ID: uc008ghu.12
GENE: Atg2a(13)
chr19:6250218-6250462+


(1)
AGO.mut
(2)
AGO1.ip
(11)
AGO2.ip
(2)
AGO3.ip
(3)
B-CELL
(28)
BRAIN
(3)
CELL-LINE
(1)
DCR.mut
(2)
DGCR8.mut
(7)
EMBRYO
(6)
ESC
(2)
FIBROBLAST
(1)
HEART
(7)
LIVER
(1)
LUNG
(1)
LYMPH
(11)
OTHER
(7)
OTHER.mut
(2)
PIWI.ip
(2)
PIWI.mut
(5)
SKIN
(4)
SPLEEN
(1)
TDRD1.ip
(21)
TESTES
(1)
TOTAL-RNA

Sense strand
TGGCCCCCCAGCTCCTACCCGCCTGGAACTTACTTGCTCAGACCTGCAAGGTAATCCTGTCTAGGAAACAGCTGGGGTGGGCCCCAGGACAGGTGTCCCTTTTTATCCCAGGGACACGGATGTGACTCTGGGGGAGCAATGGTGAGGAACAGGGAAGAGGCAGCTATGAGGCCCTGTCCTTTCTGTCCCCTCCAGGAATCTACGAAGATGGAGAGAAGCCACCAGTCCCCTGCCTGCGGGTCTCC
...............................................................................................................................(((((((..((.....((((.((((((......((....))...))))))))))..))..))).))))..................................................
.........................................................................................................................122......................................................................195................................................
SizePerfect hitTotal NormPerfect NormSRR394083(GSM855969)
background strain: C57BL6/SV129cell type: KRa. (cell line)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
mjTestesWT1()
Testes Data. (testes)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
mjTestesWT4()
Testes Data. (testes)
SRR553582(SRX182788)
source: Brain. (Brain)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR206942(GSM723283)
other. (brain)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
GSM510450(GSM510450)
newborn_rep6. (total RNA)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
GSM510444(GSM510444)
brain_rep5. (brain)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR206939(GSM723280)
other. (brain)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR073954(GSM629280)
total RNA. (blood)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR059776(GSM562838)
MEF_Dicer. (MEF)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)
SRR553584(SRX182790)
source: Heart. (Heart)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR346415(SRX098256)
source: Testis. (Testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
GSM314559(GSM314559)
ESC dgcr8 (454). (ESC)
SRR525241(SRA056111/SRX170317)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR059774(GSM562836)
MEF_control. (MEF)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
GSM261958(GSM261958)
oocytesmallRNA-24to30. (oocyte)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
mjTestesWT2()
Testes Data. (testes)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR206941(GSM723282)
other. (brain)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR077866(GSM637803)
18-30 nt small RNAs. (liver)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR077864(GSM637801)
18-30 nt small RNAs. (liver)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR037902(GSM510438)
testes_rep3. (testes)
SRR206940(GSM723281)
other. (brain)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCAGT.................................................22138.005.00-1.002.005.00---2.00-----1.002.001.001.00-------2.003.001.001.00--1.00-1.00--------1.00--2.001.00-1.001.00------1.00-1.00----------1.00----------------1.00---1.00---1.001.00-1.00----
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAACAGG............................................................................................27118.0018.00----5.00-6.00----------2.00----------------1.00-------------------------------------1.00-----1.00-----------1.001.00---------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCAGA.................................................22115.005.0014.00---------------1.00------------------------------------------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGG..................................................................................................21110.0010.00-----2.00--4.00-------------------1.00---1.00--2.00-----------------------------------------------------------------
.........................................................................................................................................................GAAGAGGCAGCTATGAGGCCC.......................................................................2118.008.00-------1.00---2.00--------2.00------------------1.00-----------------------1.00------1.00------------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCAGTT................................................2316.005.00-1.00-1.00-1.00-------------------------1.00--------2.00------------------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAG................................................................................................2316.002.00--6.00--------------------------------------------------------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAAC...............................................................................................2416.006.00---------2.00---1.00-------------2.00----------------------------------------------------1.00--------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAG...................................................................................................2015.005.00-------------1.00---------------2.00-1.00---------------------------------------------1.00-----------------------
................................................................................................................................TGGGGGAGCAATGGTGAGGAACAGG............................................................................................2515.005.00----1.00---------------------------------------------------1.00---1.00------1.00--------------------1.00------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCAG..................................................2115.005.00-----1.00----------1.00------3.00-----------------------------------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAAA...............................................................................................2413.001.00----------3.00------------------------------------------------------------------------------------------
...............................................................................................................................CTGGGGGAGCAATGGTGAGGAACAGG............................................................................................2613.003.00------------------1.00--------------------------------1.00------------------------------------------------1.00
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAACAGT............................................................................................2713.001.00----1.00---------------------------------------------1.00---1.00----------------------------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCAGTAT...............................................2413.005.00-2.00----------------1.00----------------------------------------------------------------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCATT.................................................2213.002.00---------------------1.00---------------------1.00--------------------1.00------------------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCAGTTT...............................................2413.005.00-1.00-------------------------------1.00---------1.00---------------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGATT...............................................................................................2413.002.00---------1.00---------------------------------------1.00--------1.00------------------------------------------
..........................................................................................................................................ATGGTGAGGAACAGGGAAGAGGC....................................................................................2313.003.00-2.00---------------------------------------------------------------------------------1.00-----------------
...........................................................................................................................................TGGTGAGGAACAGGGAAGAGGC....................................................................................2212.002.00-------------------------------------2.00---------------------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGA.................................................................................................2212.002.00-------------1.00-------------------1.00-------------------------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAAT...............................................................................................2412.001.00--------------------------1.00-----------1.00--------------------------------------------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCA...................................................2012.002.00-------------------2.00---------------------------------------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGA....................................................................................................1912.002.00-------------------------------------------------------------------------1.00----------1.00----------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCAGTA................................................2312.005.00--------------------------------------------------------------------------------------1.00-----------1.00--
...............................................................................................................................................................................GTCCTTTCTGTCCCCTCCAGTTT...............................................232.000.00-1.00-1.00-------------------------------------------------------------------------------------------------
.......................................................................................................................ATGTGACTCTGGGGGAGCAATGGTGAGGAACAGGGAAGAGGCAGCTATGAGGCCCTGTCCTTTCTGTCCCCTCCAG..................................................7612.002.00------------------------------------------2.00----------------------------------------------------------
...............................................................................................................................................................................................................ATGGAGAGAAGCCACCAGTCCCCT..............2411.001.00--------------1.00--------------------------------------------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAACAGGTT..........................................................................................2911.0018.00-----------------1.00-----------------------------------------------------------------------------------
............................................................................................................................ACTCTGGGGGAGCAATGGTGAG...................................................................................................2211.001.00-----------1.00-----------------------------------------------------------------------------------------
.........................................................................................................................................AATGGTGAGGAACAGGGAAGAGGCAGCTA...............................................................................2911.001.00----------------------1.00------------------------------------------------------------------------------
..............................................................................................................................................TGAGGAACAGGGAAGAGGCAGCTATGA............................................................................2711.001.00---------------------------------------------------------------------------------------1.00-------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAACA..............................................................................................2511.001.00----------------------------------------------------------------------------1.00------------------------
.................................................................................................................................................................AGCTATGAGGCCCTGTCTCTC...............................................................211.000.00------------1.00----------------------------------------------------------------------------------------
.........................................................................................................................GTGACTCTGGGGGAGCAATGGT......................................................................................................2211.001.00----------------------------------1.00------------------------------------------------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCTGT.................................................221.000.00---------------------1.00-------------------------------------------------------------------------------
...............................................................................................................................CTGGGGGAGCAATGGTGAGG..................................................................................................2011.001.00---------------------------------------------------------------------1.00-------------------------------
...............................................................................................................................................GAGGAACAGGGAAGAGGACA..................................................................................201.000.00------------1.00----------------------------------------------------------------------------------------
.........................................................................................................................................................GAAGAGGCAGCTATGAGCCCC.......................................................................211.000.00-------1.00---------------------------------------------------------------------------------------------
................................................................................................................................................................................TCCTTTCTGTCCCCTCCAGAA................................................211.000.00---------------------1.00-------------------------------------------------------------------------------
................................................................................................................................TGGGGGAGCAATGGTGAGGAAC...............................................................................................2211.001.00-------------------------------------------------------------1.00---------------------------------------
...............................................................................................................................................................................................................ATGGAGAGAAGCCACCAGTC..................2011.001.00---------------------------------------------------------------------------------------------------1.00-
................................................................................................................................TGGGGGAGCAATGGTGAGGAACAGGGA..........................................................................................2711.001.00------------------------------------------------------------------1.00----------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAT................................................................................................2311.002.00---------------1.00-------------------------------------------------------------------------------------
...............................................................................................................................CTGGGGGAGCAATGGTGAGGAACAGGA...........................................................................................2711.003.00----1.00------------------------------------------------------------------------------------------------
.................................TTGCTCAGACCTGCAAGGAATC..............................................................................................................................................................................................221.000.00---------------------------------------------------------------------------1.00-------------------------
...............................................................................................................................................................GCAGCTATGAGGCCCTCGGA..................................................................201.000.00-----------1.00-----------------------------------------------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAAAGT.............................................................................................2611.001.00--------------------------------------1.00--------------------------------------------------------------
................................................AGGTAATCCTGTCTAGGAAACAG..............................................................................................................................................................................2311.001.00----------------------1.00------------------------------------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAACAG.............................................................................................2611.001.00---------------1.00-------------------------------------------------------------------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCAGTAA...............................................2411.005.00------------------1.00----------------------------------------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGAA................................................................................................2311.001.00---------1.00-------------------------------------------------------------------------------------------
...............................................................................................................................................GAGGAACAGGGAAGAGCC....................................................................................181.000.00-----------------------------------------------------------1.00-----------------------------------------
..........................................................................................................................................ATGGTGAGGAACAGGGAAGAGGCAAT.................................................................................261.000.00--------------------------------------------------------------------------1.00--------------------------
.........................................................................................................................................................................................................ACGAAGATGGAGAGAAGCCACC......................2211.001.00---------------------------------------1.00-------------------------------------------------------------
.....................CCTGGAACTTACTTGCTCAGACCTGCA.....................................................................................................................................................................................................2711.001.00----------------------------------------------1.00------------------------------------------------------
................................................................................................................................................................................TCCTTTCTGTCCCCTCCAGTCT...............................................221.000.00-1.00---------------------------------------------------------------------------------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCAAA.................................................2211.002.00---1.00-------------------------------------------------------------------------------------------------
................................................................................................................................TGGGGGAGCAATGGTGAGGAACAG.............................................................................................2411.001.00--------------------------1.00--------------------------------------------------------------------------
...........................................................................................................................................TGGTGAGGAACAGGGAAGAG......................................................................................2011.001.00------------1.00----------------------------------------------------------------------------------------
............................................................................................................................................................................CCTGTCCTTTCTGTCCCCTCCAG..................................................2311.001.00-----1.00-----------------------------------------------------------------------------------------------
.............................................................................................................................................................................CTGTCCTTTCTGTCCCCTCCAGGAATCTA...........................................2911.001.00----------------------1.00------------------------------------------------------------------------------
.........................................................................................................................................................................................................ACGAAGATGGAGAGAAGCCA........................2011.001.00--------------------------------------------------------------1.00--------------------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCC...................................................201.000.00-------------------1.00---------------------------------------------------------------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCTCCCGTT................................................231.000.00---------------------------------------------1.00-------------------------------------------------------
.........................................................................................................................................AATGGTGAGGAACAGGGAA.........................................................................................1911.001.00-----------------------------------------------------1.00-----------------------------------------------
...........................................................................................................................................TGGTGAGGAACAGGGAAGAGA.....................................................................................2111.001.00--------------------------------------------------------------------------------------------1.00--------
................................................................................................................................................................................TCCTTTCTGTCCCCTCCAGTT................................................211.000.00---------------------------------------------------------------------------------1.00-------------------
...............TACCCGCCTGGAACTTACTTGCTCAGACC.........................................................................................................................................................................................................2911.001.00----------------------------------------------------------------------------------1.00------------------
............................................................................................................................................................................CCTGTCCTTTCTGTCCCCTCCAGT.................................................2411.001.00-----------------------------------------1.00-----------------------------------------------------------
...........................................................................................................................................................................................................GAAGATGGAGAGAAGCCACCA.....................2111.001.00-------------------------------------------------------------------------------1.00---------------------
............................................................................................................................................................................CCTGTCCTTTCTGTCCCCATT....................................................211.000.00-1.00---------------------------------------------------------------------------------------------------
......................................................................................................................................................AGGGAAGAGGCAGCTTAG.............................................................................181.000.00------------------------------------1.00----------------------------------------------------------------
..............................................................................................................................TCTGGGGGAGCAATGGTGAGGATTA..............................................................................................2511.002.00--------------------1.00--------------------------------------------------------------------------------
................................................................................................................................TGGGGGAGCAATGGTGAGGAC................................................................................................211.000.00-----1.00-----------------------------------------------------------------------------------------------
..........................................................................................................................................................................GCCCTGTCCTTTCTGTCCCCTCCAG..................................................2511.001.00----------------------------1.00------------------------------------------------------------------------
........................GGAACTTACTTGCTCAGACCTGC......................................................................................................................................................................................................2311.001.00------------------------------1.00----------------------------------------------------------------------
......................................................................................................................................................................................................TCTACGAAGATGGAGAGAAGCC.........................2211.001.00-------------------------------------------------------------------------------------------------1.00---
...................................................................ACAGCTGGGGTGGGCTGCG...............................................................................................................................................................191.000.00------------1.00----------------------------------------------------------------------------------------
...............................................................................................................................CTGGGGGAGCAATGGTGAG...................................................................................................1911.001.00------------------------1.00----------------------------------------------------------------------------
......................CTGGAACTTACTTGCTCAGACCTGCA.....................................................................................................................................................................................................2611.001.00----------------------------------------------------1.00------------------------------------------------
..............................................................................................................................................TGAGGAACAGGGAAGAG......................................................................................1750.200.20--0.20--------------------------------------------------------------------------------------------------

Antisense strand
TGGCCCCCCAGCTCCTACCCGCCTGGAACTTACTTGCTCAGACCTGCAAGGTAATCCTGTCTAGGAAACAGCTGGGGTGGGCCCCAGGACAGGTGTCCCTTTTTATCCCAGGGACACGGATGTGACTCTGGGGGAGCAATGGTGAGGAACAGGGAAGAGGCAGCTATGAGGCCCTGTCCTTTCTGTCCCCTCCAGGAATCTACGAAGATGGAGAGAAGCCACCAGTCCCCTGCCTGCGGGTCTCC
...............................................................................................................................(((((((..((.....((((.((((((......((....))...))))))))))..))..))).))))..................................................
.........................................................................................................................122......................................................................195................................................
SizePerfect hitTotal NormPerfect NormSRR394083(GSM855969)
background strain: C57BL6/SV129cell type: KRa. (cell line)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
mjTestesWT1()
Testes Data. (testes)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
mjTestesWT4()
Testes Data. (testes)
SRR553582(SRX182788)
source: Brain. (Brain)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR206942(GSM723283)
other. (brain)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
GSM510450(GSM510450)
newborn_rep6. (total RNA)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
GSM510444(GSM510444)
brain_rep5. (brain)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR206939(GSM723280)
other. (brain)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
mjTestesKO5()
Testes Data. (Zcchc11 testes)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR073954(GSM629280)
total RNA. (blood)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR059776(GSM562838)
MEF_Dicer. (MEF)
SRR014236(GSM319960)
10 dpp total. (testes)
SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)
SRR553584(SRX182790)
source: Heart. (Heart)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR346415(SRX098256)
source: Testis. (Testes)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
GSM314559(GSM314559)
ESC dgcr8 (454). (ESC)
SRR525241(SRA056111/SRX170317)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR059774(GSM562836)
MEF_control. (MEF)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
GSM261958(GSM261958)
oocytesmallRNA-24to30. (oocyte)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
mjTestesWT2()
Testes Data. (testes)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR037921(GSM510459)
e12p5_rep3. (embryo)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR206941(GSM723282)
other. (brain)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR077866(GSM637803)
18-30 nt small RNAs. (liver)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR077864(GSM637801)
18-30 nt small RNAs. (liver)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR037902(GSM510438)
testes_rep3. (testes)
SRR206940(GSM723281)
other. (brain)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
.......CCAGCTCCTACCCGCCTTA........................................................................................................................................................................................................................... 191.000.00------------------------------------1.00----------------------------------------------------------------
.......CCAGCTCCTACCCGCCGC............................................................................................................................................................................................................................ 181.000.00-----------------------------------------------------------------------------------------------1.00-----
.......................TGGAACTTACTTGCTCACGGA......................................................................................................................................................................................................... 211.000.00-----------------------------------------------------------------1.00-----------------------------------
............................................................................................................................................................................CCTGTCCTTTCTGTCCCCACA.................................................... 211.000.00-----------------------------------------------------------------------1.00-----------------------------
..............................................................................................................................................................................TGTCCTTTCTGTCCCCAAA.................................................... 191.000.00----------1.00------------------------------------------------------------------------------------------