251.000.00--------------------------------------------1.00-------------------------------------------------------------
........................................AGGCCAACCTGGTCTACAGAGTGAAAAG...................................................................................................................................................................................... 281.000.00------------------------------------------------1.00---------------------------------------------------------
.............................................AACCTGGTCTACAGAGTGAGTTAT..................................................................................................................................................................................... 241.000.00--------------------------------------------------------------------------1.00-------------------------------
.............................................AACCTGGTCTACAGAGTGAAGC....................................................................................................................................................................................... 221.000.00----------------1.00-----------------------------------------------------------------------------------------
.....................................................................................................................CAATCAACCAATCAACCAACCAAC............................................................................................................. 241.000.00----------1.00-----------------------------------------------------------------------------------------------
................................................CTGGTCTACAGAGTGAGTTCTC.................................................................................................................................................................................... 221.000.00----------------1.00-----------------------------------------------------------------------------------------
.........................................GGCCAACCTGGTCTACAGAGTGAATC....................................................................................................................................................................................... 261.000.001.00---------------------------------------------------------------------------------------------------------
..........................................GCCAACCTGGTCTACAGAGTGAGGC....................................................................................................................................................................................... 251.000.00---------------------1.00------------------------------------------------------------------------------------
............................................CAACCTGGTCTACAGAGTGACCAG...................................................................................................................................................................................... 241.000.00-----------------1.00----------------------------------------------------------------------------------------
........................................................................................ACAGAGGAAACCCTGTTTCAA............................................................................................................................................. 2160.170.17----------0.17-----------------------------------------------------------------------------------------------