ID: uc008gjq.15
GENE: Plcb3(15)
chr19:7034658-7034831-


(1)
AGO.mut 		(2)
AGO1.ip 		(2)
AGO2.ip 		(2)
AGO3.ip 		(7)
B-CELL 		(5)
BRAIN 		(8)
CELL-LINE 		(1)
DGCR8.mut 		(9)
EMBRYO 		(11)
ESC 		(7)
FIBROBLAST 		(1)
KIDNEY 		(4)
LIVER 		(3)
LYMPH 		(18)
OTHER 		(1)
OTHER.ip 		(11)
OTHER.mut 		(1)
OVARY 		(7)
PIWI.ip 		(4)
PIWI.mut 		(5)
SKIN 		(8)
SPLEEN 		(1)
TDRD1.ip 		(37)
TESTES 		(2)
THYMUS 		(1)
TOTAL-RNA 		(1)
UTERUS

Sense strand
CGTCAACTACGTTGAGCCCGTCAAGTTCAAGTCCTTCGAGGCTGCTCGAAGTGAGTGGGGATGGGTGACTGGGAGCTGGCCCTGCCAGGCCTTGGCTGCTCTTACATCCCTCCTCCTCCCCCAGAAAGGAACAAGTGCTTCGAGATGTCATCCTTCGTGGAGACCAAGGCAATG
....................................................(((.(((((.(((((...(((((((((((......))))..)))).)))...))))).))))))))........................................................
..................................................51.......................................................................124................................................
SizePerfect hitTotal NormPerfect NormSRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		mjTestesWT4()
Testes Data. (testes)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		mjTestesWT3()
Testes Data. (testes)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR037937(GSM510475)
293cand2. (cell line)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR014236(GSM319960)
10 dpp total. (testes)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		mjLiverWT1()
Liver Data. (liver)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR023847(GSM307156)
mESv6.5smallrna_rep1. (cell line)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		mjTestesWT2()
Testes Data. (testes)		mjTestesWT1()
Testes Data. (testes)		SRR059771(GSM562833)
CD4_control. (spleen)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		GSM314559(GSM314559)
ESC dgcr8 (454). (ESC)		SRR059776(GSM562838)
MEF_Dicer. (MEF)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR037906(GSM510442)
brain_rep3. (brain)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		GSM416732(GSM416732)
MEF. (cell line)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR553603(SRX182809)
source: Spermatids. (Spermatids)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR014229(GSM319953)
10 dpp MILI. (mili testes)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR037928(GSM510466)
e7p5_rep2. (embryo)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
..................................................GTGAGTGGGGATGGGTGACTGGGAGC..................................................................................................26191.0091.0026.0015.0011.00---4.005.004.00-3.005.002.00-2.00--1.00-2.001.00-2.001.00------1.002.00-----1.001.00-1.00-----------------1.00---------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAG...................................................................................................25171.0071.0019.007.0014.00---3.001.004.00-2.00--4.002.00--1.00--1.00-1.002.001.00--1.00-----1.00-1.00-1.00--1.00----1.00------------1.00-------2.00-------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGGAGC..................................................................................................25161.0061.00-2.007.001.001.0011.00-2.004.006.002.00---1.004.00----1.00---1.00-----1.001.00---1.00-1.00--1.00-3.00-----1.00----------3.00--2.00---------------------------1.00----------------1.00----1.00------------1.00--
..................................................GTGAGTGGGGATGGGTGACTGGGA....................................................................................................24146.0046.003.005.0010.00---4.002.00----1.00--1.00-1.00-1.001.00-2.00-1.00--------2.00---1.00--1.00--1.001.00--1.00-2.00----3.00-1.00-----------------------------------------------------1.00-----------------
..................................................GTGAGTGGGGATGGGTGACTGGGAGT..................................................................................................26128.0071.0011.001.00-----3.00----2.002.00--------1.001.001.00--2.00-----1.00-1.00-----------------------------------1.00----------1.00---------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCCT.....................................................22122.0011.00---3.004.001.00-------------------1.003.00-----1.00---------------2.00-----------3.00--------2.00------------------------1.00----------------1.00----------------
...................................................................................................TCTTACATCCCTCCTCCTCCCC.....................................................22122.0022.00---8.003.001.00---------------2.00----3.00------------1.00--------------------------------------2.00-1.00------------------1.00----------------------------
...................................................TGAGTGGGGATGGGTGACTGGGAG...................................................................................................24121.0021.002.001.00----1.001.00--1.00--1.00-1.00-1.00-1.001.00------1.00--1.00-1.00---1.00--------1.001.00----1.00----------------------1.00-----------------------------1.00--------------1.00--------
...................................................TGAGTGGGGATGGGTGACTGGGA....................................................................................................23117.0017.00-1.001.00-1.001.00----1.00---1.00-----1.00----1.00----1.00-------------3.00-------2.00-------------------1.00-------------------------1.00----------------------1.00------
...................................................TGAGTGGGGATGGGTGACTGG......................................................................................................21115.0015.00-1.00--2.00-------2.00------1.00-----2.00----------1.00--3.00-----1.00-------------------------------------------------1.00-----1.00--------------------------
...................................................TGAGTGGGGATGGGTGACTGGG.....................................................................................................22111.0011.00-1.001.00------------1.00---1.00--1.00--------1.00---------------1.00--------2.00--------2.00--------------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCC......................................................21111.0011.00---5.001.001.00---------------1.00-------------------1.00-----------------------------------1.00----------1.00---------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGG......................................................................................................22110.0010.00-3.001.001.00--------1.00----1.00--1.00------------1.00----------------------------------1.00-----------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCCTA....................................................23110.0011.00-----1.00-----8.00---1.00----------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAGA..................................................................................................26110.0071.005.001.00----1.00---1.00--------1.00-----------1.00------------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGG.....................................................................................................2319.009.00-5.001.00----1.00-----------------------------1.001.00-----------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAA...................................................................................................2518.0046.003.00-1.00---1.00------1.00-------------1.00-1.00--------------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAGCTGTTT.............................................................................................3117.001.00--------7.00-----------------------------------------------------------------------------------------------------------------------
......................................................GTGGGGATGGGTGACTGGGA....................................................................................................2017.007.00---------7.00----------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACT........................................................................................................2016.006.00----------------1.001.00-----------1.00--------------------------------------------------------1.00------1.00-------------------1.00--------------
.....................................................................................................TTACATCCCTCCTCCTCCCCC....................................................2116.006.00---1.004.00----------------1.00----------------------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAT...................................................................................................2516.0046.001.00------4.00----------------1.00-------------------------------------------------------------------------------------------------------
.......................................................................................................................CCCAGAAAGGAACAAGTCA....................................196.000.00------------------6.00-------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAAA..................................................................................................2616.0046.002.001.00--------1.00--------1.00-----------------------------1.00------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAGCT.................................................................................................2715.005.00------1.00---1.00---3.00-----------------------------------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGGAGT..................................................................................................2515.0021.00-1.00-----1.00-----1.00-----------------------------------------1.00-------1.00----------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGAGA...................................................................................................2414.0015.00---------4.00----------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTG.......................................................................................................2114.004.00-1.00---------------1.00--1.00--------1.00--------------------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACT........................................................................................................1914.004.00----------------2.00--------------------------1.00----------------------------------------------------------------------1.00-------------
..................................................GTGAGTGGGGATGGGTGACTGGGAAAA.................................................................................................2714.0046.001.00-----------3.00-------------------------------------------------------------------------------------------------------------------
.....................................................................................................TTACATCCCTCCTCCTCCCCCAAA.................................................2413.003.00-------------------------------------------------------------3.00------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGAC.........................................................................................................1913.003.00-----------------------------1.00---------------------------------1.00----------------------------------------------------1.00-----------
...................................................TGAGTGGGGATGGGTGACTGGA.....................................................................................................2213.0015.00----------------1.00--------1.00-------------------------------------------------------------------------------------------------1.00----
...................................................................................................TCTTACATCCCTCCTCCTCCTT.....................................................2213.003.00-----1.00---------------------------------------------------------------------1.00--------------------------------1.00-------------------
...................................................................................................TCTTACATCCCTCCTCCTCC.......................................................2013.003.00---2.00-------------------------------------------------------------------------------------1.00--------------------------------------
...............................................................................................CTGCTCTTACATCCCTCCTCCTC........................................................2313.003.00----2.00-1.00-------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TTACATCCCTCCTCCTCCCCCA...................................................2213.003.00---3.00----------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGGAGA..................................................................................................2513.0021.00----------1.00---2.00-----------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAGAA.................................................................................................2713.0071.002.001.00------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TTACATCCCTCCTCCTCCCC.....................................................2013.003.00----2.00-------------------------------------------1.00-------------------------------------------------------------------------------
.......................................................................................GGCCTTGGCTGCTCTTCGGG...................................................................202.000.00---------------------------------------------------------------------------------1.00------------------------------------1.00---------
..................................................GTGAGTGGGGATGGGTGACTGGGAGCTGGCCC............................................................................................3212.002.00-----------------2.00--------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAGCTGGCCCTGCCAGGCCTTGGCTGCTCTTACATCCCTCCTCCTCCCCCAGTTTT..............................................782.000.00----------------------------2.00---------------------------------------------------------------------------------------------------
....................................................GAGTGGGGATGGGTGACTGA......................................................................................................202.000.00-------------------------------------------------------------------2.00------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGA......................................................................................................2112.001.00---1.00---------------------------------------1.00------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACA........................................................................................................192.000.00----------------------------------2.00---------------------------------------------------------------------------------------------
..........................................................GGATGGGTGACTGGGAGCTGG...............................................................................................2112.002.00--------------------------------1.00-------------1.00---------------------------------------------------------------------------------
....................................................GAGTGGGGATGGGTGACTGGGAAT..................................................................................................2412.001.00----------------------------------------------------------------------------2.00---------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCCAAT...................................................2412.0011.00---2.00----------------------------------------------------------------------------------------------------------------------------
..........................................................GGATGGGTGACTGGGAGCTGGCA.............................................................................................2312.002.00----------------1.00-----------------------------------------------1.00---------------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCCCATAT.................................................2612.0022.00---2.00----------------------------------------------------------------------------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCCTAAA..................................................2512.0011.00-----------------------------------------1.00-------------------------------------------------------------------1.00------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAGTA.................................................................................................2712.0071.001.001.00------------------------------------------------------------------------------------------------------------------------------
..........................................................GGATGGGTGACTGGGAGCTGGC..............................................................................................2212.002.00----------------------------------------------1.00----1.00----------------------------------------------------------------------------
.........................................................GGGATGGGTGACTGGGAGCTG................................................................................................2112.002.00--------------------------------------------------2.00-----------------------------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCCCAAT..................................................2512.0022.00----1.00----------------------------------------------------------------------------1.00----------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGAAAA..................................................................................................2512.0015.00------------2.00-------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGGAT...................................................................................................2412.0017.00----------------1.00--------------------------------------1.00------------------------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCCCA....................................................2312.0022.00---1.001.00---------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGAA....................................................................................................2312.0015.00-----1.00-----------------------------------------1.00--------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGA.....................................................................................................2312.0010.00--2.00-----------------------------------------------------------------------------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCCA.....................................................2212.0011.00------------------------------------------------------------------------1.00----1.00--------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGATT..................................................................................................2612.0046.00-------------1.00-----------------1.00------------------------------------------------------------------------------------------------
................................................................................................TGCTCTTACATCCCTCCTCCTCT.......................................................232.000.00-----1.00---------------------------------------------------------------------------------------------------------------1.00----------
...............................................................GGTGACTGGGAGCTGGCCCTGCCAGGCCTT.................................................................................3012.002.00--------------------------------------------------------------------------------1.00------1.00----------------------------------------
.....................................................................................................TTACATCCCTCCTCCTCCCCTAG..................................................2312.003.00---------------------------------------------------------2.00----------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAAT..................................................................................................2612.0046.001.00-------------------------------------1.00-----------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGGAGCT.................................................................................................2612.002.00-2.00------------------------------------------------------------------------------------------------------------------------------
..............................................................GGGTGACTGGGAGCTGG...............................................................................................1731.671.67--------------------------------------------------1.67-----------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGATTT...................................................................................................2511.004.001.00-------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TTACATCCCTCCTCCTCCCCCTCT.................................................2411.006.00---1.00----------------------------------------------------------------------------------------------------------------------------
................................................................................................TGCTCTTACATCCCTCCTCCTCA.......................................................231.000.00---------------------1.00----------------------------------------------------------------------------------------------------------
....................................................GAGTGGGGATGGGTGACTGGGAGC..................................................................................................2411.001.00--------------1.00-----------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGTAA........................................................................................................201.000.00----------------------------------------------------------------------------------------------------1.00---------------------------
...................................................TGAGTGGGGATGGGTGACTGGGAAAT.................................................................................................2611.0017.00------------------------------------------------------------------------------------------------1.00-------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAAAAA................................................................................................2811.0046.001.00-------------------------------------------------------------------------------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCCCT....................................................2311.0022.00-----1.00--------------------------------------------------------------------------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCCCCCT..................................................2511.001.00----1.00---------------------------------------------------------------------------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCCCAT...................................................2411.0022.00---1.00----------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGAA....................................................................................................2411.0010.00----------------------------------1.00---------------------------------------------------------------------------------------------
...............................................................................................CTGCTCTTACATCCCTC..............................................................1731.001.00----1.00---------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGAGA...................................................................................................2511.0010.00------1.00-------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGGAATAA................................................................................................2711.0017.00------------------------------------------1.00-------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGGAGTT.................................................................................................2611.0021.00----------------1.00---------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAGCAAA...............................................................................................2911.0091.00-------------------1.00------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGAT.....................................................................................................2311.004.00-----------------------------------------------------------------------------------1.00--------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGATA..................................................................................................2611.0046.00----------------------------------------------------------1.00---------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGGAGCTT................................................................................................2711.002.00------1.00-------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGGAGAA.................................................................................................2611.0021.00-----------------------------------1.00--------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAGCTTT...............................................................................................2911.005.00-1.00------------------------------------------------------------------------------------------------------------------------------
................................................................................................TGCTCTTACATCCCTCCTCCTCCGATT...................................................2711.001.00-------------------------------------------------1.00------------------------------------------------------------------------------
................................................................................................TGCTCTTACATCCCTCCTCCT.........................................................2111.001.00--------------------------------1.00-----------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAGCTGGCCCTGCCAGGCCTTGGCTGCTCTTACATCCCTCCTCCTCCCCCAGTTT...............................................771.000.00----------------------------1.00---------------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAGCTGGC..............................................................................................3011.001.00----------------------------------------------------------------------------------1.00---------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAGAAT................................................................................................2811.0071.00------1.00-------------------------------------------------------------------------------------------------------------------------
......................................................................GGGAGCTGGCCCTGCCAGGCCTTGGCTGC...........................................................................2911.001.00----------------------------------1.00---------------------------------------------------------------------------------------------
.....................................................................................................TTACATCCCTCCTCCTCCCA.....................................................2011.001.00-------------------------1.00------------------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGT.....................................................................................................2311.0010.00------------------------------------1.00-------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTTGGA....................................................................................................2411.006.00-----------------------1.00--------------------------------------------------------------------------------------------------------
........ACGTTGAGCCCGTCAAGTTC..................................................................................................................................................2011.001.00--------------------------------------------------------------------------------------------1.00-----------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAGTAA................................................................................................2811.0071.00-------------1.00------------------------------------------------------------------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCCTT....................................................2311.0011.00---1.00----------------------------------------------------------------------------------------------------------------------------
................................................................................................TGCTCTTACATCCCTCCTCCTCC.......................................................2311.001.00-----1.00--------------------------------------------------------------------------------------------------------------------------
..................CGTCAAGTTCAAGTCCTTCGAGG.....................................................................................................................................2311.001.00---------------------------------------------------------1.00----------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAGCTG................................................................................................2811.001.00------1.00-------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGTT....................................................................................................2311.0015.00----------------------------------------------------------------1.00---------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGGAGCTGGT..............................................................................................291.000.00-1.00------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTTG......................................................................................................2211.006.00-------------------------------------------------------1.00------------------------------------------------------------------------
.....................................................................................CAGGCCTTGGCTGCTCTTACATCCCTCCTCC..........................................................3111.001.00-----------------------------1.00--------------------------------------------------------------------------------------------------
..........................................................GGATGGGTGACTGGGAGCTTGCT.............................................................................................231.000.00---------------------------------------------------1.00----------------------------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCCCTAT..................................................2511.0022.00---1.00----------------------------------------------------------------------------------------------------------------------------
...............................................................................................CTGCTCTTACATCCCTCCTCCTCTA......................................................2511.003.00-----------------------------------------------------------------------1.00--------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCCTAGA..................................................2511.0011.00-----------------------------1.00--------------------------------------------------------------------------------------------------
...............................................................................................................................GGAACAAGTGCTTCGAGATGTCA........................2311.001.00-------------------------------------------------------------------------------1.00------------------------------------------------
............................................................ATGGGTGACTGGGAGTCGA...............................................................................................191.000.00-------------------------------------------------------------------------1.00------------------------------------------------------
...............................................................................................CTGCTCTTACATCCCTCCTCCTCAAA.....................................................2611.003.00--------------------------------------------------------------------------------------------------------------------------1.00-----
..................................................................................................CTCTTACATCCCTCCTCCTCC.......................................................2111.001.00-----------------------------------------1.00--------------------------------------------------------------------------------------
.......................................................................................................................CCCAGAAAGGAACAAGCCA....................................191.000.00------------------1.00-------------------------------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACAA.......................................................................................................201.000.00----------------------------------------------------------------------------------------------------------1.00---------------------
...................................................TGAGTGGGGATGGGTGACTGTAA....................................................................................................2311.001.00---------------1.00----------------------------------------------------------------------------------------------------------------
..........................................................GGATGGGTGACTGGGAGCTGGCTTTT..........................................................................................2611.002.00----------------1.00---------------------------------------------------------------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCCCCAT..................................................2511.001.00----1.00---------------------------------------------------------------------------------------------------------------------------
..........................................................GGATGGGTGACTGGGAGCTGGT..............................................................................................2211.002.00--------------------------------1.00-----------------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGAT.....................................................................................................2211.001.00-------------------------------------------------------------------------------------------------1.00------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCCCATT..................................................2511.0022.00----1.00---------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAGAAAA...............................................................................................2911.0071.001.00-------------------------------------------------------------------------------------------------------------------------------
.........................................................GGGATGGGTGACTGGGAGCTGG...............................................................................................2211.001.00-------------------------------------------1.00------------------------------------------------------------------------------------
.....................................................................................................TTACATCCCTCCTCCTCCCCCTT..................................................2311.006.00---1.00----------------------------------------------------------------------------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCCTGA...................................................2411.0011.00------------------------------------------------------------------------------------------------------------------------1.00-------
.......................................................TGGGGATGGGTGACTGGGAGC..................................................................................................2111.001.00---1.00----------------------------------------------------------------------------------------------------------------------------
................................................................GTGACTGGGAGCTGGCC.............................................................................................1711.001.00------1.00-------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAGAT.................................................................................................2711.0071.00------------------------1.00-------------------------------------------------------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCT.......................................................201.000.00-----1.00--------------------------------------------------------------------------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTTTAT.....................................................221.000.00-----------------------------------------1.00--------------------------------------------------------------------------------------
.....................................................................................................TTACATCCCTCCTCCTCCCCTGA..................................................2311.003.00---1.00----------------------------------------------------------------------------------------------------------------------------
..........................................................GGATGGGTGACTGGGAGCTGGCC.............................................................................................2311.001.00---------------1.00----------------------------------------------------------------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCCCC....................................................2311.001.00----1.00---------------------------------------------------------------------------------------------------------------------------
..........................................................GGATGGGTGACTGGGAGCTGGCAA............................................................................................2411.002.00------------------------------------------------------------------------------------------------------1.00-------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAGCTGGCCCTGCCAGGCCTTGGCTGCTCTTACATCCCTCCTCCTCCCCC....................................................7211.001.00----------------------------1.00---------------------------------------------------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCCCTTT..................................................2511.0022.00---1.00----------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGGG....................................................................................................2311.0011.00------1.00-------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGGAA...................................................................................................2411.0017.00------------------------------------1.00-------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGTAAA..................................................................................................2611.0010.001.00-------------------------------------------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGT....................................................................................................2411.009.00-----------------------1.00--------------------------------------------------------------------------------------------------------
................................................................................................TGCTCTTACATCCCTCCTCCTCCA......................................................2411.001.00-----1.00--------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGGAGCAGA...............................................................................................2811.0061.00---1.00----------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGGT....................................................................................................2311.0011.00------------------------------------------------------------------------------------1.00-------------------------------------------
....................................................GAGTGGGGATGGGTGACTGGGAA...................................................................................................2311.001.00--1.00-----------------------------------------------------------------------------------------------------------------------------
..........................................................GGATGGGTGACTGGGAGCTAAAA.............................................................................................231.000.00------1.00-------------------------------------------------------------------------------------------------------------------------
..........................................................GGATGGGTGACTGGGAGCTGGCGT............................................................................................2411.002.00----------------1.00---------------------------------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGTAGC..................................................................................................2511.0015.00-------------------------------------------------------------------------------------------1.00------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAGCTGGCCCTGCCAGGCCTTGGCTGCTCTTACATCCCTCCTCCTCCCT.....................................................711.000.00----------------------------1.00---------------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGATTA.................................................................................................2711.0046.001.00-------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................TCCCTCCTCCTCCCCCACCCC...............................................211.000.00----------------------------------------------------------------------1.00---------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGGAGCTGT...............................................................................................281.000.00----------1.00---------------------------------------------------------------------------------------------------------------------
.....................................................................................................TTACATCCCTCCTCCTCCCTT....................................................2111.001.00----------------------------------------------1.00---------------------------------------------------------------------------------
....................................................GAGTGGGGATGGGTGACTGGGA....................................................................................................2211.001.00----------------------------------------------------------------------1.00---------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGGAAA..................................................................................................2511.0017.00--------------------------------------------------------------------1.00-----------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCCCCATA.................................................2611.001.00---1.00----------------------------------------------------------------------------------------------------------------------------
..........................................................GGATGGGTGACTGGGAGCTGGTA.............................................................................................2311.002.00-----------------------------------1.00--------------------------------------------------------------------------------------------
...............................................................................................CTGCTCTTACATCCCTCCTCCT.........................................................2211.001.00-------------------------------------------------------------------------------------------------------------------1.00------------
..........................................................GGATGGGTGACTGGGAGCTGT...............................................................................................211.000.00-----------------------------------------------1.00--------------------------------------------------------------------------------
................................................AAGTGAGTGGGGATGGGTGACTGGGAG...................................................................................................2711.001.00-------1.00------------------------------------------------------------------------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCCTTAC..................................................2511.0011.00-----1.00--------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTG.......................................................................................................2011.001.00---------------------------------------------1.00----------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGT......................................................................................................2211.004.00--------------------------------------1.00-----------------------------------------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCCAC....................................................2311.0011.00----1.00---------------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGGAGAAA................................................................................................2711.0021.00------------------------------1.00-------------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGTAT...................................................................................................2511.0010.00-------------1.00------------------------------------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGGAGGA.................................................................................................2611.0021.00-------------------------------------------------------------------------------------------------------1.00------------------------
..................................................GTGAGTGGGGATGGGTGACTGGGAGCTGGCC.............................................................................................3111.001.00----------------------------------------------------1.00---------------------------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTCCTCCCCCA...................................................2411.001.00---1.00----------------------------------------------------------------------------------------------------------------------------
.....................................................................................................TTACATCCCTCCTCCTCCC......................................................1911.001.00---------------------1.00----------------------------------------------------------------------------------------------------------
..................................................GTGAGTGGGGATGGGTGA..........................................................................................................1821.001.00------------------------------1.00-------------------------------------------------------------------------------------------------
.......................................................TGGGGATGGGTGACTGGGAGCTGGA..............................................................................................251.000.00---1.00----------------------------------------------------------------------------------------------------------------------------
....................................................................................................CTTACATCCCTCCTCCTCCCT.....................................................211.000.00---------------------------------------------------------------------------------------------------------1.00----------------------
...................................................TGAGTGGGGATGGGTGACTAA......................................................................................................2111.004.00---------------------1.00----------------------------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGAAGT..................................................................................................2511.0015.00---------------------------------------------------------------------------1.00----------------------------------------------------
..................................................GTGAGTGGGGATGGGTGACTGGTTT...................................................................................................2511.0010.00---------------------------1.00----------------------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGTTTT..................................................................................................2511.0015.00----------------------------------1.00---------------------------------------------------------------------------------------------
................................................................................................TGCTCTTACATCCCTCCTCC..........................................................2011.001.00---------------------1.00----------------------------------------------------------------------------------------------------------
...................................................TGAGTGGGGATGGGTGACTGGGAGCTGGCCCTGCCAGGCCTTGGCTGCTCTTACATCCCTCCTCCTC........................................................6711.001.00----------------------------1.00---------------------------------------------------------------------------------------------------
...............................................................................................CTGCTCTTACATCCCTCC.............................................................1820.500.50-----------------------------------------------------------------------------------0.50--------------------------------------------
.................................................................TGACTGGGAGCTGGCC.............................................................................................1640.250.25------------------------------------------------------------------------------------------------------------------------------0.25-
..................................................GTGAGTGGGGATGGGTTACT........................................................................................................2060.170.17--------------------------------------------------------------------------------------0.17-----------------------------------------
..................................................GTGAGTGGGGATGGGT............................................................................................................1660.170.17--0.17-----------------------------------------------------------------------------------------------------------------------------
...................................................................................................TCTTACATCCCTCCTC...........................................................1660.170.17-------------------------------------------------------------------------------------------------------------------------------0.17

Antisense strand
CGTCAACTACGTTGAGCCCGTCAAGTTCAAGTCCTTCGAGGCTGCTCGAAGTGAGTGGGGATGGGTGACTGGGAGCTGGCCCTGCCAGGCCTTGGCTGCTCTTACATCCCTCCTCCTCCCCCAGAAAGGAACAAGTGCTTCGAGATGTCATCCTTCGTGGAGACCAAGGCAATG
....................................................(((.(((((.(((((...(((((((((((......))))..)))).)))...))))).))))))))........................................................
..................................................51.......................................................................124................................................
SizePerfect hitTotal NormPerfect NormSRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		mjTestesWT4()
Testes Data. (testes)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		mjTestesWT3()
Testes Data. (testes)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR037937(GSM510475)
293cand2. (cell line)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR014236(GSM319960)
10 dpp total. (testes)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		mjLiverWT1()
Liver Data. (liver)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR023847(GSM307156)
mESv6.5smallrna_rep1. (cell line)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		mjTestesWT2()
Testes Data. (testes)		mjTestesWT1()
Testes Data. (testes)		SRR059771(GSM562833)
CD4_control. (spleen)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		GSM314559(GSM314559)
ESC dgcr8 (454). (ESC)		SRR059776(GSM562838)
MEF_Dicer. (MEF)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR037906(GSM510442)
brain_rep3. (brain)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		RuiDGCR8KO(Rui)
DGCR8-dependent microRNA biogenesis is essent. (dgcr8 skin)		SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		GSM416732(GSM416732)
MEF. (cell line)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR553603(SRX182809)
source: Spermatids. (Spermatids)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR014229(GSM319953)
10 dpp MILI. (mili testes)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR037928(GSM510466)
e7p5_rep2. (embryo)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)
.............................................................................GGCCCTGCCAGGCCTGCCC.............................................................................. 192.000.00------------------2.00-------------------------------------------------------------------------------------------------------------
......................................................................................................TACATCCCTCCTCCTCCCTA.................................................... 201.000.00-----------------------------------------------------1.00--------------------------------------------------------------------------
..............AGCCCGTCAAGTTCAAGTCC............................................................................................................................................ 2011.001.00-------------------------------------------------------------------------------1.00------------------------------------------------
................CCCGTCAAGTTCAAGTCCTTA......................................................................................................................................... 211.000.00---1.00----------------------------------------------------------------------------------------------------------------------------
.........................................................................................................ATCCCTCCTCCTCCCCCAAGCT............................................... 221.000.00-----------------------------------------------------1.00--------------------------------------------------------------------------
..........GTTGAGCCCGTCAAGTTCAAGTCCTTC......................................................................................................................................... 2711.001.00-------1.00------------------------------------------------------------------------------------------------------------------------
.......................................................................................................ACATCCCTCCTCCTCCTTTT................................................... 201.000.00----------------------------------------------------------------------------------------------------------------------------1.00---
.......................................................................................................ACATCCCTCCTCCTCCCTC.................................................... 191.000.00-----------------------------------------------------1.00--------------------------------------------------------------------------
......................................................................................................TACATCCCTCCTCCTCCCGT.................................................... 201.000.00------------------------------------1.00-------------------------------------------------------------------------------------------
.........................................CTGCTCGAAGTGAGTG..................................................................................................................... 161.000.00-------------------------------------------------------------------------1.00------------------------------------------------------
.............................................................................GGCCCTGCCAGGCCTTTGC.............................................................................. 191.000.00-------------------------------------------------------------------------------------1.00------------------------------------------
........................................................................................................CATCCCTCCTCCTCCCCCAGCG................................................ 221.000.00--------------------------------------------------------------------------1.00-----------------------------------------------------
..............AGCCCGTCAAGTTCA................................................................................................................................................. 1530.670.67------------------------------------------------------------------------------------0.330.33------------------------------------------