ID: uc008cjj.17
GENE: Ppp1r10(18)
chr17:36067787-36068143+


(1)
AGO.mut
(2)
AGO1.ip
(18)
AGO2.ip
(2)
AGO3.ip
(7)
B-CELL
(48)
BRAIN
(7)
CELL-LINE
(3)
DCR.mut
(2)
DGCR8.mut
(10)
EMBRYO
(5)
ESC
(4)
FIBROBLAST
(1)
HEART
(1)
KIDNEY
(10)
LIVER
(1)
LUNG
(2)
LYMPH
(25)
OTHER
(8)
OTHER.mut
(1)
PANCREAS
(4)
PIWI.ip
(3)
PIWI.mut
(6)
SKIN
(8)
SPLEEN
(24)
TESTES
(3)
THYMUS
(3)
TOTAL-RNA
(1)
UTERUS

Sense strand
TGGGGGAGGCGGCCACCGAGGGCATGATGGAGGCCACAGTCATGGAGGAGGTGAGGACATGCCCGAGGTCCCACATGCAGGACCTCAACATATCTGTGGGGCAGAGGGGGGAGGTGCAAAGGACAAGTTGTGGCTCCATCTCCTTAAGGCTCTCTATATACAAGGAAGGCAGTAACCACCTCCATCTTCACATCAACCCCCCAATACTGTGTATCTCTGAACACTTGGCCCCATTGCTCTGGATTGGGGTACGATGGTGATGGTGATCTCTTAGGTGTTTGTAACCATTCTGCCATTGTTCCCACAGACATGTCAAACCGCCCTGTCTGCCGACACTTCATGATGAAGGGCAACTGC
..............................................................................................................................................................................................................................................(((...(((((.((((((((((((((...................))))))..))))))))))))))))..................................................
.............................................................................................................................................................................................................................................238..................................................................307................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR306531(GSM750574)
19-24nt. (ago2 brain)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
GSM361408(GSM361408)
WholeCerebellum_P6_wt_rep1. (brain)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
mjTestesWT4()
Testes Data. (testes)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR059775(GSM562837)
MEF_Drosha. (MEF)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR037937(GSM510475)
293cand2. (cell line)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)
GSM314559(GSM314559)
ESC dgcr8 (454). (ESC)
SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)
SRR059765(GSM562827)
DN3_control. (thymus)
GSM361402(GSM361402)
CGNP_P6_p53--_Ink4c--_rep5. (brain)
SRR060845(GSM561991)
total RNA. (brain)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR059768(GSM562830)
Treg_control. (spleen)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
mjLiverWT3()
Liver Data. (liver)
GSM361430(GSM361430)
WholeCerebellum_1month_Ptc+-_Ink4c--_rep2. (brain)
SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR206939(GSM723280)
other. (brain)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
GSM361395(GSM361395)
CGNP_P6_wt_rep2. (brain)
SRR306538(GSM750581)
19-24nt. (ago2 brain)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR073955(GSM629281)
total RNA. (blood)
SRR306530(GSM750573)
19-24nt. (ago2 brain)
GSM361398(GSM361398)
CGNP_P6_p53--_Ink4c--_rep1. (brain)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)
SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR306529(GSM750572)
19-24nt. (ago2 brain)
SRR037905(GSM510441)
brain_rep2. (brain)
SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)
SRR525242(SRA056111/SRX170318)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)
SRR553603(SRX182809)
source: Spermatids. (Spermatids)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR037930(GSM510468)
e7p5_rep4. (embryo)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR553586(SRX182792)
source: Testis. (testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR553584(SRX182790)
source: Heart. (Heart)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
SRR014237(GSM319961)
10 dpp MILI-KO total. (mili testes)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR206941(GSM723282)
other. (brain)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR037907(GSM510443)
brain_rep4. (brain)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
mjTestesWT1()
Testes Data. (testes)
SRR037910(GSM510447)
newborn_rep3. (total RNA)
SRR059771(GSM562833)
CD4_control. (spleen)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
GSM261959(GSM261959)
oocytesmallRNA-19to30. (oocyte)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR042479(GSM539871)
mouse liver tissue [09-002]. (liver)
SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR306543(GSM750586)
19-24nt. (ago2 brain)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR038740(GSM527275)
small RNA-Seq. (dicer brain)
SRR206940(GSM723281)
other. (brain)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
GSM361415(GSM361415)
WholeCerebellum_P6_p53--_Ink4c--_rep4. (brain)
SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR037914(GSM510451)
newborn_rep7. (total RNA)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)
SRR037906(GSM510442)
brain_rep3. (brain)
GSM361407(GSM361407)
CGNP_P6_Ptc+-_Ink4c--_rep5. (brain)
SRR553585(SRX182791)
source: Kidney. (Kidney)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR059774(GSM562836)
MEF_control. (MEF)
SRR077866(GSM637803)
18-30 nt small RNAs. (liver)
mjTestesWT3()
Testes Data. (testes)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGGT.............................................................................................221153.00153.0021.0017.006.00-3.005.003.001.009.00-5.004.00-5.003.008.003.004.00-3.003.001.001.00--1.003.00-2.00-2.00-1.001.002.00-----1.00-2.00---1.00---2.001.00-----2.00--1.001.001.003.00--1.00-1.00--1.001.001.001.00-2.00------2.00-1.00----1.00----1.00----1.00------------1.001.00-------------1.00----------1.001.00------1.00---1.00---------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGGT.............................................................................................211126.00126.0014.004.0020.0022.009.004.00-10.002.00-2.001.00-1.001.001.004.00---4.002.001.00--1.002.00---1.001.00-1.001.00-1.00---2.00-2.00-----1.00-1.00-1.00-----------1.00-2.00-1.00---------1.00-----------------------------------------1.00---1.00-----------------1.00------------1.00-----------
....................................................................................................................................................................................................................................................TGGGGTACGATGGTGATGGTGA...........................................................................................221102.00102.005.009.009.00---2.004.002.00-1.003.0011.003.003.00--1.007.001.001.00--6.004.00--2.00-1.00-1.001.00-2.00---------1.00---1.001.00-1.00--1.00-1.00--1.00-1.00-------2.002.001.00----------1.00-----1.00------------------1.00-1.00--1.00---1.00--------1.00---1.00--------1.00--1.00-------------------------
....................................................................................................................................................................................................................................................TGGGGTACGATGGTGATGGT.............................................................................................20129.0029.002.00-4.002.004.00-4.00---2.00------1.00---------------------------3.00----------1.00-------1.00---1.00---1.00--------------------2.00-------------------------------------------------1.00-----------------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGGTGA...........................................................................................23124.0024.002.00----3.005.00--------1.00---1.00----------2.002.00------------1.00--------1.00------1.00----------------------------------1.002.00---1.001.00-----------------------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGGTA............................................................................................23117.00153.003.003.00-----2.00--1.00-----2.00-------------------1.00---------------1.001.00----1.00--------1.00-----1.00---------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGG..............................................................................................21117.0017.001.001.00---1.001.00------2.001.00------1.00------1.00---------------------------1.00----------------------1.00-1.00----2.00---------------------------------------------------------1.00---1.00---1.00--------------
....................................................................................................................................................................................................................................................TGGGGTACGATGGTGATGGTG............................................................................................21114.0014.00------1.00----1.00-----1.00---------------1.00-------4.00--1.00----------------1.001.00------------------1.00-----------------------------1.00---------------1.00---------------------------------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGG..............................................................................................20114.0014.00-1.00-1.005.00--------1.001.00------1.00------------------------1.00-1.00------1.00--------1.00------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGGTA............................................................................................22112.00126.00-2.001.00-1.001.00-------1.00-------1.00---1.00------1.00----2.00------------------------------------------------------------------------------------------------1.00--------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGGTT............................................................................................23111.00153.001.00----1.00-----1.00-------1.00-----1.00---1.00-------------1.00-------------------------------------------1.00---1.00-----------------------1.00------------------------------------------1.00--------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGGTAT...........................................................................................2419.00153.00-1.001.00--2.001.00----1.00----------------------------1.00------------------------------------------------1.00----------------------------1.00------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGGTG............................................................................................2317.007.00--------2.00-1.00----------------------------------------------------------1.00--------1.00-------------------------------1.00-------------------------1.00------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGGTTT...........................................................................................2417.00153.00-----2.00-----------------------1.00-----------------------1.00---1.00-----------------1.00----------------------------------------------------------------------1.00--------------------
.........................................................................................................................................................................................................................................TTGCTCTGGATTGGGGTACGATGGTGATGGTGATCTCTTAGGTGTTTGTAACCATTCTGCCATTGTTCCCACAG..................................................7416.006.00---------6.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGGTAA...........................................................................................2416.00153.00-----------1.00----------1.00------------------------------------------------------------------1.001.00---------------------------------------------------------------1.00-1.00----------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGGA.............................................................................................2216.0017.001.00---------1.00--------------------------1.00--------------------2.00-----------------------------------------------1.00------------------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATG...............................................................................................2016.006.00-----------------------------1.00---1.00---------------------1.00-------------------------------1.00----------1.00---------------------------------1.00----------------------------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGGTGT...........................................................................................2316.002.00-----1.001.00-----------------------------------------------1.001.00--------------------------------1.00------------1.00-----------------------------------------------------------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGGTT............................................................................................2215.00126.00----1.00--1.00----------------------------1.00-------------------------1.00-----------1.00--------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................CATTCTGCCATTGTTCCCACAGT.................................................2324.501.50--------------0.50------1.00--0.50-----------0.50----------------------1.00----------0.50---------------------------------------------------------------------------------------------0.50--
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGGTAG...........................................................................................2414.00153.001.00-----1.00---1.00--------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGGTAT...........................................................................................2314.00126.00--------------------------1.00----------------1.00-----------------------------------------1.00-------------------------------------------------------------------------1.00-------
..................................................................................................................................................................................................................................................................................GTGTTTGTAACCATTCTGCCATTGTTCCC......................................................2923.503.50-----------------------------------3.50-----------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGGTAA...........................................................................................2313.00126.00----1.00--------------------------------------------------------------------------1.00----------------------------------------------------------------------------------1.00----
....................................................................................................................................................................................................................................................TGGGGTACGATGGTGATGGTGAT..........................................................................................2313.003.00-----1.00-------------------------------1.00-------1.00-------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATG...............................................................................................1913.003.00--1.00--------------------------1.00----------------------------------------------------------------------------------------------------1.00------------------------------------
.................................................................................................................................................................................................................................................GATTGGGGTACGATGGTGATGGT.............................................................................................2313.003.001.00-1.00----1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................GGTACGATGGTGATGGTGA...........................................................................................1913.003.00-----------------2.00------------------1.00----------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................TGGGGTACGATGGTGATGGTGAA..........................................................................................2313.00102.00------------------2.00--------1.00-------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................GCTCTGGATTGGGGTACGATGGTGATGGTGATCTCTTAGGTGTTTGTAACCATTCTGCCATTGTTCCCACAG..................................................7212.002.00---------2.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................TGGGGTACGATGGTGAT................................................................................................1712.002.00--------------------------------2.00--------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGGTTTT..........................................................................................2512.00153.00-----------------------------1.00-------------------------------------1.00---------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................CTCTGGATTGGGGTACGATGGTGATGGTGATCTCTTAGGTGTTTGTAACCATTCTGCCATTGTTCCCACAG..................................................7112.002.00---------2.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................CTGGATTGGGGTACGATGGTGATGGTGATCTCTTAGGTGTTTGTAACCATTCTGCCATTGTTCCCACAG..................................................6912.002.00---------2.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................ATTCTGCCATTGTTCCCACAGT.................................................222.000.00----------------------------2.00------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGTT.............................................................................................2212.006.00-1.00-----------------1.00---------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGGC.............................................................................................2212.0017.00--------1.00-------------------------------------1.00------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................TGGGGTACGATGGTGATGG..............................................................................................1912.002.00---------------------------1.00---------------------------------------------------------------------------------------------------------------------------------1.00---------
........................................................................................................................................................................................................................................................................................................................TCAAACCGCCCTGTCTGCCGACAC.....................2412.002.00------------2.00----------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................GGGGTACGATGGTGATGGTGA...........................................................................................2112.002.00------------1.00--------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................ATACAAGGAAGGCAGCAGG.....................................................................................................................................................................................192.000.00-------------------------1.00-------------------------------------------------------------------------------------------------------------1.00-------------------------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGGTAG...........................................................................................2312.00126.001.00---------1.00------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGGTG............................................................................................2212.002.00------1.00-----------------------------------------------------------------------------------------------1.00----------------------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGGTGA...........................................................................................2412.002.00---------------------------------------------------------------------------------------------------1.00-------------------------------------------------1.00-----------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGGTTA...........................................................................................2312.00126.00---1.00--------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGGTTTT..........................................................................................2412.00126.00-----2.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................TGCCATTGTTCCCACAG..................................................1741.751.75-------------------------------------------------------------------------------------------------------1.75---------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................CATTCTGCCATTGTTCCCACAG..................................................2221.501.50-0.50---------------0.50------------------------------------------------------0.50----------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGGTC............................................................................................2211.00126.00-------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................GGCAGAGGGGGGAGGTTCT...............................................................................................................................................................................................................................................191.000.00----------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------
........................................................................................................AGGGGGGAGGTGCAAGAGG..........................................................................................................................................................................................................................................191.000.00---------------------------------------------------------------------------1.00-------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................TCTGCCATTGTTCCCACAGT.................................................201.000.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------1.00---
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGGTAGT..........................................................................................2511.00153.001.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................ATACAAGGAAGGCAGCAG......................................................................................................................................................................................181.000.00------------------------------------------------------------------------------------------------------------------------------------------------------1.00----------------
....................................................................................................................................................................................................................................................TGGGGTACGATGGTGATGCTGA...........................................................................................221.000.00---------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------------
....................................................................................................................................................................................................................................................TGGGGTACGATGGTGATGGTT............................................................................................2111.0029.00---1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGGTGT...........................................................................................2411.007.00-----1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................ATTGCTCTGGATTGGGGTACGATGGTGATGGTGAT..........................................................................................3511.001.00-------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................GTTGTGGCTCCATCTCCTTAAGGCTC.............................................................................................................................................................................................................2611.001.00--------------------------------------------------------------------------------------------------------------------------1.00--------------------------------------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGGTTAAT.........................................................................................2511.00126.00---------------------------------------------------------------------------------------------------1.00-------------------------------------------------------------------
...................................................................................................GGCAGAGGGGGGAGGTCA................................................................................................................................................................................................................................................181.000.00-----------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
................................GCCACAGTCATGGAGTCC...................................................................................................................................................................................................................................................................................................................181.000.00-----------------------------------------------1.00-----------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................GGTACGATGGTGATGGTAA...........................................................................................191.000.00-----------------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................TTGCTCTGGATTGGGGTACGATGGTGATGGTGATCTCTTAGGTGTTTGTAACCATTCTGCCATTGTTCCCCCAG..................................................741.000.00---------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
........................TGATGGAGGCCACAGTCATGGAGGAGAC.................................................................................................................................................................................................................................................................................................................281.000.00-------------------------------------------------------------------------------------------------------------------------------------------------1.00---------------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGTT.............................................................................................2111.003.00------------------------------------------------------1.00----------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGGATA...........................................................................................2311.0014.00-------------------------------1.00---------------------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................AGGCAGTAACCACCTGT..............................................................................................................................................................................171.000.00--------------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGCTA............................................................................................2211.003.00----------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGGTTT...........................................................................................2311.00126.00--------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATAGT.............................................................................................2211.001.00----------------------------1.00------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................TGGGGTACGATGGTGATGGGGA...........................................................................................2211.002.00------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGGTAGA..........................................................................................2511.00153.00-----------------------------------------------------------------------------------------------------------------------------------------------------------------1.00-----
....................................................................................................................................................................................................................................................TGGGGTACGATGGTGATGATGA...........................................................................................221.000.00--------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................TAACCATTCTGCCATTGTTCCCATT...................................................2521.000.501.00----------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGT..............................................................................................2111.006.00----------------------------------------------------1.00------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGGC.............................................................................................2111.0014.00------------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................CAACATATCTGTGGGGCAGAGGGGGGAGGTGCAAAGGACAAGTTGTGGCTCCATCTCCTTAAGGC...............................................................................................................................................................................................................6511.001.00---------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGGGA............................................................................................2311.0017.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGGGG............................................................................................2211.0014.00-------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------------
..................................................................................................................................................................................................................GTATCTCTGAACACTTGGCCCCATTGCTCTGGATTGGGGTACGATGGTGATGGTG............................................................................................5511.001.00---------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................TTCTGCCATTGTTCCCACAGAT................................................221.000.00--------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGGTTAA..........................................................................................2511.00153.00---------------------------------------------------------------------------------------------------------------------------1.00-------------------------------------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGGTGAA..........................................................................................2411.0024.00-------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGGTGTT..........................................................................................2511.007.00------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGCTGG..............................................................................................211.000.00----1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGCTGA..............................................................................................211.000.00---1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGAT................................................................................................1911.001.00----------------1.00------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................GGCAGAGGGGGGAGGTTCTA..............................................................................................................................................................................................................................................201.000.00--------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................GGGGTACGATGGTGATGGTGATC.........................................................................................2311.001.00-----------------------------------------------------------------------------------------------------------------------------------------1.00-----------------------------
.........................................................................................................................................................CTATATACAAGGAAGGCAGT........................................................................................................................................................................................2011.001.00------------------------1.00----------------------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................ATATACAAGGAAGGCAGTAACCA...................................................................................................................................................................................2311.001.00----------------------------------------------------------------------------------1.00------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................TGGGGTACGATGGTGATGGTTT...........................................................................................2211.0029.00----1.00------------------------------------------------------------------------------------------------------------------------------------------------------------------
...............................................................................................................................................TTAAGGCTCTCTATATACAAGG................................................................................................................................................................................................2211.001.00---------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................AAAGGACAAGTTGTGGCTCCATCTCCTTAAGGATC.............................................................................................................................................................................................................351.000.00-------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................TAACCATTCTGCCATTGTTCCCACAG..................................................2621.001.00-----------------------------------1.00-----------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGGTCA...........................................................................................2311.00126.00---1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................................GTCAAACCGCCCTGTCTGCCGAT.......................231.000.00-------------------------------------------------------------------------------------------------------------------------1.00---------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGGTGGT..........................................................................................2511.007.00--------------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGGA.............................................................................................2111.0014.00-----------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGGTTAT..........................................................................................2511.00153.00-------------------------------------------------------------------1.00---------------------------------------------------------------------------------------------------
...................................................................................................GGCAGAGGGGGGAGGATTC...............................................................................................................................................................................................................................................191.000.00-----------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................GGGGTACGATGGTGATGGT.............................................................................................1911.001.00---------------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------
........................................................................................................AGGGGGGAGGTGCAACTG...........................................................................................................................................................................................................................................181.000.00-----------------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................TAACCATTCTGCCATTGTTCCCACT...................................................251.000.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGGG.............................................................................................2211.0017.00--------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................TTCATGATGAAGGGCAACT..1911.001.00--------------------------------------------------------------------------------------------------1.00--------------------------------------------------------------------
.........................................................................................................................................................................................................................................................TACGATGGTGATGGTGA...........................................................................................1711.001.00------1.00----------------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGCT.............................................................................................2211.006.00-----------------------------------------------------------------------------------------------------------------------1.00-----------------------------------------------
...................................................................................................................................................................................................................TATCTCTGAACACTTGGCCCCATTGCTCTGGATTGGGGTACGATGGTGATGGTG............................................................................................5411.001.00---------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................TGGGGTACGATGGTGATGGTAA...........................................................................................2211.0029.00--------------1.00--------------------------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................GGTACGATGGTGATGGTGATC.........................................................................................2111.001.00-1.00---------------------------------------------------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................TGGGGTACGATGGTGATGGTGT...........................................................................................2211.0014.00-----------------------------------------------------------1.00-----------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................TGGGGTACGATGGTGATGGTTA...........................................................................................2211.0029.00------------------------------------------------------------------------------------------------------------1.00----------------------------------------------------------
..........................................TGGAGGAGGTGAGGACATGCCCGA...................................................................................................................................................................................................................................................................................................2411.001.00----------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................TTGGGGTACGATGGTGATGGTGATCTCTTAGGTGTTTGTAACCATTCTGCCATTGTTCCCACAG..................................................6411.001.00---------1.00-------------------------------------------------------------------------------------------------------------------------------------------------------------
...................................................................................................GGCAGAGGGGGGAGGTTCTT..............................................................................................................................................................................................................................................201.000.00--------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
................................................................................................TGGGGCAGAGGGGGGAGGTGC................................................................................................................................................................................................................................................2111.001.00-----------1.00-----------------------------------------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATCG..............................................................................................2111.001.00---------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................TAACCATTCTGCCATTGTTCCCA.....................................................2320.500.50----0.50------------------------------------------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................AAGGAAGGCAGTAACCACCTC...............................................................................................................................................................................2120.500.50----------------------0.50------------------------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................GTGATGGTGATCTCTTAGG..................................................................................1920.500.50----------------------0.50------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................CATTCTGCCATTGTTCCCACAGA.................................................2320.500.50-0.50---------------------------------------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................ATTCTGCCATTGTTCCCACAGA.................................................2220.500.50-0.50---------------------------------------------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................ACTGTGTATCTCTGAACACTT...................................................................................................................................2120.500.50------------------------0.50----------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................TAACCATTCTGCCATTGTTCCCACA...................................................2520.500.50-------0.50---------------------------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................CCATTCTGCCATTGTTCCCACAGA.................................................2420.500.50------------------------0.50----------------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................AACCATTCTGCCATTGTTCCCAC....................................................2320.500.50-0.50---------------------------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................TAACCATTCTGCCATTGTTCCC......................................................2220.500.50-----------------------------------------------------------------------0.50-----------------------------------------------------------------------------------------------
........................................................................................................AGGGGGGAGGTGCAAAGG...........................................................................................................................................................................................................................................1830.330.33-------------------------0.33---------------------------------------------------------------------------------------------------------------------------------------------

Antisense strand
TGGGGGAGGCGGCCACCGAGGGCATGATGGAGGCCACAGTCATGGAGGAGGTGAGGACATGCCCGAGGTCCCACATGCAGGACCTCAACATATCTGTGGGGCAGAGGGGGGAGGTGCAAAGGACAAGTTGTGGCTCCATCTCCTTAAGGCTCTCTATATACAAGGAAGGCAGTAACCACCTCCATCTTCACATCAACCCCCCAATACTGTGTATCTCTGAACACTTGGCCCCATTGCTCTGGATTGGGGTACGATGGTGATGGTGATCTCTTAGGTGTTTGTAACCATTCTGCCATTGTTCCCACAGACATGTCAAACCGCCCTGTCTGCCGACACTTCATGATGAAGGGCAACTGC
..............................................................................................................................................................................................................................................(((...(((((.((((((((((((((...................))))))..))))))))))))))))..................................................
.............................................................................................................................................................................................................................................238..................................................................307................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR306531(GSM750574)
19-24nt. (ago2 brain)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
GSM361408(GSM361408)
WholeCerebellum_P6_wt_rep1. (brain)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
mjTestesWT4()
Testes Data. (testes)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR059775(GSM562837)
MEF_Drosha. (MEF)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR037937(GSM510475)
293cand2. (cell line)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR065053(SRR065053)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR014229(GSM319953)
10 dpp MILI. (mili testes)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)
GSM314559(GSM314559)
ESC dgcr8 (454). (ESC)
SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)
SRR059765(GSM562827)
DN3_control. (thymus)
GSM361402(GSM361402)
CGNP_P6_p53--_Ink4c--_rep5. (brain)
SRR060845(GSM561991)
total RNA. (brain)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR059768(GSM562830)
Treg_control. (spleen)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
mjLiverWT3()
Liver Data. (liver)
GSM361430(GSM361430)
WholeCerebellum_1month_Ptc+-_Ink4c--_rep2. (brain)
SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR206939(GSM723280)
other. (brain)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
GSM361395(GSM361395)
CGNP_P6_wt_rep2. (brain)
SRR306538(GSM750581)
19-24nt. (ago2 brain)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR073955(GSM629281)
total RNA. (blood)
SRR306530(GSM750573)
19-24nt. (ago2 brain)
GSM361398(GSM361398)
CGNP_P6_p53--_Ink4c--_rep1. (brain)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)
SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjLiverKO1()
Liver Data. (Zcchc11 liver)
SRR306529(GSM750572)
19-24nt. (ago2 brain)
SRR037905(GSM510441)
brain_rep2. (brain)
SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)
SRR525242(SRA056111/SRX170318)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)
SRR553603(SRX182809)
source: Spermatids. (Spermatids)
SRR038741(GSM527276)
small RNA-Seq. (brain)
SRR037930(GSM510468)
e7p5_rep4. (embryo)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR553586(SRX182792)
source: Testis. (testes)
SRR014230(GSM319954)
10 dpp Dnmt3L-KO MILI. (mili testes)
SRR553584(SRX182790)
source: Heart. (Heart)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
SRR014237(GSM319961)
10 dpp MILI-KO total. (mili testes)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR206941(GSM723282)
other. (brain)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR037907(GSM510443)
brain_rep4. (brain)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
mjTestesWT1()
Testes Data. (testes)
SRR037910(GSM510447)
newborn_rep3. (total RNA)
SRR059771(GSM562833)
CD4_control. (spleen)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
GSM261959(GSM261959)
oocytesmallRNA-19to30. (oocyte)
GSM475279(GSM475279)
Miwi-IP. (miwi testes)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR042479(GSM539871)
mouse liver tissue [09-002]. (liver)
SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR306543(GSM750586)
19-24nt. (ago2 brain)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR038740(GSM527275)
small RNA-Seq. (dicer brain)
SRR206940(GSM723281)
other. (brain)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
GSM361415(GSM361415)
WholeCerebellum_P6_p53--_Ink4c--_rep4. (brain)
SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR037914(GSM510451)
newborn_rep7. (total RNA)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)
SRR037906(GSM510442)
brain_rep3. (brain)
GSM361407(GSM361407)
CGNP_P6_Ptc+-_Ink4c--_rep5. (brain)
SRR553585(SRX182791)
source: Kidney. (Kidney)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR059774(GSM562836)
MEF_control. (MEF)
SRR077866(GSM637803)
18-30 nt small RNAs. (liver)
mjTestesWT3()
Testes Data. (testes)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
....................................................................................................................................................................................................................................................TGGGGTACGATGGTGATGGTGA........................................................................................... 2214.004.00---------------------------------------1.00--------------------------------------------1.00--------------------------------------------------------------------1.00------1.00------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGGT............................................................................................. 2214.004.00---------------------------------------2.00--------------------------------------------1.00------------1.00---------------------------------------------------------------------
..........................................................................................................................................................................AGTAACCACCTCCATCAA......................................................................................................................................................................... 182.000.00----------------------1.001.00-----------------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................GGGGTACGATGGTGATGGTGACA......................................................................................... 2312.000.00-----------------------------------------------------------------------------1.00--------------1.00--------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................TGCCATTGTTCCCACACGG................................................ 192.000.00-----------------------------------------------2.00-----------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................GGGGTACGATGGTGATGGTGATCTC....................................................................................... 252.000.00-----------------------------------------------------------------------------1.00--------------1.00--------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................TGCCATTGTTCCCACAGA................................................. 1831.331.33---------------------------------------------------------------------------------------------------------1.33-------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................CAAACCGCCCTGTCTTACA......................... 191.000.00-------------------------------------------------------------------------------------------------------------------------------------1.00---------------------------------
................................................................................................................................................................................................................................................................................................................CAGACATGTCAAACCCAAT.................................. 191.000.00----------------------1.00------------------------------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................................................................................................................CAAACCGCCCTGTCTTAGA......................... 191.000.00--------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................................CCGCCCTGTCTGCCGAA....................... 171.000.00------------------------------------------------------------------------------------------------------------------------------1.00----------------------------------------
.....................................................................................................................................................................................................................................................GGGGTACGATGGTGATGGTGAC.......................................................................................... 2211.000.00-------------------------------------------------------------------------------------------------1.00---------------------------------------------------------------------
..........................................................................................................................................................................AGTAACCACCTCCATCAAC........................................................................................................................................................................ 191.000.00--------------------------------------------------------------------------------1.00--------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................ACGATGGTGATGGTGCGGC........................................................................................ 191.000.00---------------------------1.00-------------------------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................................................................................................CCATTCTGCCATTGTTCCCACAGACA............................................... 2621.001.00--------------------------------------------------------------------------------------------------------0.50--------------------------0.50-----------------------------------
................................................................................................................................................................................................................................................................................................................CAGACATGTCAAACCGA.................................... 171.000.00---------------------------------------------------1.00-------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................................ATTGGGGTACGATGGTGATGG.............................................................................................. 2111.001.00---------------------------------------1.00-------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................CCCCCAATACTGTGTCGA.............................................................................................................................................. 181.000.00--------------------------------------1.00--------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................ACCACCTCCATCTTCAGTC.................................................................................................................................................................... 191.000.00----------------------------------------------------------------------------------------------1.00------------------------------------------------------------------------
..................................................................................................................................................................................................................................................................................................TGCCATTGTTCCCACACGGC............................................... 201.000.00-------------------------------------------------1.00---------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................AACCATTCTGCCATTGTTCCCACAGACA............................................... 2820.500.50-----------------------------------------------------------------------------------------------------------------------------------0.50-----------------------------------
................................................................................................................................................................................................................................................................................................TCTGCCATTGTTCCCACAGACATGTCA.......................................... 2720.500.50---------------------------------------------------------------------------------------------------------------------------------------------------------------------0.50-
...........................................................................................................................................................................GTAACCACCTCCATCT.......................................................................................................................................................................... 1650.200.20----------------------------------------------------------------------------------------------------------------------------------------------------------------------0.20