ID: uc008cds.0
GENE: Skiv2l(1)
chr17:34976501-34976685-


(2)
AGO2.ip 		(1)
AGO3.ip 		(10)
B-CELL 		(10)
BRAIN 		(13)
CELL-LINE 		(14)
EMBRYO 		(9)
ESC 		(2)
FIBROBLAST 		(1)
KIDNEY 		(2)
LIVER 		(3)
LYMPH 		(12)
OTHER 		(1)
OTHER.ip 		(6)
OTHER.mut 		(5)
PIWI.ip 		(1)
PIWI.mut 		(2)
SKIN 		(5)
SPLEEN 		(1)
TDRD1.ip 		(28)
TESTES 		(4)
THYMUS 		(1)
TOTAL-RNA 		(1)
UTERUS

Sense strand
AGCTGAATTTTGGGCTGGTAGAGGTTGTGTATGAGTGGGCTAGGGGTATGGTAAGTGCCGGGTTTGGCAGTTGGCTGGTTGGGAGAAGCCATGCAAGACCTGGCACATTTAGTCTTCACTCTGCTCTTCCCATAGCCCTTCTCCGAGTTGGCAGGGCTCTCAGGGACCCCTGAGGGCTTGGTCGT
......................................................(((((((((((.(((..(((((..........)))))))).)))))))))))...............................................................................
..................................................51.............................................................114.....................................................................
SizePerfect hitTotal NormPerfect NormSRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		mjTestesWT4()
Testes Data. (testes)		SRR073954(GSM629280)
total RNA. (blood)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		mjTestesWT1()
Testes Data. (testes)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR037943(GSM510481)
293DcrTN. (cell line)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		GSM475279(GSM475279)
Miwi-IP. (miwi testes)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR553586(SRX182792)
source: Testis. (testes)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR037928(GSM510466)
e7p5_rep2. (embryo)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)		SRR037906(GSM510442)
brain_rep3. (brain)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		mjTestesWT2()
Testes Data. (testes)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR037902(GSM510438)
testes_rep3. (testes)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		GSM475281(GSM475281)
total RNA. (testes)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR037938(GSM510476)
293Red. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR073955(GSM629281)
total RNA. (blood)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR037901(GSM510437)
testes_rep2. (testes)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		RuiDcrWT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR037930(GSM510468)
e7p5_rep4. (embryo)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		GSM416732(GSM416732)
MEF. (cell line)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
...................................TGGGCTAGGGGTATGATTC...................................................................................................................................19618.333.50---0.170.33-2.50--0.17------0.17--0.50--------1.83---1.83--2.00--1.67--0.17-1.000.17----------------------------------------0.670.670.500.170.500.500.17-0.170.50-0.33---0.170.170.170.170.170.170.17-0.17-----0.17-0.17
........................................................................................CCATGCAAGACCTGGCACATTT...........................................................................22115.0015.00----1.00---1.00-----1.00-2.00------1.00------2.00--2.00-----1.00---------1.001.00------1.00-----------1.00-----------------------------------------------
....GAATTTTGGGCTGGTAGAGGTT...............................................................................................................................................................22114.0014.00-4.003.004.00-----1.00------1.00----1.00-----------------------------------------------------------------------------------------------
..........................................................................................ATGCAAGACCTGGCACATTTAGT........................................................................23113.0013.00-1.00--4.00--------------------------2.00----2.00-----1.00--1.00-----1.00--------------------------1.00--------------------------------------
..........................GTGTATGAGTGGGCTAGGGG...........................................................................................................................................2019.009.00-----9.00---------------------------------------------------------------------------------------------------------------
..................................................GTAAGTGCCGGGTTTGGCAGTTGGCTGGTTGGGAGAAGCCATGCAAGACCTGGCACATTTAGTCTTCACTCTGCTCTTCCCATAG..................................................8519.009.009.00--------------------------------------------------------------------------------------------------------------------
....GAATTTTGGGCTGGTAGAGGTTGT.............................................................................................................................................................2418.008.00-2.001.00----1.001.00-----------1.001.00------------------------------------------1.00----------------------------------------------------
..................................................GTAAGTGCCGGGTTTGGCAGTTGGCTGGTTGGGAGAAGCCATGCAAGACCTGGCACATTTAGTCTTCACTCTGCTCTTCCCATA...................................................8415.005.005.00--------------------------------------------------------------------------------------------------------------------
.........TTGGGCTGGTAGAGGTTGTGT...........................................................................................................................................................2115.005.00-1.002.002.00-----------------------------------------------------------------------------------------------------------------
..........TGGGCTGGTAGAGGTTGT.............................................................................................................................................................1815.005.00---1.001.00-----------------1.002.00---------------------------------------------------------------------------------------------
.........................................................................................CATGCAAGACCTGGCACATTT...........................................................................2114.004.00-------------------------3.00------------------------------------1.00------------------------------------------------------
........................................................................................CCATGCAAGACCTGGCACATT............................................................................2114.004.00--------------4.00------------------------------------------------------------------------------------------------------
...................................TGGGCTAGGGGTATG.......................................................................................................................................1563.503.50--------------------------1.830.17------------1.00-0.17-------------------------------------------------------0.17-----------0.17------
...................................TGGGCTAGGGGTATGATT....................................................................................................................................1863.503.50------0.50------------0.17--------0.33---0.17------0.50-0.17-0.17--------------------------------------------0.17------0.50-0.17--0.17--------0.17-0.17-0.17---
........TTTGGGCTGGTAGAGGTTGT.............................................................................................................................................................2013.003.00-1.00-1.00-----------------1.00-----------------------------------------------------------------------------------------------
...................AGAGGTTGTGTATGAGTGGGCT................................................................................................................................................2213.003.00--1.001.00---1.00-------------------------------------------------------------------------------------------------------------
..........TGGGCTGGTAGAGGTTGTGTATGAG......................................................................................................................................................2513.003.00---------------------------1.00---------1.00----------------------1.00--------------------------------------------------------
....GAATTTTGGGCTGGTAGAGGT................................................................................................................................................................2113.003.00-1.001.001.00-----------------------------------------------------------------------------------------------------------------
.............GCTGGTAGAGGTTGTGTATGAGTGG...................................................................................................................................................2513.003.00----------1.001.00------------------------------------------1.00--------------------------------------------------------------
...................................TGGGCTAGGGGTATGAT.....................................................................................................................................1762.503.50------1.83------------0.17-------------------------------------------------------------------------0.33------------------0.17----
...................................................TAAGTGCCGGGTTTGGCAGTTGG...............................................................................................................2312.002.00---------------1.00-------------------------------------------1.00---------------------------------------------------------
....GAATTTTGGGCTGGTAGAGGTTG..............................................................................................................................................................2312.002.00-------2.00-------------------------------------------------------------------------------------------------------------
........TTTGGGCTGGTAGAGGTTGTGT...........................................................................................................................................................2212.002.00--1.00--------------1.00---------------------------------------------------------------------------------------------------
...............TGGTAGAGGTTGTGTATGAGTGGGC.................................................................................................................................................2512.002.00-------------------------------------1.00--------------------------------1.00----------------------------------------------
.............................................................................................................................................TCCGAGTTGGCAGGGCTCTCAGGGA...................2512.002.00----------1.00------------------1.00---------------------------------------------------------------------------------------
.........................................................................................CATGCAAGACCTGGCACATTTAGT........................................................................2412.002.00------------------------1.00---------1.00----------------------------------------------------------------------------------
.........................................................................................CATGCAAGACCTGGCACATTTAG.........................................................................2312.002.00--------------------------------------------------------1.00----------1.00-------------------------------------------------
...................................................TAAGTGCCGGGTTTGGCAGTTGGC..............................................................................................................2412.002.00---------------2.00-----------------------------------------------------------------------------------------------------
........................................................................................CCATGCAAGACCTGGCACAT.............................................................................2012.002.00------------1.00-----------1.00--------------------------------------------------------------------------------------------
..........................................................................................ATGCAAGACCTGGCACATTTAGTCA......................................................................2512.001.00----2.00----------------------------------------------------------------------------------------------------------------
...........GGGCTGGTAGAGGTTGTGT...........................................................................................................................................................1912.002.00-1.00-----1.00-------------------------------------------------------------------------------------------------------------
...............TGGTAGAGGTTGTGTATGAGTGGGCT................................................................................................................................................2612.002.00----------1.001.00---------------------------------------------------------------------------------------------------------
........................................................................................CCATGCAAGACCTGGCACATTTAG.........................................................................2412.002.00----1.00---1.00------------------------------------------------------------------------------------------------------------
.........................................................................................CATGCAAGACCTGGCACATTTA..........................................................................2212.002.00------------1.00----------------------------------------------------------------1.00---------------------------------------
...TGAATTTTGGGCTGGTAGAGGTTGT.............................................................................................................................................................2512.002.00----------1.00------------------1.00---------------------------------------------------------------------------------------
...................................TGGGCTAGGGGTATGA......................................................................................................................................1661.833.50--------------------0.17-----0.83-------------0.50---------------------------------------------------------0.17----------------0.17-
.................................AGTGGGCTAGGGGTATG.......................................................................................................................................1741.501.50------0.25--------0.25-----------0.25------------------------------------------------------------0.25---0.50------------------------
...........................................................................................................................................TCTCCGAGTTGGCAGGGCTCTCAG......................2411.001.00------------------1.00--------------------------------------------------------------------------------------------------
.....................AGGTTGTGTATGAGTGGGCTA...............................................................................................................................................2111.001.00--------------------------------------------------------------------------------1.00------------------------------------
..........................................................................................................................................TTCTCCGAGTTGGCAGGGCTCTCAGGGA...................2811.001.00--------------------1.00------------------------------------------------------------------------------------------------
.......TTTTGGGCTGGTAGAGGTT...............................................................................................................................................................1911.001.00-----------------1.00---------------------------------------------------------------------------------------------------
.GCTGAATTTTGGGCTGGTAGAGGTT...............................................................................................................................................................2511.001.00------------------------------------------------------------------------1.00--------------------------------------------
........................................................................................CCATGCAAGACCTGGCACATTAT..........................................................................2311.004.00--------1.00------------------------------------------------------------------------------------------------------------
..................TAGAGGTTGTGTATGAGTGGGCTA...............................................................................................................................................2411.001.00-----------------1.00---------------------------------------------------------------------------------------------------
..............................ATGAGTGGGCTAGGGGTATGCT.....................................................................................................................................221.000.00----------------------------------1.00----------------------------------------------------------------------------------
.........................................................................................CATGCAAGACCTGGCACATTAA..........................................................................221.000.00--------------------------------------------------------------------------1.00------------------------------------------
.....................................................................GTTGGCTGGTTGGGAGGGG.................................................................................................191.000.00------------1.00--------------------------------------------------------------------------------------------------------
.........................................................................................................................................................GGGCTCTCAGGGACCCCTGAGGGCTTG.....2711.001.00---------------------------1.00-----------------------------------------------------------------------------------------
........................................................................................CCATGCAAGACCTGGCACATAT...........................................................................2211.002.00---------------------------------------------------------------------------------1.00-----------------------------------
.GCTGAATTTTGGGCTGGTAGAGGTTG..............................................................................................................................................................2611.001.00--------------------1.00------------------------------------------------------------------------------------------------
.....................AGGTTGTGTATGAGTGGGCTAGGGG...........................................................................................................................................2511.001.00----------------------------------------------------------------------------1.00----------------------------------------
..................................................GTAAGTGCCGGGTTTGGCAGTTGGCT.............................................................................................................2611.001.00-------------------1.00-------------------------------------------------------------------------------------------------
......ATTTTGGGCTGGTAGAGGTTGTGTATG........................................................................................................................................................2711.001.00-----------1.00---------------------------------------------------------------------------------------------------------
......................GGTTGTGTATGAGTGGGCTAGGGGTA.........................................................................................................................................2611.001.00-----------1.00---------------------------------------------------------------------------------------------------------
............................GTATGAGTGGGCTAGGGGT..........................................................................................................................................1911.001.00----------------1.00----------------------------------------------------------------------------------------------------
........TTTGGGCTGGTAGAGGTTG..............................................................................................................................................................1911.001.00--1.00------------------------------------------------------------------------------------------------------------------
..........TGGGCTGGTAGAGGTTGTGTATGAGT.....................................................................................................................................................2611.001.00-----------------------------------------------1.00---------------------------------------------------------------------
..CTGAATTTTGGGCTGGTAGAGGTT...............................................................................................................................................................2411.001.00-----------------------------------------------------1.00---------------------------------------------------------------
......ATTTTGGGCTGGTAGAGGTTGTGTAT.........................................................................................................................................................2611.001.00--------------------------------------------------------------------1.00------------------------------------------------
.................................................................................................................................................AGTTGGCAGGGCTCTCAT......................181.000.00-------------------1.00-------------------------------------------------------------------------------------------------
..........TGGGCTGGTAGAGGTTGTG............................................................................................................................................................1911.001.00-------------------------------------------------------------------------1.00-------------------------------------------
..........TGGGCTGGTAGAGGTT...............................................................................................................................................................1611.001.00-1.00-------------------------------------------------------------------------------------------------------------------
........................................................................................CCATGCAAGACCTGGCACATATA..........................................................................2311.002.00--------1.00------------------------------------------------------------------------------------------------------------
........TTTGGGCTGGTAGAGGTT...............................................................................................................................................................1811.001.00---------1.00-----------------------------------------------------------------------------------------------------------
........................................................................................CCATGCAAGACCTGGCACATTTA..........................................................................2311.001.00--------1.00------------------------------------------------------------------------------------------------------------
..........................................................................................ATGCAAGACCTGGCACATTTATT........................................................................231.000.00-----------------------------------------------------------------------------------1.00---------------------------------
.........................................................................................CATGCAAGACCTGGCACATTTAT.........................................................................2311.002.00-----------------------------------------1.00---------------------------------------------------------------------------
..........................................................CGGGTTTGGCAGTT.................................................................................................................1411.001.00------------------------------------------------------------------------------------1.00--------------------------------
..........................................................................................ATGCAAGACCTGGCACATTTAGA........................................................................231.000.00---------------------------------------------------------------1.00-----------------------------------------------------
.........TTGGGCTGGTAGAGGTTGTGTATG........................................................................................................................................................2411.001.00------------------1.00--------------------------------------------------------------------------------------------------
...................................................TAAGTGCCGGGTTTGGCAGTTGGCTA............................................................................................................261.000.00---------------1.00-----------------------------------------------------------------------------------------------------
.........TTGGGCTGGTAGAGGTTGTGTAT.........................................................................................................................................................2311.001.00-1.00-------------------------------------------------------------------------------------------------------------------
........................................................................................CCATGCAAGACCTGGCACATTG...........................................................................2211.004.00------------------------1.00--------------------------------------------------------------------------------------------
....................................................................................................................................................TGGCAGGGCTCTCAGGGACCCCTGA............2511.001.00-------1.00-------------------------------------------------------------------------------------------------------------
...TGAATTTTGGGCTGGTAGAGGTTGTGTATG........................................................................................................................................................3011.001.00------------------------------------------------------------------1.00--------------------------------------------------
..................................................GTAAGTGCCGGGTTTGGCA....................................................................................................................1911.001.00----------------------------------------------------------1.00----------------------------------------------------------
...................................TGGGCTAGGGGTATGGTTC...................................................................................................................................191.000.00--------------------------------------------1.00------------------------------------------------------------------------
...........................................................................................................................................TCTCCGAGTTGGCAGGGCTCTCAGG.....................2511.001.00----------------------1.00----------------------------------------------------------------------------------------------
...TGAATTTTGGGCTGGTAGAGGTTGTG............................................................................................................................................................2611.001.00---------------------------------------------------------------------------1.00-----------------------------------------
..............................ATGAGTGGGCTAGGGGTAT........................................................................................................................................1911.001.00---------1.00-----------------------------------------------------------------------------------------------------------
...........................................................................................................................................TCTCCGAGTTGGCAGGGCTCTCAGGGA...................2711.001.00----------------------1.00----------------------------------------------------------------------------------------------
...........................................................................TGGTTGGGAGAAGCCATGCAAG........................................................................................2211.001.00--1.00------------------------------------------------------------------------------------------------------------------
...................................................TAAGTGCCGGGTTTGGCAGTTTGCT.............................................................................................................251.000.00------------------1.00--------------------------------------------------------------------------------------------------
...................................................................CAGTTGGCTGGTTGGGAGAAGCCATGCAAGACC.....................................................................................3311.001.00-------------------------------------------------------1.00-------------------------------------------------------------
.....AATTTTGGGCTGGTAGA...................................................................................................................................................................1711.001.00--1.00------------------------------------------------------------------------------------------------------------------
......................................................................................................GCACATTTAGTCTTCACTCTGCTCTTC........................................................2711.001.00----------------------------------------------------------------------------------1.00----------------------------------
..................................................GTAAGTGCCGGGTTTGGCAGTTGG...............................................................................................................2411.001.00----------------------------------------------1.00----------------------------------------------------------------------
....................................................AAGTGCCGGGTTTGGCAGTTGGC..............................................................................................................2311.001.00-----------------------------------------------------------------1.00---------------------------------------------------
..........TGGGCTGGTAGAGGTTGTGTATGAGTGGGC.................................................................................................................................................3011.001.00-------------------------------------------------------------1.00-------------------------------------------------------
......ATTTTGGGCTGGTAGAGGTTGTGT...........................................................................................................................................................2411.001.00---1.00-----------------------------------------------------------------------------------------------------------------
..............................ATGAGTGGGCTAGGGGTATGC......................................................................................................................................211.000.00-----------------1.00---------------------------------------------------------------------------------------------------
..................TAGAGGTTGTGTATGAGTGGGCTAG..............................................................................................................................................2511.001.00----------1.00----------------------------------------------------------------------------------------------------------
.........TTGGGCTGGTAGAGGTTGT.............................................................................................................................................................1911.001.00---------1.00-----------------------------------------------------------------------------------------------------------
...................................TGGGCTAGGGGTATGGTT....................................................................................................................................181.000.00-------------------------------------------------------------------------------1.00-------------------------------------
...............TGGTAGAGGTTGTGTATGA.......................................................................................................................................................1911.001.00------------------1.00--------------------------------------------------------------------------------------------------
..............................ATGAGTGGGCTAGGGGT..........................................................................................................................................1721.001.00-0.50-0.50-----------------------------------------------------------------------------------------------------------------
..........................................................................................ATGCAAGACCTGGCACATTTAGTC.......................................................................2411.001.00---------1.00-----------------------------------------------------------------------------------------------------------
...........GGGCTGGTAGAGGTTG..............................................................................................................................................................1620.500.50-0.50-------------------------------------------------------------------------------------------------------------------
...........GGGCTGGTAGAGGTTGT.............................................................................................................................................................1720.500.50---------0.50-----------------------------------------------------------------------------------------------------------
...................................TGGGCTAGGGGTATGTTTC...................................................................................................................................1960.333.50---------------------------------------------------------------------------------------0.17-------------------0.17---------
...................................TGGGCTAGGGGTATGAA.....................................................................................................................................1760.333.50------0.33--------------------------------------------------------------------------------------------------------------
...................................TGGGCTAGGGGTATGAATC...................................................................................................................................1960.333.50------0.17---------------------0.17----------------------------------------------------------------------------------------
......................................................................................................................................................GCAGGGCTCTCAGGGACC.................1830.330.33---------------------------------------------------------------------------------------------------0.33-----------------
...................................TGGGCTAGGGGTATGATTG...................................................................................................................................1960.333.50-------------------------------------------------------------------------------------------------0.17---0.17---------------
...................................TGGGCTAGGGGTATGTT.....................................................................................................................................1760.173.50-------------------------------------------------------------------------------------------0.17-------------------------
...................................TGGGCTAGGGGTATGAGTC...................................................................................................................................1960.173.50-------------------------------------------------------------------------------------------0.17-------------------------
...................................TGGGCTAGGGGTATGATG....................................................................................................................................1860.173.50------------------------------------------------------------------------------------------------0.17--------------------

Antisense strand
AGCTGAATTTTGGGCTGGTAGAGGTTGTGTATGAGTGGGCTAGGGGTATGGTAAGTGCCGGGTTTGGCAGTTGGCTGGTTGGGAGAAGCCATGCAAGACCTGGCACATTTAGTCTTCACTCTGCTCTTCCCATAGCCCTTCTCCGAGTTGGCAGGGCTCTCAGGGACCCCTGAGGGCTTGGTCGT
......................................................(((((((((((.(((..(((((..........)))))))).)))))))))))...............................................................................
..................................................51.............................................................114.....................................................................
SizePerfect hitTotal NormPerfect NormSRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		mjTestesWT4()
Testes Data. (testes)		SRR073954(GSM629280)
total RNA. (blood)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		mjTestesWT1()
Testes Data. (testes)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR037943(GSM510481)
293DcrTN. (cell line)		GSM475280(GSM475280)
Mili-IP. (mili testes)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		GSM475279(GSM475279)
Miwi-IP. (miwi testes)		SRR037944(GSM510482)
293DcrTN_cand5. (cell line)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR037941(GSM510479)
293DroshaTN. (cell line)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR553586(SRX182792)
source: Testis. (testes)		SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)		SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)		SRR037928(GSM510466)
e7p5_rep2. (embryo)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)		mjTestesKO6()
Testes Data. (Zcchc11 testes)		SRR059770(GSM562832)
Treg_Dicer. (spleen)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR042461(GSM539853)
mouse dendritic cells [09-002]. (bone marrow)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)		SRR037906(GSM510442)
brain_rep3. (brain)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)		mjTestesWT2()
Testes Data. (testes)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR051939(GSM545783)
Mov10L1-associated piRNAs. (mov10L testes)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)		SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR037902(GSM510438)
testes_rep3. (testes)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		GSM475281(GSM475281)
total RNA. (testes)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		SRR059767(GSM562829)
DN3_Dicer. (thymus)		SRR037938(GSM510476)
293Red. (cell line)		SRR037937(GSM510475)
293cand2. (cell line)		SRR073955(GSM629281)
total RNA. (blood)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR037940(GSM510478)
293cand5_rep2. (cell line)		GSM314552(GSM314552)
ESC wild type (Illumina). (ESC)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR037929(GSM510467)
e7p5_rep3. (embryo)		SRR059766(GSM562828)
DN3_Drosha. (thymus)		SRR037901(GSM510437)
testes_rep2. (testes)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		RuiDcrWT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)		SRR037932(GSM510470)
293cand4_rep1. (cell line)		SRR037930(GSM510468)
e7p5_rep4. (embryo)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		GSM416732(GSM416732)
MEF. (cell line)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
............................................................................................................................TCTTCCCATAGCCCTTTC........................................... 181.000.00------------------------------------------------1.00--------------------------------------------------------------------
................................................................................................................................CCCATAGCCCTTCTCCGAGTTGGCA................................ 2511.001.00-----------1.00---------------------------------------------------------------------------------------------------------
..................................................................................................................................................................GGGACCCCTGAGGGCTAA..... 181.000.00------1.00--------------------------------------------------------------------------------------------------------------
............................................................................................................................TCTTCCCATAGCCCTTTTT.......................................... 191.000.00------------1.00--------------------------------------------------------------------------------------------------------
.GCTGAATTTTGGGCTGGTA..................................................................................................................................................................... 191.000.00-----------------------------------------------------------------------1.00---------------------------------------------
............................................................................................................................TCTTCCCATAGCCCTTTT........................................... 181.000.00------------1.00--------------------------------------------------------------------------------------------------------
............................................................................................................................................................CTCTCAGGGACCCCTGAGGGCTT...... 2311.001.00-------------------1.00-------------------------------------------------------------------------------------------------