ID: uc008fzu.10
GENE: Adrbk1(11)
chr19:4290476-4290653-


(1)
AGO.mut 		(9)
AGO2.ip 		(2)
AGO3.ip 		(12)
B-CELL 		(15)
BRAIN 		(4)
CELL-LINE 		(1)
DCR.mut 		(2)
DGCR8.mut 		(11)
EMBRYO 		(5)
ESC 		(3)
FIBROBLAST 		(1)
KIDNEY 		(5)
LIVER 		(1)
LUNG 		(3)
LYMPH 		(13)
OTHER 		(5)
OTHER.mut 		(1)
PIWI.ip 		(3)
SKIN 		(8)
SPLEEN 		(12)
TESTES 		(2)
THYMUS 		(1)
TOTAL-RNA

Sense strand
TGCATTCCACACACCAGACAAGCTCAGCTTCATCCTGGACCTCATGAACGGTGAGCTCGGCCCTAGGGGGTGGACCTAGGGCTGGACCTGGGCAGGAAGCTGAGTCTTACCTGGGGGCTACCCCTCAGGTGGGGACCTGCACTACCACCTGTCTCAGCATGGAGTCTTCTCTGAAGCC
..........................................................................((((((......))))))(((....)))........(((((((....)))))))..................................................
.......................................................................72......................................................128................................................
SizePerfect hitTotal NormPerfect NormmjLiverWT1()
Liver Data. (liver)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesWT4()
Testes Data. (testes)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		mjTestesWT2()
Testes Data. (testes)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR059771(GSM562833)
CD4_control. (spleen)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		GSM475281(GSM475281)
total RNA. (testes)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR073954(GSM629280)
total RNA. (blood)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		mjTestesWT3()
Testes Data. (testes)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR037930(GSM510468)
e7p5_rep4. (embryo)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
............................................................................TAGGGCTGGACCTGGGCAGGA.................................................................................21119.0019.00----3.00-6.001.00-3.00--------1.00------------1.002.00--------------------1.00-1.00-------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGA............................................................................................23110.0010.00-2.001.00-----4.00-------------------1.00---------1.00---1.00--------------------------------------------------------
..................................CTGGACCTCATGAACG................................................................................................................................1619.009.008.00-------------------------------------------------------1.00------------------------------------------
............................................................................TAGGGCTGGACCTGGGCAGGAAAA..............................................................................2416.001.00---6.00-----------------------------------------------------------------------------------------------
.........................................................................................................CTTACCTGGGGGCTACCCCTCAGT.................................................2416.002.00-----------1.00---------3.00---------------1.00------1.00------------------------------------------------------
............................................................................................................................................................GCATGGAGTCTTCTCTGAAGC.2115.005.00-----5.00---------------------------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTG..............................................................................................2114.004.00----------1.00--1.00-1.00-----------------------------------------------------1.00-----------------------------
............................................................................TAGGGCTGGACCTGGGCAGGAAT...............................................................................2314.001.00-----------1.001.00----------------------1.00-----------------------------------1.00---------------------------
.........................................................................................................CTTACCTGGGGGCTACCCCTCA...................................................2214.004.00----3.00---------1.00------------------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGA.............................................................................................2214.004.00-----------------1.00------1.00-----------1.00-----------------------------------------------1.00--------------
...................................TGGACCTCATGAACGGTG.............................................................................................................................1814.004.00----------1.00--------3.00-------------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCT...............................................................................................2014.004.00---------------------------------------1.00----------1.00--------------------------------1.00---1.00-----------
...............................................................TAGGGGGTGGACCTAGGGCTGGAA...........................................................................................2414.0010.00---------------------------------------------------1.00-----------------------1.00---1.00------------1.00------
...............................................................TAGGGGGTGGACCTAGGGCTGG.............................................................................................2213.003.00-------1.00---1.00-------------------1.00-------------------------------------------------------------------
..................................................................................TGGACCTGGGCAGGAAGCTGAG..........................................................................2213.003.00----------------------------1.00------------1.00------------------------------1.00--------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGAC...........................................................................................2413.003.00---------------3.00-----------------------------------------------------------------------------------
.................................CCTGGACCTCATGAACG................................................................................................................................1713.003.00-------------------------------------------2.00--------------------------------1.00----------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGAAT..........................................................................................2513.0010.00---1.00-------1.00----------------------------------------------------------------------------1.00----------
...............................................................TAGGGGGTGGACCTAGGGCTGT.............................................................................................2213.004.00----------------1.001.00----1.00----------------------------------------------------------------------------
.........................................................................................................CTTACCTGGGGGCTACCCCTCAG..................................................2312.002.00-----------------1.00----------------------------------1.00----------------------------------------------
............................................................................TAGGGCTGGACCTGGGCAG...................................................................................1912.002.00--1.00-------------------1.00----------------------------------------------------------------------------
.............................................................CCTAGGGGGTGGACCTAGGGCTGGACCTGGGCAGGAAGCTGAGTCTTACCTGGGGGCTACCCCTCAGTTT...............................................702.000.00------------------------------2.00--------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGACT..........................................................................................2512.003.00-1.00---------------------------------1.00---------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGC................................................................................................1912.002.00-1.00-----------1.00-------------------------------------------------------------------------------------
..........................................................................................................TTACCTGGGGGCTACCCCTCAGT.................................................2312.002.00--------------------2.00------------------------------------------------------------------------------
..........................................................................................................TTACCTGGGGGCTACCCCTCAG..................................................2212.002.00----------------------------------1.00---------------------------------1.00------------------------------
............................................................................TAGGGCTGGACCTGGGCAGG..................................................................................2012.002.00--1.00--1.00---------------------------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGAAA..........................................................................................2512.0010.00------------1.00--------------1.00-----------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGAAAA..........................................................................................2512.004.00-----------------------2.00---------------------------------------------------------------------------
.........................................................................................................CTTACCTGGGGGCTACCCCTCAGA.................................................2412.002.00----------------------------------1.00--------------------------------------------------1.00-------------
................................................................AGGGGGTGGACCTAGGGCTGGAAT..........................................................................................2412.001.00----------------------------------------1.00------------------1.00---------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGATAA.........................................................................................2611.0010.00-1.00-------------------------------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGC............................................................................................2311.003.00--------1.00------------------------------------------------------------------------------------------
....................................................................GGTGGACCTAGGGCTAAC............................................................................................181.000.00-------------------------------------------------------------1.00-------------------------------------
.....................................................................................ACCTGGGCAGGAAGCTGAGTCT.......................................................................2211.001.00------------------------1.00--------------------------------------------------------------------------
...........................................................................CTAGGGCTGGACCTGGGCAG...................................................................................2011.001.00---------1.00-----------------------------------------------------------------------------------------
..................................................................................TGGACCTGGGCAGGAAGCTGAGC.........................................................................2311.003.00----------------1.00----------------------------------------------------------------------------------
...................AAGCTCAGCTTCATCCTGGACCT........................................................................................................................................2311.001.00-------------------------------------------------------------------------1.00-------------------------
............................................................................TAGGGCTGGACCTGGGCAGGAATT..............................................................................2411.001.00--------------------1.00------------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGG............................................................................................2311.003.00---------------------------------------------------------1.00-----------------------------------------
.............................TCATCCTGGACCTCATGAACGGTGGGAA.........................................................................................................................281.000.00------------------------------------------------1.00--------------------------------------------------
............................................................................TAGGGCTGGACCTGGGCAGGATAA..............................................................................2411.0019.00-----------1.00---------------------------------------------------------------------------------------
.........................AGCTTCATCCTGGACCTCATGAACGGT..............................................................................................................................2711.001.00-----------------------------------------------------------------------------1.00---------------------
.........................................................................................GGGCAGGAAGCTGAGTCG.......................................................................181.000.00---------------------------------------------1.00-----------------------------------------------------
...........................................................................CTAGGGCTGGACCTGGGCAGGA.................................................................................2211.001.00------------------1.00--------------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGACTTT........................................................................................2711.003.00-----------------------1.00---------------------------------------------------------------------------
............................................................................TAGGGCTGGACCTGGGCAGGAAGAA.............................................................................251.000.00--1.00------------------------------------------------------------------------------------------------
................................................................AGGGGGTGGACCTAGGGCTGGACA..........................................................................................2411.001.00-------------------------------------------------------------------1.00-------------------------------
..........................................................................................................TTACCTGGGGGCTACCCCTCAGTA................................................2411.002.00-----------------1.00---------------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGAT...........................................................................................2411.0010.00------------------------1.00--------------------------------------------------------------------------
.........................................................................................................CTTACCTGGGGGCTACCCCTCCA..................................................231.000.00--------------1.00------------------------------------------------------------------------------------
.....TCCACACACCAGACAAGCTCAGCTTA...................................................................................................................................................261.000.00------------1.00--------------------------------------------------------------------------------------
....TTCCACACACCAGACAAGCTCAGCTTC...................................................................................................................................................2711.001.00------------------------------------------------------1.00--------------------------------------------
..................................................GTGAGCTCGGCCCTAGGGG.............................................................................................................1911.001.00-1.00-------------------------------------------------------------------------------------------------
..........................................................................................................TTACCTGGGGGCTACCCCTCAGTT................................................2411.002.00-----------------------------------------------------------------------------------------1.00---------
...............................................................TAGGGGGTGGACCTAGGGCTGTAA...........................................................................................2411.004.00---------------------------1.00-----------------------------------------------------------------------
....................................GGACCTCATGAACGGTGGG...........................................................................................................................191.000.00----------------------1.00----------------------------------------------------------------------------
................................................................AGGGGGTGGACCTAGGGCT...............................................................................................1911.001.00-----------------------------1.00---------------------------------------------------------------------
.........................................................................................................CTTACCTGGGGGCTACCCCTCAAT.................................................2411.004.00------------------------------------------------------------------------------------------1.00--------
.................................................................................CTGGACCTGGGCAGGAAG...............................................................................1811.001.00--------------------------1.00------------------------------------------------------------------------
.........................................................................................................CTTACCTGGGGGCTACCCCTAG...................................................221.000.00--1.00------------------------------------------------------------------------------------------------
....................AGCTCAGCTTCATCCTGGA...........................................................................................................................................1911.001.00----------1.00----------------------------------------------------------------------------------------
....................................GGACCTCATGAACGGTGG............................................................................................................................181.000.00-----------------------------------------------------------------1.00---------------------------------
...............................................................TAGGGGGTGGACCTAGGGATT..............................................................................................211.000.00-------------1.00-------------------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTTA.............................................................................................2211.004.00-------1.00-------------------------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGAAGT.........................................................................................2611.0010.00----------------------------------------------------------1.00----------------------------------------
................................TCCTGGACCTCATGAACG................................................................................................................................1811.001.00--------------1.00------------------------------------------------------------------------------------
.................................CCTGGACCTCATGAACGGT..............................................................................................................................1911.001.00---------------------------------------------------------------------------------1.00-----------------
............................................................................TAGGGCTGGACCTGGGCAGGAAAAAA............................................................................2611.001.00-------------1.00-------------------------------------------------------------------------------------
.............................TCATCCTGGACCTCATGAAC.................................................................................................................................2011.001.00-----------------------------------------1.00---------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTAAAT...........................................................................................2411.004.00---------------------------------1.00-----------------------------------------------------------------
................................................................AGGGGGTGGACCTAGGGCTGGACT..........................................................................................2411.001.00------------------------------------1.00--------------------------------------------------------------
..................................................................................................................................................ACCTGTCTCAGCATGGAGT.............1911.001.00------------------1.00--------------------------------------------------------------------------------
...........................................................................CTAGGGCTGGACCTGGGCAGGAAA...............................................................................241.000.00-------------------------------------------------------------------------------------------1.00-------
.................ACAAGCTCAGCTTCATCCT..............................................................................................................................................1911.001.00------------1.00--------------------------------------------------------------------------------------
................................................................AGGGGGTGGACCTAGGGCTGGAC...........................................................................................2311.001.00-------1.00-------------------------------------------------------------------------------------------
...............................ATCCTGGACCTCATGAACGGTG.............................................................................................................................2211.001.00----------1.00----------------------------------------------------------------------------------------
.................ACAAGCTCAGCTTCATCCTGGACCTC.......................................................................................................................................2611.001.00----------------------------------------------------------------------------------1.00----------------
...............................................................TAGGGGGTGGACCTAGGGCTGGT............................................................................................2311.003.00-------1.00-------------------------------------------------------------------------------------------
.................................................................GGGGGTGGACCTAGGGCTGGAAT..........................................................................................231.000.00----------------------------------------------1.00----------------------------------------------------
............................................................................TAGGGCTGGACCTGGGCAGGAA................................................................................2211.001.00--------------------------------------1.00------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGTC...........................................................................................2411.003.00------------------------------------------------------------1.00--------------------------------------
.........................................................................................................CTTACCTGGGGGCTACCCCTCAGTATT..............................................2711.002.00--1.00------------------------------------------------------------------------------------------------
..................................CTGGACCTCATGAACGGTGAGCTCGGC.....................................................................................................................2711.001.00------------1.00--------------------------------------------------------------------------------------
.................................................................................................................GGGGCTACCCCTCAGCTGG..............................................191.000.00--------------------------------------------------------------------------------1.00------------------
..........................................................................................................TTACCTGGGGGCTACCCCTCAGA.................................................2311.002.00---------------------------------------1.00-----------------------------------------------------------
.............CCAGACAAGCTCAGCTTCATCCTGGAA..........................................................................................................................................271.000.00--------------------------------------------------------------1.00------------------------------------
..........................GCTTCATCCTGGACCTCATGAACGG...............................................................................................................................2511.001.00-------------------------1.00-------------------------------------------------------------------------
.GCATTCCACACACCAGACAAGCTC.........................................................................................................................................................2411.001.00--------------------------1.00------------------------------------------------------------------------
..........ACACCAGACAAGCTCAGCTATTT.................................................................................................................................................231.000.00-------------------------1.00-------------------------------------------------------------------------
................................................................AGGGGGTGGACCTAGGGCTGG.............................................................................................2111.001.00----------------1.00----------------------------------------------------------------------------------
......................................................................................CCTGGGCAGGAAGCTGAGTCTTA.....................................................................2311.001.00---------------------------------1.00-----------------------------------------------------------------
...............................ATCCTGGACCTCATGAACGG...............................................................................................................................2011.001.00-----------------------------1.00---------------------------------------------------------------------
..........................................................................................................TTACCTGGGGGCTACCCCTCA...................................................2111.001.00----------------------------------------------------------------1.00----------------------------------
...............................ATCCTGGACCTCATGAACGGTGG............................................................................................................................2311.001.00-----------------------------------------------1.00---------------------------------------------------
............................................................................TAGGGCTGGACCTGGGCAGGAT................................................................................2211.0019.00------------------------------------------------------------------------------1.00--------------------
...............................................................TAGGGGGTGGACCTAGGGCTGTAT...........................................................................................2411.004.00-------1.00-------------------------------------------------------------------------------------------
.........................................................................................................CTTACCTGGGGGCTACCCCTCT...................................................221.000.00--------------------------------------------------------------------------------------1.00------------
...................................TGGACCTCATGAACGGTGGGG..........................................................................................................................2111.004.00--------------------------------------------------------------------------1.00------------------------
....................................................................................GACCTGGGCAGGAAGCTTAG..........................................................................201.000.00----------1.00----------------------------------------------------------------------------------------
............................................................................TAGGGCTGGACCTGGGCAGGCAT...............................................................................2311.002.00------------------------------------------------------------------1.00--------------------------------
..............................................................................................................................................TACCACCTGTCTCAGCATGGAGTCT...........2511.001.00-------------------------------------1.00-------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGTT............................................................................................2311.004.00----------------------------------------1.00----------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTAAA............................................................................................2311.004.00----------------1.00----------------------------------------------------------------------------------
.................ACAAGCTCAGCTTCATCCTGGACCTCATGAACG................................................................................................................................3311.001.00-1.00-------------------------------------------------------------------------------------------------
...............................................................TAGGGGGTGGACCTAGGGCTGGACTAG........................................................................................2711.003.00-1.00-------------------------------------------------------------------------------------------------
............................................................................TAGGGCTGGACCTGGGCAGGAAA...............................................................................2311.001.00---------1.00-----------------------------------------------------------------------------------------
................................................................AGGGGGTGGACCTAGGGCTGGA............................................................................................2211.001.00------------------------------------------1.00--------------------------------------------------------
...........................................................................................GCAGGAAGCTGAGTCTAG.....................................................................181.000.00----------------------------------------------------------------------1.00----------------------------
.........................................................................................................CTTACCTGGGGGCTACCCCTCAA..................................................2311.004.00--------------1.00------------------------------------------------------------------------------------
............................................................................TAGGGCTGGACCTGGGCAGGTCG...............................................................................2311.002.00--1.00------------------------------------------------------------------------------------------------
..................................................................................TGGACCTGGGCAGGAAG...............................................................................1730.670.67--------------------------------------------0.33---------------------------------------------------0.33--
..................................................................GGGGTGGACCTAGGGC................................................................................................1620.500.50--------------------------------------------0.50------------------------------------------------------
................................................CGGTGAGCTCGGCC....................................................................................................................1420.500.50---------------------------------------------0.50-----------------------------------------------------
......................................................................................CCTGGGCAGGAAGCTGAGTC........................................................................2020.500.50-----------------------------------------------------------------------------------------------0.50---
..................................................................GGGGTGGACCTAGGG.................................................................................................1560.170.17--------------------------------------------------------------------------------------------------0.17

Antisense strand
TGCATTCCACACACCAGACAAGCTCAGCTTCATCCTGGACCTCATGAACGGTGAGCTCGGCCCTAGGGGGTGGACCTAGGGCTGGACCTGGGCAGGAAGCTGAGTCTTACCTGGGGGCTACCCCTCAGGTGGGGACCTGCACTACCACCTGTCTCAGCATGGAGTCTTCTCTGAAGCC
..........................................................................((((((......))))))(((....)))........(((((((....)))))))..................................................
.......................................................................72......................................................128................................................
SizePerfect hitTotal NormPerfect NormmjLiverWT1()
Liver Data. (liver)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		mjTestesWT4()
Testes Data. (testes)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		mjTestesWT2()
Testes Data. (testes)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR059771(GSM562833)
CD4_control. (spleen)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		GSM475281(GSM475281)
total RNA. (testes)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR073954(GSM629280)
total RNA. (blood)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		mjTestesWT3()
Testes Data. (testes)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR037930(GSM510468)
e7p5_rep4. (embryo)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
.....................GCTCAGCTTCATCCTCAA........................................................................................................................................... 181.000.00---------------------------------------------------------------1.00-----------------------------------
.........................AGCTTCATCCTGGACT......................................................................................................................................... 160.400.00---------------------------------------------------------------------------------------------0.40-----
.........................AGCTTCATCCTGGAC.......................................................................................................................................... 1550.200.20---------------------------------------------------------------------------------------------0.20-----
.........................AGCTTCATCCTGGACAC........................................................................................................................................ 170.200.00----------------------------------------------------------------------------------------------0.20----
.........................AGCTTCATCCTGGACTGGG...................................................................................................................................... 190.200.00-------------------------------------------------------------------------------------------------0.20-
.........................AGCTTCATCCTGGACAAA....................................................................................................................................... 180.200.00----------------------------------------------------------------------------------------------0.20----
.........................AGCTTCATCCTGGACAAG....................................................................................................................................... 180.200.00----------------------------------------------------------------------------------------------0.20----