ID: uc008cua.4
GENE: Ppp2r5d(10)
chr17:46822329-46822517-


(3)
AGO1.ip 		(11)
AGO2.ip 		(10)
B-CELL 		(26)
BRAIN 		(1)
CELL-LINE 		(1)
DGCR8.mut 		(9)
EMBRYO 		(7)
ESC 		(5)
FIBROBLAST 		(2)
HEART 		(1)
KIDNEY 		(5)
LIVER 		(2)
LUNG 		(5)
LYMPH 		(23)
OTHER 		(8)
OTHER.mut 		(1)
OVARY 		(2)
PANCREAS 		(5)
PIWI.ip 		(3)
PIWI.mut 		(2)
SKIN 		(8)
SPLEEN 		(31)
TESTES 		(2)
THYMUS 		(1)
TOTAL-RNA 		(2)
UTERUS

Sense strand
AGCCGCTCTTCCGCCAGCTTGCCAAATGTGTTTCCAGCCCCCATTTCCAGGTAAGAGCAGACTCACTGGTTCCTAGGTTTGGTAGAGCAGGTGTTGAGAATTGCAGTGAGTGCCCACTCAACTCCACTCTCCTCGCCAGGTGGCGGAGCGCGCCCTCTACTACTGGAACAATGAGTACATCATGAGCCT
...........................................................................(((..((.((((..((.((((((....(((.....)))...)))))).)).))))))..)))....................................................
....................................................................69....................................................................139................................................
SizePerfect hitTotal NormPerfect NormSRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		mjTestesWT4()
Testes Data. (testes)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		mjTestesWT1()
Testes Data. (testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		mjTestesWT3()
Testes Data. (testes)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		mjTestesWT2()
Testes Data. (testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR525243(SRA056111/SRX170319)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR206941(GSM723282)
other. (brain)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR206942(GSM723283)
other. (brain)		SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		GSM509276(GSM509276)
small RNA cloning by length. (testes)		SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)		SRR345206(SRX097267)
source: size fractionated RNA from mouse hipp. (brain)		SRR042481(GSM539873)
mouse pancreatic tissue [09-002]. (pancreas)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR038741(GSM527276)
small RNA-Seq. (brain)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR065045(SRR065045)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR073955(GSM629281)
total RNA. (blood)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		SRR525239(SRA056111/SRX170315)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (salivary gland)		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		GSM361430(GSM361430)
WholeCerebellum_1month_Ptc+-_Ink4c--_rep2. (brain)
.........................................................................TAGGTTTGGTAGAGCAGGTGTTGA............................................................................................241114.00114.006.007.006.003.00-3.002.005.007.0012.001.00-2.004.009.001.001.00-3.002.00-1.001.001.00--2.00-1.001.00--3.001.00--2.002.001.00---1.001.00-1.001.00--------1.00---1.00-2.001.00-1.00----1.001.00---2.001.00-1.00-1.00---1.001.00-------1.00-----1.00--1.00-----------1.001.00------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTGA............................................................................................231107.00107.0014.001.003.003.00--4.003.001.00-1.003.001.004.00-3.002.00-2.001.00-3.002.002.004.00-2.001.00-2.00-3.00-1.00-1.001.00--2.00-2.00-1.00----2.00---1.001.001.001.001.00-2.00-1.001.00-----2.001.001.001.00-------1.00--1.002.001.00--1.00--2.00-------1.00-1.00-----------1.00---1.00---1.001.00------------1.001.00------1.001.00--
.........................................................................TAGGTTTGGTAGAGCAGGTGTTG.............................................................................................23156.0056.005.004.00-5.00-2.001.001.00----4.00---2.007.00-1.002.001.002.001.00--------1.00--1.001.00-1.002.00---------1.001.00----1.00-2.00----------1.00---1.00-----1.00------------1.00-----------------1.00--------------1.00--------------1.00-----
..........................................................................AGGTTTGGTAGAGCAGGTGTTGAG...........................................................................................24115.0015.001.00-------4.00--------------1.00---1.00----1.00----1.00-----1.00--------1.00-----------------------1.001.00------------------------------1.00----------------------------------1.00-
..........................................................................AGGTTTGGTAGAGCAGGTGTTG.............................................................................................22115.0015.002.00----------1.001.00--1.00--1.001.00-------------1.00-------1.00------1.00----------1.00--------------------1.00--------------1.00---------------------------1.00-------------1.00-------
.........................................................................TAGGTTTGGTAGAGCAGGTGTTGT............................................................................................24113.0056.004.001.00-----1.00--1.00----1.00-------------------------------------1.00---1.00--------------1.00-------1.00-------------------------------1.00--------------------------------
.......................................................................................................................AACTCCACTCTCCTCGCCAGT.................................................21110.001.00------1.00-----------------------------------------------2.00-------2.00--------1.00-------------1.00------------------1.00----------------1.00--------1.00--------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTT..............................................................................................2219.009.002.00------1.00-------1.00-------------------1.00-----------------------1.00----1.00----------------1.00------------------------------------------------------1.00--------
................................................................................................................................................................TACTGGAACAATGAGTACATCATGAGC..2719.009.00--7.00-------------1.00-----------1.00--------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................ACTGGAACAATGAGTACATCAT......2218.008.00-----3.00----4.00--------------------------------------------------------------------------------------------------------------------1.00-----------------
.........................................................................TAGGTTTGGTAGAGCAGGTGT...............................................................................................2118.008.00---1.00--------------1.001.00----------------------------------------1.00------------2.00-------------------1.00------1.00--------------------------------------------
......................................................................................................................CAACTCCACTCTCCTCGCCAGT.................................................227.000.00------1.00-----1.00----------------1.00-----------1.00-------------------------------------------1.00----------------1.00--------------------------1.00---------------
........................................................................CTAGGTTTGGTAGAGCAGGTGTTG.............................................................................................2416.006.00---------------1.00--------------5.00------------------------------------------------------------------------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTA..............................................................................................2216.008.00--------------------5.00--------------------------------------------------------------------------------------1.00-------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTGT............................................................................................2316.0015.001.00--------------1.00---1.00-1.00--1.00---------1.00--------------------------------------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTGAGT..........................................................................................2516.0015.00-1.00---------------------------------1.00----------1.00--1.00-1.001.00--------------------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTGAGA..........................................................................................2515.005.00----5.00--------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTT..............................................................................................2115.005.00-----------1.00------------------------------1.00----3.00-------------------------------------------------------------------------------------------------
.....................................................................................AGCAGGTGTTGAGAATCAGG....................................................................................204.000.00----------------------------------------2.00---1.00-----------------------------------------------------------------1.00----------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTTA.............................................................................................2314.009.00-----------2.00------------1.00-----------------------------------------------------------------------------------------------------------1.00------------
........................................................................................AGGTGTTGAGAATTGCAGTGAG...............................................................................2213.003.00----1.00--------1.00--------------------------------------------------------------------------------------------------------1.00--------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTTGAAA..........................................................................................2613.00114.00---------------------------------------------1.00-----1.00----------------------------------------------------------------------------1.00----------------
...............................................................................TGGTAGAGCAGGTGTTGAGAATT.......................................................................................2313.003.00---------------------------------1.001.00----------------------------------------------------------------------1.00---------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTTGAG...........................................................................................2513.003.00-----------------------------1.00-2.00-----------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................ACTGGAACAATGAGTACATC........2013.003.00----------2.00---------------1.00----------------------------------------------------------------------------------------------------------------------
...............................................................................TGGTAGAGCAGGTGTTGAGAATTG......................................................................................2412.002.00---------------------------------1.00-----------------1.00---------------------------------------------------------------------------------------------
......................................................................................................................CAACTCCACTCTCCTCGCCAGA.................................................222.000.00------1.00-------------------------------------------------1.00----------------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTGAA...........................................................................................2412.00107.00----------------------------------1.00-------------------------------------------------------------1.00------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTTTTG.............................................................................................232.000.001.00-----------------------------------------------------------------------------------1.00------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTGAT...........................................................................................2412.00107.00--------------------------------------1.00-----------1.00----------------------------------------------------------------------------------------------
...............................................................................TGGTAGAGCAGGTGTTGAGAAT........................................................................................2212.002.00-----1.00----------------------------------------------------------------------------------------1.00--------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTTTT............................................................................................2412.009.00-------1.00------------------------------------------------------------------------------------------------------------------1.00----------------------
................................................................................................................................................................TACTGGAACAATGAGTACATCATGAGCC.2812.002.00----------------2.00--------------------------------------------------------------------------------------------------------------------------------
.......................................................................CCTAGGTTTGGTAGAGCAGGTGT...............................................................................................2312.002.00-------------------1.00------------------1.00----------------------------------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTAA............................................................................................2312.005.00------1.00--------------------------------------------------------1.00---------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTGGA............................................................................................2312.001.00-----------------------------------------------------1.00--------------------------------1.00----------------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTTGAA...........................................................................................2512.00114.00------------------------------------------1.00--------------------------------1.00---------------------------------------------------------------------
.................................................................................................................................................................ACTGGAACAATGAGTACAT.........1912.002.00----------1.00-------------------------------------------------------------------------------1.00------------------------------------------------------
.....................................................................................AGCAGGTGTTGAGAATCAG.....................................................................................192.000.00--------------------------------------------2.00----------------------------------------------------------------------------------------------------
................................................................................................................................................................TACTGGAACAATGAGTACATCATGAGCCT2912.002.00-------------------------1.00-------------------------------------------------------------1.00---------------------------------------------------------
....................................................................................................................................................................GGAACAATGAGTACATCAT......1912.002.00-----2.00-------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTG................................................................................................2012.002.00------------------------------------------1.00--------------------------------------------------------------------------------------------1.00---------
..........................................................................AGGTTTGGTAGAGCAGGTGTTTT............................................................................................2311.005.001.00------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGG..................................................................................................1811.001.00----------------------------------------------------------------------------------------------------------1.00--------------------------------------
.......................................................................................................................AACTCCACTCTCCTCGCCAGA.................................................2111.001.00----------1.00--------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................GGCGGAGCGCGCCCTCTACTACT.........................2311.001.00--------------------------------------------------------------------------------------------------------------------1.00----------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTTGAGA..........................................................................................2611.001.00----------------------------1.00--------------------------------------------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTGAAAA.........................................................................................2611.00107.00-----------1.00-------------------------------------------------------------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTGAAAC.........................................................................................2611.00107.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTTT.............................................................................................2311.009.00----------------------------------1.00--------------------------------------------------------------------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTCG.............................................................................................2311.008.00-----------------1.00-------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................TACTGGAACAATGAGTACATCATGA....2511.001.00--------------------------------------------------------1.00----------------------------------------------------------------------------------------
.............................................................................TTTGGTAGAGCAGGTGTTGAGAATT.......................................................................................2511.001.00----------------------------------------------------------1.00--------------------------------------------------------------------------------------
.......................................................................................................................................CCAGGTGGCGGAGCGGTCT...................................191.000.00---------------------------1.00---------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................ACTACTGGAACAATGAGT.............1811.001.00--------------------------1.00----------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................TACTACTGGAACAATGAGTACATCATGAGC..3011.001.00----------------------------1.00--------------------------------------------------------------------------------------------------------------------
...........................................................................................................................CCACTCTCCTCGCCAGT.................................................171.000.00------------------------------------------------------------------------------------------------------------------------------1.00------------------
.......................................................................................................................AACTCCACTCTCCTCGCCAG..................................................2011.001.00-------------------------------------------------1.00-----------------------------------------------------------------------------------------------
...........................................................................GGTTTGGTAGAGCAGGTGTTGAG...........................................................................................2311.001.00------------------------------------------------------------------------------------------1.00------------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTAGA............................................................................................2411.008.00-------------------------------------1.00-----------------------------------------------------------------------------------------------------------
...........................................................................GGTTTGGTAGAGCAGGTGTTGA............................................................................................2211.001.00-----------1.00-------------------------------------------------------------------------------------------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTTGAT...........................................................................................2511.00114.00------------1.00------------------------------------------------------------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGATGA............................................................................................231.000.00-----------------------------------------------------------------1.00-------------------------------------------------------------------------------
...........................................................................................................................................................TCTACTACTGGAACAATGAGTACATC........2611.001.00----------------------------------------------------------------------------1.00--------------------------------------------------------------------
......................................................................TCCTAGGTTTGGTAGAGCAGGTGTT..............................................................................................2511.001.00-----------------------1.00-------------------------------------------------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTGAAT..........................................................................................2511.00107.00---------------1.00---------------------------------------------------------------------------------------------------------------------------------
...............................................................................TGGTAGAGCAGGTGTTGAGAATTGC.....................................................................................2511.001.00---1.00---------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................AACTCCACTCTCCTCGCCTGT.................................................211.000.00------1.00------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................TTGGTAGAGCAGGTGTCTC............................................................................................191.000.00----------------------------------------1.00--------------------------------------------------------------------------------------------------------
.................................................................................................................................................................ACTGGAACAATGAGTACATCATGA....2411.001.00----------------------1.00--------------------------------------------------------------------------------------------------------------------------
.......................................................................CCTAGGTTTGGTAGAGCAGGTGTTGA............................................................................................2611.001.00------------------1.00------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GCGGAGCGCGCCCTCGAC.............................181.000.00-----------------------------------------------------------------------1.00-------------------------------------------------------------------------
...........................................................................................................................................................................TGAGTACATCATGAGCC.1711.001.00---------------------------------------------1.00---------------------------------------------------------------------------------------------------
............................................................................GTTTGGTAGAGCAGGTGTTGAGA..........................................................................................2311.001.00---------------------------------------------------------------1.00---------------------------------------------------------------------------------
.........................................................................TAGGTTTGGTAGAGCAGGTGTTGAGTTCT.......................................................................................2911.003.00-1.00-----------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................AGGTGTTGAGAATTGCACT..................................................................................191.000.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................TGGTAGAGCAGGTGTTGAGAA.........................................................................................2111.001.00------------------------------------------------------------1.00------------------------------------------------------------------------------------
...............................................................................TGGTAGAGCAGGTGTTGAGAATTGCT....................................................................................2611.001.00------1.00------------------------------------------------------------------------------------------------------------------------------------------
........................................................................CTAGGTTTGGTAGAGCAGGTGT...............................................................................................2211.001.00-----------1.00-------------------------------------------------------------------------------------------------------------------------------------
..............................................................................TTGGTAGAGCAGGTGTTGAGAAT........................................................................................2311.001.00-------------------------------------------1.00-----------------------------------------------------------------------------------------------------
............................................................................................................................................TGGCGGAGCGCGCCCTCT...............................1811.001.00-------------1.00-----------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................GGTGGCGGAGCGCGCTCCT................................191.000.00----------------------------------------1.00--------------------------------------------------------------------------------------------------------
...................................................................................................................................................................TGGAACAATGAGTACATCATGAGCC.2511.001.00-----------------------------------------------------------------1.00-------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGT...............................................................................................2011.001.00---1.00---------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTAT............................................................................................2311.005.00----------------------------------1.00--------------------------------------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTTA............................................................................................2311.005.00---------------------1.00---------------------------------------------------------------------------------------------------------------------------
..................................................GTAAGAGCAGACTCACTGGTTCCTAG.................................................................................................................2611.001.00------------------------------------------------------------------------------------------------------------------------------------------1.00------
.........................................................................TAGGTTTGGTAGAGCAGGTGTTAGA...........................................................................................2511.009.001.00------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................GTTTGGTAGAGCAGGTGTTGAG...........................................................................................2211.001.00--------------------------------------------------1.00----------------------------------------------------------------------------------------------
............................................................................GTTTGGTAGAGCAGGTGTTGA............................................................................................2111.001.00----------------1.00--------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................TGGAACAATGAGTACATC........1820.500.50---0.50---------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................TACTGGAACAATGAGT.............1620.500.50---------------------------------------------------------------0.50---------------------------------------------------------------------------------

Antisense strand
AGCCGCTCTTCCGCCAGCTTGCCAAATGTGTTTCCAGCCCCCATTTCCAGGTAAGAGCAGACTCACTGGTTCCTAGGTTTGGTAGAGCAGGTGTTGAGAATTGCAGTGAGTGCCCACTCAACTCCACTCTCCTCGCCAGGTGGCGGAGCGCGCCCTCTACTACTGGAACAATGAGTACATCATGAGCCT
...........................................................................(((..((.((((..((.((((((....(((.....)))...)))))).)).))))))..)))....................................................
....................................................................69....................................................................139................................................
SizePerfect hitTotal NormPerfect NormSRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		mjTestesWT4()
Testes Data. (testes)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		mjTestesWT1()
Testes Data. (testes)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		mjTestesWT3()
Testes Data. (testes)		SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		mjTestesWT2()
Testes Data. (testes)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)		SRR014231(GSM319955)
16.5 dpc total. (testes)		SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR525243(SRA056111/SRX170319)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)		SRR206941(GSM723282)
other. (brain)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR206942(GSM723283)
other. (brain)		SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		GSM509275(GSM509275)
MitoPLD+/+ E16.5 small RNA. (testes)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		GSM509276(GSM509276)
small RNA cloning by length. (testes)		SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)		SRR345206(SRX097267)
source: size fractionated RNA from mouse hipp. (brain)		SRR042481(GSM539873)
mouse pancreatic tissue [09-002]. (pancreas)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR051941(GSM545785)
18-32 nt total small RNAs (Mov10l-/-). (mov10L testes)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR042486(GSM539878)
mouse ovaries [09-002]. (ovary)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR038741(GSM527276)
small RNA-Seq. (brain)		mjTestesKO5()
Testes Data. (Zcchc11 testes)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		SRR065045(SRR065045)
Tissue-specific Regulation of Mouse MicroRNA . (liver)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR073955(GSM629281)
total RNA. (blood)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)		SRR525239(SRA056111/SRX170315)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)		SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (salivary gland)		GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		GSM361430(GSM361430)
WholeCerebellum_1month_Ptc+-_Ink4c--_rep2. (brain)
.............................................................CTCACTGGTTCCTAGGTTTGGTAGA....................................................................................................... 2517.007.00----7.00--------------------------------------------------------------------------------------------------------------------------------------------
................................................AGGTAAGAGCAGACTCACTGGTTCCTA.................................................................................................................. 2715.005.00-------------------------1.00----------------------------------------1.00--------------------1.001.00---------------------------------------------------1.00----
.................................................GGTAAGAGCAGACTCACTGGTTCCTA.................................................................................................................. 2614.004.00-------------------------1.00----------------------------------------1.00----------------------------------------------------------1.00-----1.00-------------
........................................................................................................................................................CCCTCTACTACTGGAACAATGAGTACA.......... 2711.001.00----------------------------1.00--------------------------------------------------------------------------------------------------------------------
......................................................GAGCAGACTCACTGGTTCCTAGGTTTG............................................................................................................ 2711.001.00----------------------------------------------------------------------------------------1.00--------------------------------------------------------
...........................................................................................................................................................TCTACTACTGGAACAATGAGTACATCA....... 2711.001.00-------------------------1.00-----------------------------------------------------------------------------------------------------------------------
..........................................................................AGGTTTGGTAGAGCAGGTGTTGA............................................................................................ 2311.001.00------------------------------------------------------------------------------------------------------------------------------------------------1.00
.............................................................................................................................................GGCGGAGCGCGCCCTCTACTACTGGAACA................... 2911.001.00-------------------------1.00-----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................GCGCCCTCTACTACTGGAACAATGAG.............. 2611.001.00---------------------------1.00---------------------------------------------------------------------------------------------------------------------
...............AGCTTGCCAAATGTGTTTCCAGCCCCCA.................................................................................................................................................. 2811.001.00--------------1.00----------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GCGGAGCGCGCCCTCTACTACTGGAACA................... 281.000.00---------------------------1.00---------------------------------------------------------------------------------------------------------------------
....................................................................................................................CTCAACTCCACTCTCCTC....................................................... 1811.001.00-----1.00-------------------------------------------------------------------------------------------------------------------------------------------
...............................TTCCAGCCCCCATTTCCAGGTAAG...................................................................................................................................... 2411.001.00-------------------------------------------------------------------------------1.00-----------------------------------------------------------------
......................................................................................................................CAACTCCACTCTCCTCGC..................................................... 1811.001.00-------------------------------------------------------------------------------------------------------1.00-----------------------------------------
........TTCCGCCAGCTTGCCAAATGTGTTTCCA......................................................................................................................................................... 2811.001.00-------------------------1.00-----------------------------------------------------------------------------------------------------------------------
...........................................................GACTCACTGGTTCCTAGGTTTGGTA......................................................................................................... 2511.001.00---------------------------------------------------------------------------------------------------------------------1.00---------------------------
............................................................................................................................................................CTACTACTGGAACAATGAGTACATCA....... 2611.001.00----------------------------------------------1.00--------------------------------------------------------------------------------------------------