ID: uc008gev.4
GENE: Ehbp1l1(14)
chr19:5710648-5710842-


(1)
AGO.mut 		(1)
AGO1.ip 		(4)
AGO2.ip 		(1)
AGO3.ip 		(8)
B-CELL 		(15)
BRAIN 		(4)
CELL-LINE 		(2)
DCR.mut 		(1)
DGCR8.mut 		(11)
EMBRYO 		(4)
ESC 		(5)
FIBROBLAST 		(6)
HEART 		(2)
KIDNEY 		(12)
LIVER 		(2)
LUNG 		(4)
LYMPH 		(23)
OTHER 		(4)
OTHER.mut 		(2)
OVARY 		(2)
PIWI.ip 		(1)
PIWI.mut 		(4)
SKIN 		(8)
SPLEEN 		(15)
TESTES 		(1)
THYMUS 		(6)
TOTAL-RNA 		(1)
UTERUS

Sense strand
CCCCTCCTACTGAGGAGTCATCACCCAGCCTGGGGGAAGAGACAGGCCTGGTAAGGAGAGTTAGGTGGGCAGAGTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTCTGCCTCCTTCCTTCCCCTTCTAGCAACGGTTCCAGGACACAAGTCAGTACGTGTGCGCAGAGCTGCAAGCCCT
......................................................((..((..(((.((((((((..(((............(((((.(((...))).))))))))....)))))))))))..))..)).........................................................
..................................................51............................................................................................145................................................
SizePerfect hitTotal NormPerfect NormSRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		mjTestesWT1()
Testes Data. (testes)		SRR073954(GSM629280)
total RNA. (blood)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesWT4()
Testes Data. (testes)		SRR073955(GSM629281)
total RNA. (blood)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		mjLiverWT3()
Liver Data. (liver)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR060845(GSM561991)
total RNA. (brain)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR065048(SRR065048)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		mjTestesWT3()
Testes Data. (testes)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR037910(GSM510447)
newborn_rep3. (total RNA)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR095855BC2(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjTestesWT2()
Testes Data. (testes)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR065050(SRR065050)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR095855BC3(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR206942(GSM723283)
other. (brain)		SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR059776(GSM562838)
MEF_Dicer. (MEF)		SRR042476(GSM539868)
mouse heart tissue [09-002]. (heart)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR095855BC10(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR014234(GSM319958)
Ovary total. (ovary)		SRR037923(GSM510461)
e9p5_rep1. (embryo)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR037909(GSM510446)
newborn_rep2. (total RNA)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042479(GSM539871)
mouse liver tissue [09-002]. (liver)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR037927(GSM510465)
e7p5_rep1. (embryo)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
..................................................GTAAGGAGAGTTAGGTGGGCAGA..........................................................................................................................231242.00242.0032.0022.009.0015.004.007.00-5.00--7.009.0013.002.008.005.005.004.001.003.009.002.005.003.001.003.003.003.003.001.002.00-1.002.003.002.00-1.001.00--2.00--2.001.002.00--3.00-3.001.001.00-1.001.002.00--2.002.002.00-1.001.00----1.001.00--1.00-1.001.00----1.00--1.001.001.00------1.00--1.00-----1.001.00-------1.00--1.001.00---1.001.00------1.00----
..................................................GTAAGGAGAGTTAGGTGGGCAG...........................................................................................................................221108.00108.0028.003.002.002.006.003.0015.002.00--2.00--1.001.001.001.002.003.002.00-1.00-1.001.001.001.001.001.002.002.00---1.00-------1.00----2.00--1.00---2.00-1.00-2.001.00-----1.001.00---------1.001.00------------1.00-1.00------1.00--------1.001.00------------1.00---1.00--1.00---
..................................................GTAAGGAGAGTTAGGTGGGCAGAA.........................................................................................................................24132.00242.003.00-1.001.003.002.00---------1.001.001.004.00--1.00---2.00-1.001.00--2.00---1.00-1.00----1.00-----1.00------1.00---------------------------1.00------------------1.00---------------1.00--------------
..................................................GTAAGGAGAGTTAGGTGGGCAGT..........................................................................................................................23124.00108.005.003.00-1.001.00-------------1.00---1.00-1.00--------------------2.00-------1.00---------1.00--1.00-1.00------1.00-------------------1.00----1.00-----------------------1.00--1.00-----
...................................................TAAGGAGAGTTAGGTGGGCAGA..........................................................................................................................22124.0024.001.005.001.00-------3.001.00-1.00-1.00-------1.00-------3.00----2.002.001.00---------1.00------------------1.00-----------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAT.........................................................................................................................24118.00242.001.002.00-3.001.003.00-1.00-----2.00---------1.00----------------------------------------1.00--------1.00-------1.00-------1.00-------------------------------------------
..................................................GTAAGGAGAGTTAGGTGG...............................................................................................................................18116.0016.001.00-1.00-1.00--2.005.00------1.00-----------------1.00------------------1.00----------------------1.00-------------------------1.00-----1.00-------------------------
..................................................GTAAGGAGAGTTAGGTGGGCA............................................................................................................................21114.0014.006.00-1.001.001.001.00-------1.00---1.00--------------------------------------------------------1.00------------------------------------------------1.00---------
..................................................GTAAGGAGAGTTAGGTGGGCAGAGT........................................................................................................................25113.0013.00-----1.00--9.00----1.00-------------------------1.00--------------------------------------------1.00------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAAA........................................................................................................................25113.00242.002.00-3.00--------1.00-1.00-----2.00----1.00-1.00------1.00-------1.00-------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAAT........................................................................................................................25112.00242.001.001.001.00--2.00----1.001.00----1.001.00------1.00-------1.00--------------------------------------1.00-------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGG..............................................................................................................................19112.0012.002.00-1.00----1.00------1.00-1.00-----------------------4.00--------------------------------1.00-------------------------------------------1.00---------------
..................................................GTAAGGAGAGTTAGGTGGGCAGATT........................................................................................................................2519.00242.004.00----1.00------------1.00----------2.00-----------1.00-------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAT...........................................................................................................................2217.0014.002.00-------------------------------1.00---------1.00----1.00--1.00------------1.00---------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAA...........................................................................................................................2216.0014.001.00-------------------------------1.00--1.002.00----------------------1.00-------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAG...........................................................................................................................2115.005.001.00---3.00-----1.00--------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGTAA........................................................................................................................2514.00108.00-------------------3.00----------1.00------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAGTT.......................................................................................................................2613.003.00--------------------------------------1.002.00---------------------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAGAGTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTCTGCCTCCTTCCTTCCCCTT......................................................9013.003.00---------3.00---------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAGTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTCTGCCTCC..................................................................7913.003.00---------3.00---------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGG..........................................................................................................................2312.00108.00---------------1.00---------------------------------------------------1.00-----------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCATA..........................................................................................................................2312.0014.002.00------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................TGCCTCCTTCCTTCCCCTTCTAGT.................................................2412.001.00--1.00------------------------------------------------------------------------------------------------------------1.00---------------------
..................................................GTAAGGAGAGTTAGGTGGAAT............................................................................................................................2112.0016.00-1.00--------------1.00--------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAAAA.......................................................................................................................2612.00242.00--1.00-1.00--------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGTA.........................................................................................................................2412.00108.00-1.00-------------------------1.00---------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAGTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTCTGCCTCCT.................................................................8012.002.00---------2.00---------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAAT..........................................................................................................................2312.0014.00-------------1.00------------------------------------------------------------------------------------1.00----------------------------------
.......................................................GAGAGTTAGGTGGGCAGA..........................................................................................................................1812.002.00--2.00----------------------------------------------------------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAGAAT........................................................................................................................2412.0024.00--1.00---------------------1.00------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAATAA......................................................................................................................2712.00242.00---------------------2.00---------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGATA........................................................................................................................2512.00242.001.00---------------------------------------------------------------------------------------1.00--------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAAC........................................................................................................................2512.00242.00--1.00----------1.00-----------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAG.........................................................................................................................2412.002.001.00--------------------------------------1.00---------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGTT.........................................................................................................................2412.00108.001.00-------------------------------------------------1.00----------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAGAT.........................................................................................................................2312.0024.00-1.00-1.00---------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGTCAG...........................................................................................................................2212.0016.00---1.00---1.00-----------------------------------------------------------------------------------------------------------------------------
......................................................GGAGAGTTAGGTGGGCAGA..........................................................................................................................1912.002.00--------------1.00------------------------------------------------------------------------------1.00---------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAGATAT.......................................................................................................................2511.0024.001.00------------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAGA........................................................................................................................2511.002.00-------1.00-----------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAAAGA......................................................................................................................2711.00242.00-----------1.00-------------------------------------------------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAAGA.........................................................................................................................231.000.00------------------------1.00------------------------------------------------------------------------------------------------------------
..........................................................................................................................TGCCTCCTTCCTTCCCCTTCTAG..................................................2311.001.00-1.00-----------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAAAAA........................................................................................................................2511.0014.00-------------1.00-----------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGATTT.......................................................................................................................2611.00242.001.00------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................CAGTACGTGTGCGCAGAGCTGCAAGCCCT2911.001.00------------------------------------------------------------------------1.00------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAGAAA........................................................................................................................2411.0024.00--------------1.00----------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCCG...........................................................................................................................2211.001.00------1.00------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGTAGA..........................................................................................................................2311.0012.00----------------------------------------------------------------------------------------------------------1.00--------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAAG........................................................................................................................2511.00242.00-----------------------------------------------------------------------------------------------------------------------------1.00-------
..........................................................................TTGGTGTGGTACTTTCTGAGCTGGCC...............................................................................................2611.001.00------------------------------------------------------------------------------1.00------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAGTAT........................................................................................................................2411.005.00--------------------------------------------------------------------1.00----------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGA.............................................................................................................................2011.0012.00-------------------------------------------------------------------------------1.00-----------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAGTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTCTGCCTCCTTCCTTCCCCTTCT....................................................9311.001.00---------1.00---------------------------------------------------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAGT..........................................................................................................................2211.005.00--1.00----------------------------------------------------------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAGTA.........................................................................................................................2311.005.00------------------------------1.00------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGACT........................................................................................................................2511.00242.00---1.00---------------------------------------------------------------------------------------------------------------------------------
.................................................................TGGGCAGAGTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTCTGCCTCCTTCCTTCCCCTTCTAG..................................................8011.001.00---------1.00---------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGAAAT..........................................................................................................................2311.0012.00----1.00--------------------------------------------------------------------------------------------------------------------------------
.........................................................................GTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTC.........................................................................4911.001.00---------1.00---------------------------------------------------------------------------------------------------------------------------
................................................................GTGGGCAGAGTTGGTGTGGTACTTTCTGAGCT...................................................................................................3211.001.00-----------1.00-------------------------------------------------------------------------------------------------------------------------
.......................................................GAGAGTTAGGTGGGCAGAG.........................................................................................................................1911.001.001.00------------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCATT..........................................................................................................................2311.0014.00-------1.00-----------------------------------------------------------------------------------------------------------------------------
......................ACCCAGCCTGGGGGAGTC...........................................................................................................................................................181.000.00-------------------------------------------1.00-----------------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAGTTT........................................................................................................................2411.005.001.00------------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAAAT.........................................................................................................................2411.0014.00---------------------1.00---------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAAAT.......................................................................................................................2611.00242.001.00------------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAGTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTCTGCCTCCTTCCTTCC..........................................................8711.001.00---------1.00---------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................GTCAGTACGTGTGCGCAGAGCTGC.......2411.001.00------------------------------------------------------------------------1.00------------------------------------------------------------
.....................................................AGGAGAGTTAGGTGGGCAGAAT........................................................................................................................221.000.00---------------------------------------------------------------------------------------------------------1.00---------------------------
.................TCATCACCCAGCCTGGGGGAAGAGAC........................................................................................................................................................2611.001.00--------------------------1.00----------------------------------------------------------------------------------------------------------
.....CCTACTGAGGAGTCATCACCCAGCCTGGGG................................................................................................................................................................3011.001.00-----------------------------------------------------------------------------------------------------------------------1.00-------------
..................................................GTAAGGAGAGTTAGGTGGGCATTTT........................................................................................................................2511.0014.001.00------------------------------------------------------------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAGAGTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTCTGCCTCCTTCCTTCCCCTTT.....................................................9111.003.00---------1.00---------------------------------------------------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCATTTA........................................................................................................................241.000.00----------------------1.00--------------------------------------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAA...........................................................................................................................211.000.00-----------------1.00-------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGTAAA.......................................................................................................................2611.00108.00----1.00--------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................TGCCTCCTTCCTTCCCCTTCTACA.................................................241.000.00-------------1.00-----------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................TCCAGGACACAAGTCAGTACGTGTGCGC...............2811.001.00------------------------------------------------------------------------------------------------------------------1.00------------------
..................................................GTAAGGAGAGTTAGGTGGGCCGA..........................................................................................................................2311.001.00---------------1.00---------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................CAAGTCAGTACGTGTGCGCAG.............2111.001.00--------------------------------------------------------------------------------------------------------------1.00----------------------
................................................................................................................................................................................GCGCAGAGCTGCAAGCTG.181.000.00-------------------------------------------1.00-----------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAC.........................................................................................................................2411.00242.00-------1.00-----------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAAAA.........................................................................................................................2411.0014.00--------------1.00----------------------------------------------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAGATT........................................................................................................................2411.0024.001.00------------------------------------------------------------------------------------------------------------------------------------
......................................................GGAGAGTTAGGTGGGCAGAGTTGGTGT..................................................................................................................2711.001.00----------------------------1.00--------------------------------------------------------------------------------------------------------
................................................................................................................................................................ACAAGTCAGTACGTGTGCGCAGAGCT.........2611.001.00--------------------------------------1.00----------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGC.............................................................................................................................2011.001.00---------------------1.00---------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAAGT.......................................................................................................................2611.00242.001.00------------------------------------------------------------------------------------------------------------------------------------
...................ATCACCCAGCCTGGGGGAAGAGAC........................................................................................................................................................2411.001.00--------------------------------------------1.00----------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGAA.............................................................................................................................2011.0016.00-----------------------1.00-------------------------------------------------------------------------------------------------------------
....................................................................................ACTTTCTGAGCTGGCCTGGGGTG........................................................................................2311.001.00----------------------------------------------------1.00--------------------------------------------------------------------------------
...................................................TAAGGAGAGTTAGGTGGGCAAA..........................................................................................................................221.000.00----------1.00--------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAGTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTCTGCCTCCTT................................................................8111.001.00---------1.00---------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGAGTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTCTGCCTCCTTCCTT............................................................8511.001.00---------1.00---------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAGATAAT......................................................................................................................2711.00242.001.00------------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCCGG..........................................................................................................................2311.001.00------------------------------------------------1.00------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGCAGT...........................................................................................................................2211.0016.001.00------------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGTGCA............................................................................................................................211.000.00-----1.00-------------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGGAGAGTTAGGTGGGCAATT.........................................................................................................................2411.0014.00-----1.00-------------------------------------------------------------------------------------------------------------------------------
....................................................................................ACTTTCTGAGCTGGCCTGGGG..........................................................................................2120.500.50-----------------------------------------------------------------------------------------------------------------------------------0.50-
................................GGGGAAGAGACAGGCCTG.................................................................................................................................................1820.500.50--------------------------------0.50----------------------------------------------------------------------------------------------------
.........................................................GAGTTAGGTGGGCAGAGT........................................................................................................................1820.500.50----------------------------------------------------------------------------------------------------------------------------------0.50--

Antisense strand
CCCCTCCTACTGAGGAGTCATCACCCAGCCTGGGGGAAGAGACAGGCCTGGTAAGGAGAGTTAGGTGGGCAGAGTTGGTGTGGTACTTTCTGAGCTGGCCTGGGGTGAGCTCACCTGTCCTCTGCCTCCTTCCTTCCCCTTCTAGCAACGGTTCCAGGACACAAGTCAGTACGTGTGCGCAGAGCTGCAAGCCCT
......................................................((..((..(((.((((((((..(((............(((((.(((...))).))))))))....)))))))))))..))..)).........................................................
..................................................51............................................................................................145................................................
SizePerfect hitTotal NormPerfect NormSRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		mjTestesWT1()
Testes Data. (testes)		SRR073954(GSM629280)
total RNA. (blood)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesWT4()
Testes Data. (testes)		SRR073955(GSM629281)
total RNA. (blood)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		mjLiverWT3()
Liver Data. (liver)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR060845(GSM561991)
total RNA. (brain)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR065048(SRR065048)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		mjTestesWT3()
Testes Data. (testes)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR037910(GSM510447)
newborn_rep3. (total RNA)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR095855BC2(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		mjTestesWT2()
Testes Data. (testes)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR065050(SRR065050)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR095855BC3(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)		SRR206942(GSM723283)
other. (brain)		SRR065046(SRR065046)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR059776(GSM562838)
MEF_Dicer. (MEF)		SRR042476(GSM539868)
mouse heart tissue [09-002]. (heart)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR095855BC10(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR014234(GSM319958)
Ovary total. (ovary)		SRR037923(GSM510461)
e9p5_rep1. (embryo)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR037909(GSM510446)
newborn_rep2. (total RNA)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR042479(GSM539871)
mouse liver tissue [09-002]. (liver)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR037927(GSM510465)
e7p5_rep1. (embryo)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
.....................................................................................................................TCCTCTGCCTCCTTCA.............................................................. 162.000.00--------1.00---------------------------------------------------------------------------------------1.00------------------------------------
........................................................................................................................TCTGCCTCCTTCCTTTGTA........................................................ 191.000.00---------------------------------------------------------------------1.00---------------------------------------------------------------
.................................................................................................................................TTCCTTCCCCTTCTACTG................................................ 181.000.00--------------------------------------------------------------------------------1.00----------------------------------------------------
..............................................................................................................TCACCTGTCCTCTGCCCCGA................................................................. 201.000.00---------------------------------------------------------------------1.00---------------------------------------------------------------
.........................................................................GTTGGTGTGGTACTTCCA........................................................................................................ 181.000.00----------------------------------------------------------------------1.00--------------------------------------------------------------
.........................................................................GTTGGTGTGGTACTTCA......................................................................................................... 171.000.00-----------------------------1.00-------------------------------------------------------------------------------------------------------
.................................................................TGGGCAGAGTTGGTGTA................................................................................................................. 171.000.00-------------------------------------------------------------------------------------------1.00-----------------------------------------
....................................................................................................................GTCCTCTGCCTCCTTCGA............................................................. 181.000.00-----------------------------------------------------------------------------------------------------------------1.00-------------------
............................................................................................................................CCTCCTTCCTTCCCCTGGCA................................................... 201.000.00----------------------------------------------1.00--------------------------------------------------------------------------------------
.................................................................................................................................TTCCTTCCCCTTCTAATG................................................ 181.000.00-------------------------------------------1.00-----------------------------------------------------------------------------------------
......................................................................................................................CCTCTGCCTCCTTCCTTCAG......................................................... 201.000.00-------------------------1.00-----------------------------------------------------------------------------------------------------------
..........................................................................................................................TGCCTCCTTCCTTCCCCT....................................................... 18100.100.10------------------------------------------------------------------------------------------------------------------------------------0.10