ID: uc008gik.10
GENE: Sf1(11)
chr19:6374559-6374768+


(1)
AGO.mut 		(15)
AGO2.ip 		(1)
AGO3.ip 		(2)
B-CELL 		(29)
BRAIN 		(9)
CELL-LINE 		(3)
DCR.mut 		(2)
DGCR8.mut 		(12)
EMBRYO 		(11)
ESC 		(3)
FIBROBLAST 		(3)
HEART 		(2)
KIDNEY 		(13)
LIVER 		(1)
LUNG 		(2)
LYMPH 		(15)
OTHER 		(8)
OTHER.mut 		(1)
PANCREAS 		(1)
PIWI.mut 		(3)
SKIN 		(5)
SPLEEN 		(19)
TESTES 		(2)
THYMUS 		(8)
TOTAL-RNA

Sense strand
GGGAAGTACGCCTGTGGGCTCTGGGGTCTATCGCCTGCATCAAGGAAAAGGTAATGCTGCTTACTCTCTTGGGATCTCTGTCTAGGACTGGGAGCAAATGGGGCTTCTAGCCCAGGACCCTGCTCTCTAAAGCCCAGGACCCTGGTCTTACTGCCTGCAGGTATGATGCCGCCGCCGCCTATGGGCATGATGCCGCCGCCTCCGCCACCT
.............................................................................................((.....((((....((.(((((..((((..((....))..))))..))))).))....))))))....................................................
.............................................................................................94................................................................160................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		mjLiverWT2()
Liver Data. (liver)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR206940(GSM723281)
other. (brain)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR206939(GSM723280)
other. (brain)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		mjLiverWT3()
Liver Data. (liver)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR206942(GSM723283)
other. (brain)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		SRR206941(GSM723282)
other. (brain)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR073954(GSM629280)
total RNA. (blood)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR346415(SRX098256)
source: Testis. (Testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		GSM475281(GSM475281)
total RNA. (testes)		SRR073955(GSM629281)
total RNA. (blood)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		RuiDcrWT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)		SRR553603(SRX182809)
source: Spermatids. (Spermatids)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		GSM510454(GSM510454)
newborn_rep10. (total RNA)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR037931(GSM510469)
293GFP. (cell line)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		GSM510455(GSM510455)
newborn_rep11. (total RNA)		GSM416732(GSM416732)
MEF. (cell line)		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		GSM640577(GSM640577)
small RNA in the liver with paternal control . (liver)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		mjTestesWT2()
Testes Data. (testes)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR037901(GSM510437)
testes_rep2. (testes)		GSM510452(GSM510452)
newborn_rep8. (total RNA)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		GSM361430(GSM361430)
WholeCerebellum_1month_Ptc+-_Ink4c--_rep2. (brain)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR065047(SRR065047)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR014231(GSM319955)
16.5 dpc total. (testes)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR077864(GSM637801)
18-30 nt small RNAs. (liver)		SRR306528(GSM750571)
19-24nt. (ago2 brain)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGT.................................................231252.00211.0048.0023.0010.0011.005.0021.0010.003.003.007.003.003.004.002.005.003.005.003.003.00-3.001.00-2.00--3.00--1.002.00-2.003.005.00-2.003.001.001.003.004.00-3.001.00-1.00---1.00-3.00---1.001.001.001.001.001.00-1.001.00-1.002.00--2.00-1.00---1.00--2.002.00-----2.001.00----1.00-----1.001.001.00-1.00---1.001.00----1.00-----1.00----1.00-1.00-------1.00--1.00---
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAG..................................................221211.00211.0024.0024.0013.0017.0015.00-4.007.00-3.003.005.002.007.001.006.00-4.002.00-4.004.001.002.005.00-2.002.00-1.002.00--1.00-3.00--3.001.001.00-4.00-1.003.001.00-1.002.00---2.00---2.001.001.002.002.001.001.001.001.001.00--1.00---1.00---1.001.00--1.001.001.00---1.00-2.00-------------------1.00------1.00---1.00---1.00---------1.00-----
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGA.................................................23154.00211.005.003.003.001.001.001.002.00-11.00-1.001.002.001.00-1.00--2.00-1.00-1.001.002.00----1.00-2.00-------1.00--------2.00--3.00----1.00----------------1.00--------1.00----------------------------1.00-----------------------1.00----
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCA...................................................21112.0012.001.00---1.00-1.00-------1.00-1.00--------3.00-1.00-1.00---------------------------------------------------1.00--1.00-------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGTT................................................24111.00211.00-1.002.001.00-----------------------------1.00---1.00---------1.00---------------------------2.00-------------------------1.00--1.00-----------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGC....................................................2018.008.00-1.003.00----------1.00-------1.00-----1.00-----------------------------------------1.00----------------------------------------------------------------------
...................................................................................AGGACTGGGAGCAAATGGGGCTTCTAGCCCAGGACCCTGCTCTCTAAAGCCCAGGACCCTGGTCTTACTGCCTGCAG..................................................7718.008.00-------------------8.00------------------------------------------------------------------------------------------------------------------------
................................GCCTGCATCAAGGAAAAG................................................................................................................................................................1817.007.00------1.00-------2.00-----------------1.00----------------------------------------------------------1.00-1.00---1.00------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGTAA...............................................2516.00211.00-----------1.00----------1.00---------------------------------------2.00--------1.00------------------------------------------------------------1.00-------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAT..................................................2216.0012.001.00------------------------------------------1.00--1.001.00------------------------------------------------------------------1.00-------1.00-----------------
...........................................................................................................................................CCCTGGTCTTACTGCCTGCAGT.................................................2215.004.00----1.00------------------------------1.002.00----------------------------------------------------------------------------------------------------1.00--
..........................................................................................................................................ACCCTGGTCTTACTGCCTG.....................................................1915.005.00-------------1.00---------------1.00--------------------------------------------2.00-------------1.00---------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGAA................................................2415.00211.00-1.00-----1.00------------------1.00---1.00----------------------------------------1.00--------------------------------------------------------------------
...........................................................................................................................................CCCTGGTCTTACTGCCTGCAG..................................................2114.004.00------------------1.00--2.00----------------------------------------------------------------------------------------1.00-----------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGC.................................................2314.00211.00------1.00----------2.00-----------------------------1.00--------------------------------------------------------------------------------------------
.........................................................................................................................................GACCCTGGTCTTACTGCCTGCAG..................................................2314.004.001.00-------------3.00-----------------------------------------------------------------------------------------------------------------------------
...........................................................................................................TAGCCCAGGACCCTGCTCTCT..................................................................................2113.003.001.00---------------------2.00---------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAA..................................................2213.0012.00------------------------------------------------------------------------1.00-----------------------------------------------------1.00----1.00--------
..................................................................................................TGGGGCTTCTAGCCCAGGACCC..........................................................................................2213.003.00----------------3.00---------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................CCCTGGTCTTACTGCCTGCAGAA................................................2312.004.00-------------------------2.00------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGTTTT..............................................2612.00211.00-----------1.00----------------------------------------------------------------1.00---------------------------------------------------------------
.GGAAGTACGCCTGTGGGCTCT............................................................................................................................................................................................2112.002.00----------1.00-1.00-------------------------------------------------------------------------------------------------------------------------------
............TGTGGGCTCTGGGGTCTATCGC................................................................................................................................................................................2212.002.00-----------------1.00--------------------------1.00-----------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGTAT...............................................2512.00211.00--1.00--------------------------------------------------------------------------------------------1.00--------------------------------------------
..................................................................................TAGGACTGGGAGCAAATGGGGCTTC.......................................................................................................2512.002.00-------------------------------2.00------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGAGA...............................................2512.00211.00----------------------------2.00---------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................GATGCCGCCGCCGCCTATGGGCAT......................2412.002.00-------2.00------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGTTT...............................................2512.00211.00-----------1.00-------------------------------------------------------------------------------------------------------------1.00------------------
.............................ATCGCCTGCATCAAGGAAAAGGT..............................................................................................................................................................2312.002.00---------1.001.00---------------------------------------------------------------------------------------------------------------------------------
...............................................AAGGTAATGCTGCTTACTCTCTTGGGAT.......................................................................................................................................2812.002.00--------------------------------------------------2.00-----------------------------------------------------------------------------------------
.GGAAGTACGCCTGTGGGCTCTGGGGTCTA....................................................................................................................................................................................2911.001.00-----------------------1.00--------------------------------------------------------------------------------------------------------------------
.....................TGGGGTCTATCGCCTGCATCAAG......................................................................................................................................................................2311.001.00----------------1.00---------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGAAC...............................................2511.00211.00----------1.00---------------------------------------------------------------------------------------------------------------------------------
.....................................CATCAAGGAAAAGGTATGA..........................................................................................................................................................191.000.00----------------------------------------------------------1.00---------------------------------------------------------------------------------
.....GTACGCCTGTGGGCTCTGGGGTCTATC..................................................................................................................................................................................2711.001.00-------------------------------------------------------------------------------------1.00------------------------------------------------------
.......................................................................GGATCTCTGTCTAGGACTGG.......................................................................................................................2011.001.00----------------------------1.00---------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................ATGCCGCCGCCGCCTATGGGC........................2111.001.00-------------------------------------------------------------------------------------1.00------------------------------------------------------
.........................................................................................................................................GACCCTGGTCTTACTGCCTGCAT..................................................231.000.00------------------------------------------------------------------------------1.00-------------------------------------------------------------
......................................................................GGGATCTCTGTCTAGGACT.........................................................................................................................1911.001.00-------------------------------------------------------1.00------------------------------------------------------------------------------------
.......ACGCCTGTGGGCTCTGGGGACT.....................................................................................................................................................................................221.000.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGA....................................................2011.005.00----1.00---------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................CTGGTCTTACTGCCTGCAGA.................................................201.000.00------------1.00-------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................ATGCCGCCGCCTCCGC.....1611.001.00-----------------------1.00--------------------------------------------------------------------------------------------------------------------
................................................................................TCTAGGACTGGGAGCAAATGGG............................................................................................................2211.001.00-------------------------1.00------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCT......................................................1811.001.00---------------------------------------------------------------------------------------------------------1.00----------------------------------
....................CTGGGGTCTATCGCCTGCATCAAGGAA...................................................................................................................................................................2711.001.00--------------------------------------------------------1.00-----------------------------------------------------------------------------------
............................................................................................................................................CCTGGTCTTACTGCCTGCAGT.................................................2111.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------------
............TGTGGGCTCTGGGGTCTATC..................................................................................................................................................................................2011.001.00--------------------------------1.00-----------------------------------------------------------------------------------------------------------
............................TATCGCCTGCATCAAGGAAAAGGTATG...........................................................................................................................................................271.000.00---------------------------------------------------------------------------------------------------------------------------------1.00----------
...........................CTATCGCCTGCATCAAGGA....................................................................................................................................................................1911.001.00----------1.00---------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAAA.................................................2311.0012.00-------------------------------------------------------1.00------------------------------------------------------------------------------------
...........................................................................................................................................CCCTGGTCTTACTGCCTGCAGA.................................................2211.004.00-1.00------------------------------------------------------------------------------------------------------------------------------------------
.........................................AAGGAAAAGGTAATGCTGCTTACTCTCTTGGGATA......................................................................................................................................351.000.00-----------------------------------------------------------1.00--------------------------------------------------------------------------------
............................................................................................................................................CCTGGTCTTACTGCCTGCAG..................................................2011.001.00------------1.00-------------------------------------------------------------------------------------------------------------------------------
...AAGTACGCCTGTGGGCTCTGGGGTCTATCG.................................................................................................................................................................................3011.001.00-----------------------------------------------------------------1.00--------------------------------------------------------------------------
.......................................................................................................................................................................GCCGCCGCCGCCTATGGGCAT......................2111.001.00-----------------------------------------------------------------------------------1.00--------------------------------------------------------
..................................................GTAATGCTGCTTACTCTCTTGGGATCT.....................................................................................................................................2711.001.00------------------------------------------------------------------------------------------------------------1.00-------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGAAA...............................................2511.00211.00-------1.00------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGTA................................................2411.00211.00----------------------------------------------------------------------------------------------1.00---------------------------------------------
.................................................................................................ATGGGGCTTCTAGCCCAGGACCC..........................................................................................2311.001.00------------------------------------------------------1.00-------------------------------------------------------------------------------------
...................................................................................AGGACTGGGAGCAAAT...............................................................................................................1621.001.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------
............................................................................TCTGTCTAGGACTGGGA.....................................................................................................................1711.001.00-----------1.00--------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGAG................................................2411.00211.001.00-------------------------------------------------------------------------------------------------------------------------------------------
..............................................................ACTCTCTTGGGATCTCTGTCTAGGACTGG.......................................................................................................................2911.001.001.00-------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................TCTAGCCCAGGACCCTGCTCTCT..................................................................................2311.001.00--------------------------------------------------------------------1.00-----------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCTT..................................................2211.008.00---------1.00----------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTCAG...................................................2111.001.00-1.00------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................ATGGGGCTTCTAGCCCAGGACA...........................................................................................221.000.00----------------------1.00---------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................GGTATGATGCCGCCGCCGC................................1911.001.00-----------------------------------------------------------------------------1.00--------------------------------------------------------------
..GAAGTACGCCTGTGGGCTCTGGGGTC......................................................................................................................................................................................2611.001.00------------------------------------------------------1.00-------------------------------------------------------------------------------------
............................................................................................................................................CCTGGTCTTACTGCCTGCAGTAT...............................................2311.001.00----------------------------1.00---------------------------------------------------------------------------------------------------------------
.......ACGCCTGTGGGCTCTGGGGTCT.....................................................................................................................................................................................2211.001.00-----------------------------------------------------1.00--------------------------------------------------------------------------------------
..GAAGTACGCCTGTGGGCTCTGGGG........................................................................................................................................................................................2411.001.00-------------------------------1.00------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCACT.................................................2311.0012.001.00-------------------------------------------------------------------------------------------------------------------------------------------
.......ACGCCTGTGGGCTCTGGG.........................................................................................................................................................................................1811.001.00-------------------------------------------------1.00------------------------------------------------------------------------------------------
......TACGCCTGTGGGCTCTGGGG........................................................................................................................................................................................2011.001.00------------------1.00-------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................GTCTTACTGCCTGCAG..................................................1611.001.00---------------1.00----------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCGGT.................................................2311.008.00----------------------------------------------------------------------------------------------------------------------------------1.00---------
........................................................................................................................................GGACCCTGGTCTTACTGCCTGCAG..................................................2411.001.00---------------------------------------------------------------------------------------------------------------------1.00----------------------
..................................................................................TAGGACTGGGAGCAAATGGGGCTTCTAGCCCAGGACCCTGCTCTCTAAAGCCCAGGACCCTGGTCTTACTGCCTGCAG..................................................7811.001.00-------------------1.00------------------------------------------------------------------------------------------------------------------------
......TACGCCTGTGGGCTCTGGGGTAT.....................................................................................................................................................................................231.000.00--------------------------------------------------------------------------------------------------------------------------------1.00-----------
...........................................................................................................................................CCCTGGTCTTACTGCCTGCA...................................................2011.001.00------------------------------------------------------------------------------------1.00-------------------------------------------------------
.........................................................................................................................................GACCCTGGTCTTACTGCCTGCAGA.................................................2411.004.00-------------------------------------------------------1.00------------------------------------------------------------------------------------
............................................................................................................................................CCTGGTCTTACTGCCTGCAGTAAT..............................................2411.001.00----------------------------1.00---------------------------------------------------------------------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGCT................................................2411.00211.00--1.00-----------------------------------------------------------------------------------------------------------------------------------------
....................................GCATCAAGGAAAAGGAGT............................................................................................................................................................181.000.00-------------------------------------------------------------------------------------------------------------------1.00------------------------
.........GCCTGTGGGCTCTGGGGTCT.....................................................................................................................................................................................2011.001.00-------------------------------------------------------------------------------------------------------1.00------------------------------------
.............GTGGGCTCTGGGGTCTATCGCCTGCA...........................................................................................................................................................................2611.001.00----------------------1.00---------------------------------------------------------------------------------------------------------------------
.....GTACGCCTGTGGGCTCTGGGGTCTAT...................................................................................................................................................................................2611.001.00---------------------------------------1.00----------------------------------------------------------------------------------------------------
.....................TGGGGTCTATCGCCTGCATCAAGG.....................................................................................................................................................................2411.001.00-------------------------------------------------------------------------------------------------------------------------------1.00------------
..................................................................................................................................................................ATGATGCCGCCGCCGCCTATGGGCAT......................2611.001.00----------1.00---------------------------------------------------------------------------------------------------------------------------------
..................................................GTAATGCTGCTTACTCTCTTGGGAT.......................................................................................................................................2511.001.00----------------------------------------------------------------------------------------1.00---------------------------------------------------
..................................................................................................TGGGGCTTCTAGCCCAGGACA...........................................................................................211.000.00------------------------------------------------------------------------------------------1.00-------------------------------------------------
...................................................................................AGGACTGGGAGCAAATGGGGCTTCTAG....................................................................................................2711.001.00------------------------------------------------------------------------------------------1.00-------------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCATT.................................................2311.0012.00--------------------------------1.00-----------------------------------------------------------------------------------------------------------
................................................................................................................................................................GTATGATGCCGCCGCCGCCTATGGGCATGATG..................3211.001.00------------------------------------------------------------------------------------------------1.00-------------------------------------------
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAGAAT...............................................2511.00211.00------------1.00-------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................GCCCAGGACCCTGGTCTTACTGCCTGCAG..................................................2911.001.00--------------------------------------------------------------------1.00-----------------------------------------------------------------------
........................................................................................................................TGCTCTCTAAAGCCCAGG........................................................................1820.500.50----------------0.50---------------------------------------------------------------------------------------------------------------------------
................................................................................TCTAGGACTGGGAGCAAA................................................................................................................1820.500.50-------0.50------------------------------------------------------------------------------------------------------------------------------------
.................................CCTGCATCAAGGAAAAG................................................................................................................................................................1730.330.33-----------------------------------0.33--------------------------------------------------------------------------------------------------------
.............................................................................................................................................CTGGTCTTACTGCCTG.....................................................1640.250.25---0.25----------------------------------------------------------------------------------------------------------------------------------------
..................................CTGCATCAAGGAAAAG................................................................................................................................................................1640.250.25----------------------0.25---------------------------------------------------------------------------------------------------------------------

Antisense strand
GGGAAGTACGCCTGTGGGCTCTGGGGTCTATCGCCTGCATCAAGGAAAAGGTAATGCTGCTTACTCTCTTGGGATCTCTGTCTAGGACTGGGAGCAAATGGGGCTTCTAGCCCAGGACCCTGCTCTCTAAAGCCCAGGACCCTGGTCTTACTGCCTGCAGGTATGATGCCGCCGCCGCCTATGGGCATGATGCCGCCGCCTCCGCCACCT
.............................................................................................((.....((((....((.(((((..((((..((....))..))))..))))).))....))))))....................................................
.............................................................................................94................................................................160................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		mjLiverWT2()
Liver Data. (liver)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR206940(GSM723281)
other. (brain)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR206939(GSM723280)
other. (brain)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		mjLiverWT3()
Liver Data. (liver)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR206942(GSM723283)
other. (brain)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		SRR206941(GSM723282)
other. (brain)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR073954(GSM629280)
total RNA. (blood)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR346415(SRX098256)
source: Testis. (Testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		GSM475281(GSM475281)
total RNA. (testes)		SRR073955(GSM629281)
total RNA. (blood)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		RuiDcrWT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)		SRR553603(SRX182809)
source: Spermatids. (Spermatids)		SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		GSM510454(GSM510454)
newborn_rep10. (total RNA)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR037931(GSM510469)
293GFP. (cell line)		SRR306529(GSM750572)
19-24nt. (ago2 brain)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		GSM510455(GSM510455)
newborn_rep11. (total RNA)		GSM416732(GSM416732)
MEF. (cell line)		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		GSM640577(GSM640577)
small RNA in the liver with paternal control . (liver)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		mjTestesWT2()
Testes Data. (testes)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR014235(GSM319959)
2 dpp total. (testes)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR095855BC7(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR037901(GSM510437)
testes_rep2. (testes)		GSM510452(GSM510452)
newborn_rep8. (total RNA)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		GSM361430(GSM361430)
WholeCerebellum_1month_Ptc+-_Ink4c--_rep2. (brain)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR065047(SRR065047)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR014231(GSM319955)
16.5 dpc total. (testes)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR029041(GSM433293)
6w_homo_tdrd6-KO. (tdrd6 testes)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR077864(GSM637801)
18-30 nt small RNAs. (liver)		SRR306528(GSM750571)
19-24nt. (ago2 brain)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)
..........................................................................................................................................ACCCTGGTCTTACTGCCTGCAG.................................................. 2211.001.00-----------------------------------------------------------------------------------------------------------------------1.00--------------------
...................................................................................................................................................................TGATGCCGCCGCCGCC............................... 161.000.00------------------------------------------------------------------------------------------------------------------------------------------1.00-
....................................................................................................................ACCCTGCTCTCTAAAGTACA.......................................................................... 201.000.00-----------------------------------------------------------------------------------------------------------------1.00--------------------------
........................................................................................................TTCTAGCCCAGGACCCT......................................................................................... 1720.500.50-------------------------------------------------------------------------------------------------------------------------------------------0.50
.......................................................................................................CTTCTAGCCCAGGACCCT......................................................................................... 1820.500.50----------------0.50---------------------------------------------------------------------------------------------------------------------------