ID: uc007ypu.14
GENE: Eif2b5(15)
chr16:20508843-20509083+


(1)
AGO1.ip
(7)
AGO2.ip
(12)
B-CELL
(23)
BRAIN
(1)
CELL-LINE
(1)
DCR.mut
(2)
DGCR8.mut
(9)
EMBRYO
(10)
ESC
(3)
FIBROBLAST
(1)
KIDNEY
(5)
LYMPH
(21)
OTHER
(4)
OTHER.mut
(4)
PIWI.ip
(2)
PIWI.mut
(8)
SPLEEN
(22)
TESTES
(1)
THYMUS
(4)
TOTAL-RNA
(1)
UTERUS

Sense strand
GCCAAAGAGACACAACTGACGAAGGCCAGCAGTTACGGAAGAATCAACAGGTACGCTGCCCTCTGCTCCCTGGATCCCGAGTCCTCCACTGGAAACTCTAGGACTCTGTGGCCAGAACTGTTTATCTGCTAACAGGAACAGTGGGAATGCGTGGTTCTCTCCTAGCAGCTGTCCCCTCTGCTTCCTTGCAGCTGCAGAGGTTCATCCAGTGGCTGAGAGAGGCAGAAGAAGAGTCATCCGA
.............................................................................................................................((((....((((((((.((((.(((..((......))..)))....))))..))).))))).))))..................................................
.............................................................................................................................126..............................................................191................................................
SizePerfect hitTotal NormPerfect NormSRR402760(SRX117943)
source: ES E14 male cells. (ESC)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR306531(GSM750574)
19-24nt. (ago2 brain)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR206941(GSM723282)
other. (brain)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
GSM510450(GSM510450)
newborn_rep6. (total RNA)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)
SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
SRR073954(GSM629280)
total RNA. (blood)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
mjTestesWT2()
Testes Data. (testes)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR525240(SRA056111/SRX170316)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR037905(GSM510441)
brain_rep2. (brain)
SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
GSM510455(GSM510455)
newborn_rep11. (total RNA)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
GSM510454(GSM510454)
newborn_rep10. (total RNA)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR553603(SRX182809)
source: Spermatids. (Spermatids)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)
SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR059772(GSM562834)
CD4_Drosha. (spleen)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR206940(GSM723281)
other. (brain)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
..................................................................................................................................AACAGGAACAGTGGGAATGCGT.........................................................................................22137.0037.00-6.002.001.002.00-1.001.00----3.00------2.00-2.001.00----1.00----3.003.00-1.00-----1.00---------------1.00------------1.00---------1.00----------1.00----1.00--1.00-----------------1.00---
...................................................................................................................................ACAGGAACAGTGGGAATGCGT.........................................................................................21118.0018.00--1.001.00--1.00------4.00--4.00-1.00------------------1.00----------1.00---------1.00-------1.00----------------------------------------1.00--1.00----------
..................................................................................................................................AACAGGAACAGTGGGAATGCGTG........................................................................................23117.0017.00--1.00-1.00-----1.00------1.00-2.00-------1.00-1.00-1.00-------1.00--1.00----1.00---------1.00-----------1.00---------------------------------------1.00--1.00--1.00-----
..................................................................................................................................AACAGGAACAGTGGGAATGCGTGT.......................................................................................24111.0017.00--1.00-1.001.00------------2.00-----------1.00-------------1.00--------------------------1.00-------1.00-----------------------1.00----------1.00------
.........................................................................................................................................................................TGTCCCCTCTGCTTCCTTGCAGT.................................................23111.001.00---1.00----------1.00-------------------1.00----------------1.00-2.00------1.00------1.00-----1.00-----------------------1.00---1.00-------------------
.................................................................................................................................TAACAGGAACAGTGGGAATGC...........................................................................................21110.0010.00-2.00----------1.00-1.00---------2.00------------------------------2.00---1.001.00------------------------------------------------------------
...................................................................................................................................ACAGGAACAGTGGGAATGCGTGT.......................................................................................2318.007.00---------------------------1.00--1.00-------------1.00-----1.00-------1.00---1.00------------------1.00--------------------------1.00------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTGG.......................................................................................2218.008.00---2.00---1.00------------------------------1.00----1.00-1.00------2.00--------------------------------------------------------------------
...................................................................................................................................ACAGGAACAGTGGGAATGCGTG........................................................................................2217.007.00-----------------1.00------------1.00-------------------------1.00-------------------------1.00------1.00----------1.00------------1.00-------
....................................................................................................................................CAGGAACAGTGGGAATGCGT.........................................................................................2017.007.00---------------------2.00---3.00-----------1.001.00----------------------------------------------------------------------------------
.................................TACGGAAGAATCAACAG...............................................................................................................................................................................................1726.506.50-4.00--------0.50-----------0.50-----------0.50--------------------------0.50---------------------------------------------------------0.50-
................................TTACGGAAGAATCAACAG...............................................................................................................................................................................................1816.006.00---------5.00----------------1.00----------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................CATCCAGTGGCTGAGAGAGGCAGAAG.............2615.005.005.00------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTGGT......................................................................................2314.004.00------1.00---------------1.00-------------1.00-----------------1.00------------------------------------------------------------------
...................................................................................................................................ACAGGAACAGTGGGAATGCGTGA.......................................................................................2314.007.00--1.00--------------1.00--------------------------------------------------------------------------1.00------------------1.00---------
..................................................................................................................................AACAGGAACAGTGGGAATGCGTGA.......................................................................................2414.0017.00--1.00-2.00------------------------------------------1.00-------------------------------------------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTG........................................................................................2113.003.00--1.00-----------------------------------------------------------------------------------1.00---1.00------------------------------
............................................................................................................................................................................................................TCCAGTGGCTGAGAGAGGCAGAAGAAG..........2713.003.00--------1.00-1.00---------------1.00----------------------------------------------------------------------------------------------
..................................................................................................................................AACAGGAACAGTGGGAATGCG..........................................................................................2113.003.00-------1.00---------------------1.00------------------------------------------------------------------------1.00------------------
..................................................................................................................................AACAGGAACAGTGGGAATGC...........................................................................................2013.003.00------1.00-----------------1.00--------------1.00---------------------------------------------------------------------------------
................................................................................................TCTAGGACTCTGTGGCCAGAACTGTTTATCTGCTAACAGGAACAGTGGGAATGCGTGGTTCTCTCCTAGCAGCTGTCCCCTCTGCTTCCTTGCAG..................................................9512.002.00----------------------------------------2.00--------------------------------------------------------------------------------
............................................................................................................................................................................................................TCCAGTGGCTGAGAGAGGCAGAAGAA...........2612.002.00-----------------------------------------------------------------1.00---------------------------1.00---------------------------
.....................................................................................................................................AGGAACAGTGGGAATGCGTGGT......................................................................................2212.002.00---1.00-1.00-------------------------------------------------------------------------------------------------------------------
............................................................................................................................................................................................................TCCAGTGGCTGAGAGAGGCAGAAGA............2512.002.00-----------1.00--------------------------------------------------------------1.00----------------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTGGTT.....................................................................................2412.002.00--1.00---------------------------------------------------------------------1.00------------------------------------------------
.......................................................................................................................................................................................................GTTCATCCAGTGGCTGAGA.......................1912.002.00----------------------------2.00--------------------------------------------------------------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTGA.......................................................................................2212.003.00-----1.00-----------------------------------------------------------------------------------------1.00-------------------------
.........................................................................................................................................................................................................TCATCCAGTGGCTGAGAGAGGCAGAAGA............2812.002.002.00------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTGT.......................................................................................2212.003.00------1.00-------------------------------------------------------------------------------------------------1.00----------------
..............................AGTTACGGAAGAATCAACAG...............................................................................................................................................................................................2011.001.00----------------------------------------------1.00--------------------------------------------------------------------------
.......................................................................................................................................................................................................GTTCATCCAGTGGCTGAGAGAGGCAGA...............2711.001.00----------------------------------------------------------------------------------------------1.00--------------------------
..................................................................................................................................AACAGGAACAGTGGGAAT.............................................................................................1811.001.00------------------------------------------1.00------------------------------------------------------------------------------
.................................................................................................................................TAACAGGAACAGTGGGAATGTA..........................................................................................221.000.00------------------------------------------------------------------------------1.00------------------------------------------
.......................................AGAATCAACAGGTACGCTGCCCTC..................................................................................................................................................................................2411.001.00-----------------------------1.00-------------------------------------------------------------------------------------------
.............................................................................................AACTCTAGGACTCTGCATT.................................................................................................................................191.000.00--------------1.00----------------------------------------------------------------------------------------------------------
.........ACACAACTGACGAAGGCCAGCAGTTAC.............................................................................................................................................................................................................2711.001.00-------1.00-----------------------------------------------------------------------------------------------------------------
.........................................................................................................................................ACAGTGGGAATGCGTGGA......................................................................................181.000.00--------------------------------------------------------------------------------------------------------------------1.00----
............................................................................................................................................................................................................TCCAGTGGCTGAGAGAGGCAGAAGAAGA.........2811.001.00-----------------------1.00-------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................TTCATCCAGTGGCTGAGAGAGGCAGAA..............2711.001.00--------------------1.00----------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................GTGGCTGAGAGAGGCAGAAGT............211.000.00---------------1.00---------------------------------------------------------------------------------------------------------
...................................................................................................................................................................AGCAGCTGTCCCCTCTGCTTCCTTGCAG..................................................2811.001.00---------------------------------------------1.00---------------------------------------------------------------------------
................TGACGAAGGCCAGCAGTTACGGAAGG.......................................................................................................................................................................................................261.000.00--------------------1.00----------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................AGTGGCTGAGAGAGGCAGAAGAAGA.........2511.001.00-----------------------1.00-------------------------------------------------------------------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTGAAA.....................................................................................2411.003.00-----1.00-------------------------------------------------------------------------------------------------------------------
..CAAAGAGACACAACTGACGAAGGCCAGC...................................................................................................................................................................................................................2811.001.00--------1.00----------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................ATCCAGTGGCTGAGAGAGGC..................2011.001.00--------------1.00----------------------------------------------------------------------------------------------------------
..................................................................................................................................AACAGGAACAGTGGGAATGCGTGTA......................................................................................2511.0017.00----1.00--------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................ATCCAGTGGCTGAGAGAGGCAGAAGAAGAG........3011.001.00------------------------------------------------------1.00------------------------------------------------------------------
.....................................................................................................................................AGGAACAGTGGGAATGCGTGGTATA...................................................................................2511.002.00--1.00----------------------------------------------------------------------------------------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTGGTAA....................................................................................2511.004.00---------------------------------------------------1.00---------------------------------------------------------------------
...............................GTTACGGAAGAATCAACA................................................................................................................................................................................................1811.001.00-------------------------------------------1.00-----------------------------------------------------------------------------
........................GCCAGCAGTTACGGAAGAATCAA..................................................................................................................................................................................................2311.001.00---------------1.00---------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................TGTCCCCTCTGCTTCCTTGCATA.................................................231.000.00---------------------------------------------------------------------------------------------------------1.00---------------
...........................................................................................................................................................................................................ATCCAGTGGCTGAGAGAGGCAGAAGAAGA.........2911.001.00----------------------------------------------------------------------------------------------------------1.00--------------
.........................................................................................................................................................................................................TCATCCAGTGGCTGAGAGATGC..................221.000.00-----------------------------------------1.00-------------------------------------------------------------------------------
................TGACGAAGGCCAGCAGTTACGGAAGAA......................................................................................................................................................................................................2711.001.00-----------1.00-------------------------------------------------------------------------------------------------------------
....................GAAGGCCAGCAGTTACGGAAGAATTT...................................................................................................................................................................................................261.000.00---------------------------------------------------------------------------------------1.00---------------------------------
...............................................................................................................................................................................................................AGTGGCTGAGAGAGGCAGAAGAAG..........2411.001.00--------------------------1.00----------------------------------------------------------------------------------------------
..................................................GTACGCTGCCCTCTGCTCCCTGGAT......................................................................................................................................................................2511.001.00-----------1.00-------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................GTGGCTGAGAGAGGCAGAAGAA...........2211.001.00-------------------------------1.00-----------------------------------------------------------------------------------------
.............................................................................................................................................................................................................CCAGTGGCTGAGAGAGTT..................181.000.00----------------------------1.00--------------------------------------------------------------------------------------------
................................................................................................................................................................................................TGCAGAGGTTCATCCAGTGGCTGAGAG......................2711.001.00--------1.00----------------------------------------------------------------------------------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTAA.......................................................................................2211.007.00-----------------------------------------------------------------------------1.00-------------------------------------------
........................................................................................CTGGAAACTCTAGGACTCTGTGGCCAGAAC...........................................................................................................................3011.001.00------------------------------------------------------------------------------------1.00------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTGGAA.....................................................................................2411.008.00-----------------1.00-------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................CATCCAGTGGCTGAGAGAGGCAGAA..............2511.001.00------------------------------------------------1.00------------------------------------------------------------------------
...........................................................................................................................................................................................................ATCCAGTGGCTGAGAGAGGCAGAAGAA...........2711.001.00---------------1.00---------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................TCATCCAGTGGCTGAGAGAGGCAGAAA.............271.000.00---------------1.00---------------------------------------------------------------------------------------------------------
.....................................................................................................................................AGGAACAGTGGGAATGCGTG........................................................................................2011.001.00-----1.00-------------------------------------------------------------------------------------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTGGTAT....................................................................................2511.004.00---1.00---------------------------------------------------------------------------------------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTGTAT.....................................................................................2411.003.00--1.00----------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................CAGTGGCTGAGAGAGGCAGAAGAAG..........2511.001.00----------------------------------------------------------------------------1.00--------------------------------------------
..................................................................................................................................AACAGGAACAGTGGGAATGCGCGT.......................................................................................2411.003.00------------------1.00------------------------------------------------------------------------------------------------------
......................................................................................................................................................GTGGTTCTCTCCTAGCAGCT.......................................................................2011.001.00----------------------------------1.00--------------------------------------------------------------------------------------
................TGACGAAGGCCAGCAGTTACGGAAGAAT.....................................................................................................................................................................................................2811.001.00--------------------1.00----------------------------------------------------------------------------------------------------
...................................................................................................................................ACAGGAACAGTGGGAATGC...........................................................................................1911.001.00---1.00---------------------------------------------------------------------------------------------------------------------
...AAAGAGACACAACTGACGAAGGCCAGCA..................................................................................................................................................................................................................2811.001.00----------1.00--------------------------------------------------------------------------------------------------------------
.CCAAAGAGACACAACTGACGAAGGCCA.....................................................................................................................................................................................................................2711.001.00--------1.00----------------------------------------------------------------------------------------------------------------
....AAGAGACACAACTGACGAAGGCCAGCA..................................................................................................................................................................................................................2711.001.00-------------------------------------------------1.00-----------------------------------------------------------------------
................TGACGAAGGCCAGCAGTTACGGAAGAATCA...................................................................................................................................................................................................3011.001.00------------------------------------1.00------------------------------------------------------------------------------------
..................................................................................................................................AACAGGAACAGTGGGAATGCGTGTAA.....................................................................................2611.0017.00-----1.00-------------------------------------------------------------------------------------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCGTGGTTTT...................................................................................2611.002.00---1.00---------------------------------------------------------------------------------------------------------------------
...............................................................................................................................GCTAACAGGAACAGTGGGAATGCGTG........................................................................................2611.001.00-------1.00-----------------------------------------------------------------------------------------------------------------
...............................GTTACGGAAGAATCAACAG...............................................................................................................................................................................................1911.001.00----------------------1.00--------------------------------------------------------------------------------------------------
....................................................................................................................................CAGGAACAGTGGGAATGCG..........................................................................................1911.001.00----1.00--------------------------------------------------------------------------------------------------------------------
..........................CAGCAGTTACGGAAGAA......................................................................................................................................................................................................1711.001.00----------------------------------------------1.00--------------------------------------------------------------------------
......................AGGCCAGCAGTTACGGAAGAATCAACAG...............................................................................................................................................................................................2811.001.00-------------------------------------------------1.00-----------------------------------------------------------------------
...................................................................................................................................ACAGGAACAGTGGGAATGCGTGC.......................................................................................2311.007.00---1.00---------------------------------------------------------------------------------------------------------------------
...................CGAAGGCCAGCAGTTACGGAAGAATC....................................................................................................................................................................................................2611.001.00---------------------------------------------------------------------------1.00---------------------------------------------
............................................................................................................................................................................................................TCCAGTGGCTGAGAGAGGCAGAAGAAGAG........2911.001.00----------1.00--------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................TGTCCCCTCTGCTTCCTTGCAG..................................................2211.001.00--------------------------------------------------------1.00----------------------------------------------------------------
..................ACGAAGGCCAGCAGTTACG............................................................................................................................................................................................................1911.001.00---------------------------------------------------------------1.00---------------------------------------------------------
................................................................................................................................................GAATGCGTGGTTCTCTCCTAGC...........................................................................2211.001.00-------------------------------------------------------------1.00-----------------------------------------------------------
.....................................................................................................................................AGGAACAGTGGGAATGCGTGGTG.....................................................................................2311.002.00--------------------------------------------------1.00----------------------------------------------------------------------
............................................................................................................................................................................................................TCCAGTGGCTGAGAGAGGCAGAAG.............2411.001.00-----------1.00-------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................TGGCTGAGAGAGGCAGAAGAAGAGTCATC...2911.001.00--------------------1.00----------------------------------------------------------------------------------------------------
.................................................................................................................................TAACAGGAACAGTGGGAAT.............................................................................................1911.001.00-----------------------------------------------------------------------------------1.00-------------------------------------
.......................................................................................................................................................................GCTGTCCCCTCTGCTTCCTTG.....................................................2111.001.00----------------------------------------------------------------------------------------1.00--------------------------------
.............AACTGACGAAGGCCAGCAGTTACGGAA.........................................................................................................................................................................................................2711.001.00-----------------------------------1.00-------------------------------------------------------------------------------------
.................................................................................................................................TAACAGGAACAGTGGGAATGCAT.........................................................................................2311.0010.00--------------------------------------------------------------------------------------------------1.00----------------------
.............................................................TCTGCTCCCTGGATCCCGAGTCCTC...........................................................................................................................................................2511.001.00--------------------------------------------------------------------1.00----------------------------------------------------
.........................................................................................................................................ACAGTGGGAATGCGTG........................................................................................1620.500.50--------------------------------------------------------------0.50----------------------------------------------------------
..............................................................................................................................................................................................................CAGTGGCTGAGAGAGGC..................1720.500.50----------------------------------------------------------------------------------------------------------------------0.50--
..................................ACGGAAGAATCAACAG...............................................................................................................................................................................................1650.200.20----------0.20--------------------------------------------------------------------------------------------------------------
..................................ACGGAAGAATCAACAGCTGA...........................................................................................................................................................................................2050.200.20------------------------------------------------------------------------------------------------------------------------0.20

Antisense strand
GCCAAAGAGACACAACTGACGAAGGCCAGCAGTTACGGAAGAATCAACAGGTACGCTGCCCTCTGCTCCCTGGATCCCGAGTCCTCCACTGGAAACTCTAGGACTCTGTGGCCAGAACTGTTTATCTGCTAACAGGAACAGTGGGAATGCGTGGTTCTCTCCTAGCAGCTGTCCCCTCTGCTTCCTTGCAGCTGCAGAGGTTCATCCAGTGGCTGAGAGAGGCAGAAGAAGAGTCATCCGA
.............................................................................................................................((((....((((((((.((((.(((..((......))..)))....))))..))).))))).))))..................................................
.............................................................................................................................126..............................................................191................................................
SizePerfect hitTotal NormPerfect NormSRR402760(SRX117943)
source: ES E14 male cells. (ESC)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR306531(GSM750574)
19-24nt. (ago2 brain)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR306541(GSM750584)
19-24nt. (ago2 brain)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR206941(GSM723282)
other. (brain)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
GSM510450(GSM510450)
newborn_rep6. (total RNA)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR038743(GSM527278)
small RNA-Seq. (dicer brain)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)
SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
SRR073954(GSM629280)
total RNA. (blood)
SRR034120(GSM466730)
Mili IP_Tdrd9-/- replicate1. (mili testes)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
GSM509279(GSM509279)
MVH-/- E16.5 small RNA. (testes)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR402761(SRX117944)
source: ES E14 male cells. (ESC)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)
SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)
SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
mjTestesWT2()
Testes Data. (testes)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR525240(SRA056111/SRX170316)
Mus musculus domesticus miRNA sequencing. (ago1 Blood)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR037905(GSM510441)
brain_rep2. (brain)
SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
GSM510455(GSM510455)
newborn_rep11. (total RNA)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
GSM510454(GSM510454)
newborn_rep10. (total RNA)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR553603(SRX182809)
source: Spermatids. (Spermatids)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)
SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)
SRR069811(GSM610967)
small RNA sequencing; sample 3. (testes)
SRR059772(GSM562834)
CD4_Drosha. (spleen)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)
SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR206940(GSM723281)
other. (brain)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
....................................GGAAGAATCAACAGGTAAG.......................................................................................................................................................................................... 196.000.006.00------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................GCTTCCTTGCAGCTGCAGAGGTTCATCCA................................. 2911.001.00--------1.00----------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................GCAGCTGTCCCCTCTGGGA.......................................................... 191.000.00-------------------------------------------------------------------------------------1.00-----------------------------------
......................................AAGAATCAACAGGTAGCA......................................................................................................................................................................................... 181.000.00-----------------------------------------------------------1.00-------------------------------------------------------------
...................................................................................................................................ACAGGAACAGTGGGAATCTA.......................................................................................... 201.000.00-------------------------------1.00-----------------------------------------------------------------------------------------
....................................GGAAGAATCAACAGGTACGG......................................................................................................................................................................................... 201.000.00----------------------------------------------------------------1.00--------------------------------------------------------
..................................................................................................................................................................................................CAGAGGTTCATCCAGGGG............................. 181.000.00-----------------------1.00-------------------------------------------------------------------------------------------------