ID: uc007xfc.1
GENE: Trabd(2)
chr15:88911425-88911832+


(1)
AGO.mut 		(14)
AGO2.ip 		(1)
AGO3.ip 		(11)
B-CELL 		(36)
BRAIN 		(5)
CELL-LINE 		(3)
DCR.mut 		(1)
DGCR8.mut 		(12)
EMBRYO 		(4)
ESC 		(4)
FIBROBLAST 		(2)
HEART 		(2)
KIDNEY 		(11)
LIVER 		(1)
LUNG 		(5)
LYMPH 		(16)
OTHER 		(6)
OTHER.mut 		(1)
OVARY 		(2)
PANCREAS 		(1)
PIWI.ip 		(2)
SKIN 		(7)
SPLEEN 		(12)
TESTES 		(1)
THYMUS 		(2)
TOTAL-RNA 		(2)
UTERUS

Sense strand
CAGGAAGCTGCTGTCCAGCCATGGAGGGAGAGGAGAAGCCAGCTCAAGAGGTAAGGGGAGCTGAGGGTGTTGGAACGAACATCTTCCTAAACAACCTTTGTCCCAACCCAGCAACATCTGCTACTGCACACAGGAGGAGAGGGTCCCAGGGTGGGTCCCTTTAACTGCTTCTCTGCATATACTTAACTTAGTAACTAGGATATTTTATAGTCCAGCAAGAACTACCTCCATGGGAAAGCCCTGAGGCAAACGGACTCTTGAGCTTGCTAAGGAGGTACAACAGGCTGGAGTGTGCCTGACCTGTGGGGTGAGGCCGCAGGCGAGTGCTTGAACACTTACTTGAGCTCTCCCTCTGCAGGCTGACGTGGAACCTGTGGTAACAGCAGGCACCTCAGAAGCAGTGCCAAG
............................................................................................................................................................................................................................................................................................................(((..(((.(((((..((((..((((......))))..)))).)).))).)))..)))..................................................
........................................................................................................................................................................................................................................................................................................297..........................................................358................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		mjLiverWT3()
Liver Data. (liver)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		mjLiverWT1()
Liver Data. (liver)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		mjTestesWT3()
Testes Data. (testes)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR206940(GSM723281)
other. (brain)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (salivary gland)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		mjTestesWT4()
Testes Data. (testes)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		RuiDcrWT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR206941(GSM723282)
other. (brain)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR037897(GSM510433)
ovary_rep2. (ovary)		mjTestesWT2()
Testes Data. (testes)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR206939(GSM723280)
other. (brain)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR306538(GSM750581)
19-24nt. (ago2 brain)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR037906(GSM510442)
brain_rep3. (brain)		SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR206942(GSM723283)
other. (brain)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		mjTestesWT1()
Testes Data. (testes)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		GSM361408(GSM361408)
WholeCerebellum_P6_wt_rep1. (brain)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR077864(GSM637801)
18-30 nt small RNAs. (liver)		SRR553586(SRX182792)
source: Testis. (testes)
................................................................................................................................................................................................................................................................................................................................................TACTTGAGCTCTCCCTCTGCAGT.................................................231104.0075.0020.00-2.00-6.001.002.00--3.005.00-3.003.003.00-3.00-2.002.00-4.001.00--1.003.001.00---2.001.00----1.002.00--1.002.003.00--------1.00-1.00-1.001.00---1.00-1.001.001.001.00-1.00-1.00-1.00-1.001.00---1.00----1.001.00-----1.00-------1.00-1.00--1.00----------1.00---1.001.00--1.00--1.00-1.00---------
................................................................................................................................................................................................................................................................................................................................................TACTTGAGCTCTCCCTCTGCAG..................................................22175.0075.008.00-10.00--4.001.00----4.001.00-1.001.001.001.003.003.006.00-2.003.00--1.00-1.00-1.00-1.00--1.00-----2.001.00-1.001.00-1.001.00-1.002.00----1.00--1.001.00-2.00---1.00-1.001.001.00-----------------1.00-----------------------1.00-------------------------
................................................................................................................................................................................................................................................................................................................................................TACTTGAGCTCTCCCTCTGCAGC.................................................23153.0075.0011.0020.001.0011.00-1.001.00----1.00------------------------2.00-----------1.00----------------1.00---------------------1.00-----1.00--------------------1.00-----------------------
.................................................................................................................................................................................................................................................................................................................................................ACTTGAGCTCTCCCTCTGCAGT.................................................22147.0024.003.00-2.00-1.003.001.00-10.002.001.001.001.001.00-1.00--1.00--1.002.001.00-1.00-----1.00---------------1.00----1.001.001.00-----1.001.00-----1.00------------------------1.00----------1.00---1.00-1.00--------1.00------------1.00------
................................................................................................................................................................................................................................................................................................................................................TACTTGAGCTCTCCCTCTGCAGA.................................................23137.0075.00--3.001.00--1.004.00-4.001.001.00----1.00-------1.002.00--1.00-1.00------1.00--1.00----1.00---1.00-----2.00-----------1.00-1.00-------1.001.00----1.00-------------1.00--------1.00-1.00----------------1.00---1.00--------
.................................................................................................................................................................................................................................................................................................................................................ACTTGAGCTCTCCCTCTGCAG..................................................21124.0024.007.00---4.001.002.00----------1.00------1.00--3.00--1.00---------1.00------1.00----------------1.00------------------------1.00------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................ACTTGAGCTCTCCCTCTGCAGA.................................................22121.0024.00-6.001.00----6.00----------------1.00---2.00---1.00--1.00----------------------------------------------1.00-------1.00-------------------------1.00---------------------
...............................................................................................................................................................................................................................................................................................................................................TTACTTGAGCTCTCCCTCTGCAGT.................................................24113.004.002.0010.00--------1.00-------------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................ACTTGAGCTCTCCCTCTGCAGC.................................................2218.0024.006.00---------1.00-----------------------------------------------------------------1.00-------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................TGTGGGGTGAGGCCGCAGGCGA.....................................................................................2216.006.00-2.00-----------2.00----------1.00-----------1.00-----------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................TTACTTGAGCTCTCCCTCTGCAG..................................................2314.004.001.00-----1.00----------1.00-----1.00------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................................................................................................TGCCTGACCTGTGGGGTGAG................................................................................................2014.004.00-----------------------------4.00------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................TACTTGAGCTCTCCCTCTGCAT..................................................2213.001.00--1.00--1.00-------------------------------------------------------------------------------------------------------------------1.00----------------
................................................................................................................................................................................................................................................................................................................................................TACTTGAGCTCTCCCTCTGCAGAT................................................2412.0075.00------1.00------------------------------------------1.00----------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................ACTTGAGCTCTCCCTCTGCAGTAT...............................................2412.0024.00----------------------------------1.00-----------------------------------------------------------------------------------------1.00-------------
.................................................................................................................................................................................................................................................................................................................................................ACTTGAGCTCTCCCTCTGCAGAA................................................2312.0024.00--2.00---------------------------------------------------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................ACGTGGAACCTGTGGTAAC...........................1912.002.00-------------------------------------------------------------------------2.00----------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................TACTTGAGCTCTCCCTCTGCAGAA................................................2412.0075.00----------------------------------------1.00---------1.00---------------------------------------------------------------------------------------
.............................................................................................................................................................................................AGTAACTAGGATATTTTAT........................................................................................................................................................................................................1912.002.00---------------------------------------2.00--------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................TACTTGAGCTCTCCCTCTGC....................................................2012.002.00--1.00------------1.00--------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................ACTTGAGCTCTCCCTCTGCAGTA................................................2312.0024.00--------------------------------------------1.00--------------------------------------------------------------------1.00------------------------
................................................................................................................................................................................................................................................................................................................................................TACTTGAGCTCTCCCTCTGCAGTA................................................2412.0075.00-----------------------------------------------------1.00--------------------------------------------------------1.00---------------------------
.................................................................................................................................................................................................................................................................................................................................................ACTTGAGCTCTCCCTCTGC....................................................1912.002.00------------1.00--------------------------------------------------------------------------------------------------1.00--------------------------
.................................................................................................................................................................................................................................................................................................................................................ACTTGAGCTCTCCCTCTGCAGTAA...............................................2412.0024.00---------------------------------------------------------------------------------------------------------1.00-----------1.00--------------------
..........................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGGCACCTCAGAAGCAGT......2412.002.00---------------------------------2.00--------------------------------------------------------------------------------------------------------
..................................................................................................................................................................AACTGCTTCTCTGCACAG....................................................................................................................................................................................................................................181.000.00----------------------------------------------------------------------------------------------------------------------------------1.00-------
................................................................................................................................................................................................................................................................................................................................................TACTTGAGCTCTCCCTCTGCAGAG................................................2411.0075.00--------------------------------------------1.00---------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................TACTTGAGCTCTCCCTCTGCTT..................................................2211.002.00-------------------------------------1.00----------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................TGGGGTGAGGCCGCAGGCGAGTGT.................................................................................241.000.001.00-----------------------------------------------------------------------------------------------------------------------------------------
.....................................................................................................................................................................................................................................................................................................................................................................GGCTGACGTGGAACCTGTGGTAACA..........................2511.001.00------------------------------------------------------------------------1.00-----------------------------------------------------------------
.................................AGAAGCCAGCTCAAGAGGC....................................................................................................................................................................................................................................................................................................................................................................191.000.00----------------------------------------------------------1.00-------------------------------------------------------------------------------
................................................................................................................................................................................................................AGTCCAGCAAGAACTACCTCCAT.................................................................................................................................................................................2311.001.00----------------------------------1.00-------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................TACTTGAGCTCTCCCTCTGCAGTTT...............................................2511.0075.00------------------------1.00-----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................................................................................................TGTGGGGTGAGGCCGCAGG........................................................................................1911.001.00------------------------------1.00-----------------------------------------------------------------------------------------------------------
......................................................................................................................................................GTGGGTCCCTTTAACGTG................................................................................................................................................................................................................................................181.000.00-----------------------------------------------------------------------1.00------------------------------------------------------------------
........................AGGGAGAGGAGAAGCCTCG.............................................................................................................................................................................................................................................................................................................................................................................191.000.00--------------------------------------------------------------------------------------------------------------------------1.00---------------
................................................................................................................................................................................................................................................................................................................................................TACTTGAGCTCTCCCTCTGCAGTT................................................2411.0075.00------------1.00-----------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................GCTGGAGTGTGCCTGACCTGTGGGGT...................................................................................................2611.001.00-----------------------------------------------------------1.00------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................TTGAGCTCTCCCTCTGCAGATT...............................................2211.001.00-------------------------------------------------------------------------------------------------------------------------------1.00----------
...................................................................................................................................................................................................................................................................................................................................................TTGAGCTCTCCCTCTGCAGAC................................................2111.001.00---------------1.00--------------------------------------------------------------------------------------------------------------------------
............................................................................................................CAGCAACATCTGCTACCTGT........................................................................................................................................................................................................................................................................................201.000.00-----------------------------------------------------------------------1.00------------------------------------------------------------------
.............................................................TGAGGGTGTTGGAACGAACT.......................................................................................................................................................................................................................................................................................................................................201.000.00---------------------------------------------------------1.00--------------------------------------------------------------------------------
...................................................................................................................................................................................................TAGGATATTTTATAGTT....................................................................................................................................................................................................171.000.00--------------1.00---------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................TACTTGAGCTCTCCCTCTGCAGCAA...............................................2511.0075.00------------------------------------------------------------------------------------------------------------------------------------1.00-----
.........................................................................................................................................................................................................................................................................................................................................................................................................AGAAGCAGTGCCAAGAGCT191.000.00---------------------------------1.00--------------------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................................................................................................................................TTACTTGAGCTCTCCCTCTGCAGGCTG..............................................2711.001.00--------------------------------------------------------------------------------------1.00---------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................TACTTGAGCTCTCCCTCTGT....................................................201.000.00------------1.00-----------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................ACTTGAGCTCTCCCTCTGCAT..................................................211.000.00----------------1.00-------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................................................................................................................................................CGTGGAACCTGTGGTAACA..........................1911.001.00--------------------------------------1.00---------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................TTGAGCTCTCCCTCTGCAGAAC...............................................2211.001.001.00-----------------------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................................................................................................................................................................................................................................CTCTGCAGGCTGACGCGC........................................181.000.00----------------------------------------------1.00-------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................ACTTGAGCTCTCCCTCTGCAGAAT...............................................2411.0024.00------1.00-----------------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................................................................................................AAGCCCTGAGGCAAACGGACTCTTGA...................................................................................................................................................2611.001.00------------------------------------------------------------------------------------------------1.00-----------------------------------------
.......................................................................................................................................................................................................................................................................................................................................TTGAACACTTACTTGAGCTCTCCCTCTGCAG..................................................3111.001.00-----------1.00------------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................TACTTGAGCTCTCCCTCTGCAAT.................................................2311.001.00-------------------1.00----------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................GCAAGAACTACCTCCATG................................................................................................................................................................................1811.001.00---------------1.00--------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................ACTTGAGCTCTCCCTCTGCAGTTT...............................................2411.0024.00-------------------------1.00----------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................TACTTGAGCTCTCCCTCT......................................................1811.001.00---------------------------------------------------------------------------------------------------------------------------------------1.00--
....................................................................................................................................................................................................................................................................................................................................................................AGGCTGACGTGGAACCTGT.................................1911.001.00----------------------------------1.00-------------------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................................................................................................................................................TTGAGCTCTCCCTCTGCAG..................................................1911.001.00--1.00---------------------------------------------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................................................................................................CTGACCTGTGGGGTGACAGC.............................................................................................201.000.00----------------------------------------------1.00-------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................ACTTGAGCTCTCCCTCTGCAGTAAA..............................................2511.0024.00---------------------------------------------------------------1.00--------------------------------------------------------------------------
............................AGAGGAGAAGCCAGCTCAAGAGGC....................................................................................................................................................................................................................................................................................................................................................................241.000.00--------------------------------------------------------------------------------------------------------------------------------------1.00---
................................................................................................................................................................................................................................................................................................................................................................CTGCAGGCTGACGTGATTT.....................................191.000.00------------------------------------------------------------------------------------------------------1.00-----------------------------------
..........................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGGCACCTCAGA............1811.001.00---------------1.00--------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................TACTTGAGCTCTCCCTCTGCATTA................................................2411.001.00--------------------------------------------------------------------------------1.00---------------------------------------------------------
................AGCCATGGAGGGAGAGGAGAAGCCAGCT............................................................................................................................................................................................................................................................................................................................................................................2811.001.00-----------------1.00------------------------------------------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................................................................................................................................ACTTGAGCTCTCCCTCTGCAGCA................................................2311.0024.00----------------------------------------------------------------------------------------------------1.00-------------------------------------
.........................................................................................................................................................................................................................................................................................................................................................................................TAACAGCAGGCACCTCAGAAGTTC.......241.000.00---------------------------------------1.00--------------------------------------------------------------------------------------------------
....................................................................................................................................................................................ACTTAACTTAGTAACTAGGATAT.............................................................................................................................................................................................................2311.001.00-----------------1.00------------------------------------------------------------------------------------------------------------------------
.................GCCATGGAGGGAGAGGAGAAGCCAGCTCA..........................................................................................................................................................................................................................................................................................................................................................................2911.001.00-----------------1.00------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................TACTTGAGCTCTCCCTCTGCAGAAAA..............................................2611.0075.00-----------------------------------1.00------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................TACTTGAGCTCTCCCTCTGCAGTAT...............................................2511.0075.00----------------------------------------------------------1.00-------------------------------------------------------------------------------
................................................................................................................................................................................................................................................................................................................................................TACTTGAGCTCTCCCTCTGCA...................................................2111.001.00---------------------------------------------1.00--------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................................................................................................................................................................TGACGTGGAACCTGTGGTAACAGCAGGCT...................291.000.00----------------------------------------------------------------------------------------------1.00-------------------------------------------
....................ATGGAGGGAGAGGAGAAGC.................................................................................................................................................................................................................................................................................................................................................................................1920.500.50----------------------------------------------------------------------------------------------------------------------------------------0.50-

Antisense strand
CAGGAAGCTGCTGTCCAGCCATGGAGGGAGAGGAGAAGCCAGCTCAAGAGGTAAGGGGAGCTGAGGGTGTTGGAACGAACATCTTCCTAAACAACCTTTGTCCCAACCCAGCAACATCTGCTACTGCACACAGGAGGAGAGGGTCCCAGGGTGGGTCCCTTTAACTGCTTCTCTGCATATACTTAACTTAGTAACTAGGATATTTTATAGTCCAGCAAGAACTACCTCCATGGGAAAGCCCTGAGGCAAACGGACTCTTGAGCTTGCTAAGGAGGTACAACAGGCTGGAGTGTGCCTGACCTGTGGGGTGAGGCCGCAGGCGAGTGCTTGAACACTTACTTGAGCTCTCCCTCTGCAGGCTGACGTGGAACCTGTGGTAACAGCAGGCACCTCAGAAGCAGTGCCAAG
............................................................................................................................................................................................................................................................................................................(((..(((.(((((..((((..((((......))))..)))).)).))).)))..)))..................................................
........................................................................................................................................................................................................................................................................................................297..........................................................358................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR390297(GSM849855)
cell line: NIH-3T3cell type: fibroblastip ant. (fibroblast)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		mjLiverKO2()
Liver Data. (Zcchc11 liver)		mjLiverWT3()
Liver Data. (liver)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		mjLiverWT1()
Liver Data. (liver)		SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)		SRR553585(SRX182791)
source: Kidney. (Kidney)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		mjTestesWT3()
Testes Data. (testes)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR206940(GSM723281)
other. (brain)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)		SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)		SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)		SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (salivary gland)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		mjTestesWT4()
Testes Data. (testes)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR306530(GSM750573)
19-24nt. (ago2 brain)		SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)		SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR346420(SRX098261)
Global profiling of miRNA and the hairpin pre. (Uterus)		SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		RuiDcrWT(Rui)
DGCR8-dependent microRNA biogenesis is essent. (skin)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR206941(GSM723282)
other. (brain)		SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)		SRR037897(GSM510433)
ovary_rep2. (ovary)		mjTestesWT2()
Testes Data. (testes)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)		SRR206939(GSM723280)
other. (brain)		SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)		SRR037942(GSM510480)
293DroshaTN_cand5. (cell line)		SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)		SRR402762(SRX117945)
source: ES E14 male cells. (ESC)		SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)		SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)		SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)		SRR306538(GSM750581)
19-24nt. (ago2 brain)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)		SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)		SRR038740(GSM527275)
small RNA-Seq. (dicer brain)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)		SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		GSM640579(GSM640579)
small RNA in the liver with paternal Low pro. (liver)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)		SRR037906(GSM510442)
brain_rep3. (brain)		SRR065056(SRR065056)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR206942(GSM723283)
other. (brain)		SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		mjTestesWT1()
Testes Data. (testes)		SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)		SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)		GSM361408(GSM361408)
WholeCerebellum_P6_wt_rep1. (brain)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR042465(GSM539857)
mouse CD4+ T cells (spleen) [09-002]. (spleen)		SRR077864(GSM637801)
18-30 nt small RNAs. (liver)		SRR553586(SRX182792)
source: Testis. (testes)
..................................................................................................................................................................................................................................................................................................................................................................................CCTGTGGTAACAGCAAACT................... 191.000.00-------------------------------------------------------------------------------------------------------------------------------------1.00----
................................................................................................TTTGTCCCAACCCAGCACA..................................................................................................................................................................................................................................................................................................... 191.000.00--------------1.00---------------------------------------------------------------------------------------------------------------------------
......................................................................................................................................................................................................................................................CAAACGGACTCTTGATT................................................................................................................................................. 171.000.00----------------------------------------------1.00-------------------------------------------------------------------------------------------
..............CCAGCCATGGAGGGACGCA....................................................................................................................................................................................................................................................................................................................................................................................... 191.000.00-----------------------------------------------------------------------------------------------1.00------------------------------------------
....................................................................................................................................................................................................................................................................................................................................................TGAGCTCTCCCTCTGTGC.................................................. 181.000.00---------------------------------------------------------------------------------1.00--------------------------------------------------------
....................................AGCCAGCTCAAGAGGTGTA................................................................................................................................................................................................................................................................................................................................................................. 191.000.00--------------------------------------------------------------------------------------------------1.00---------------------------------------
.......................................................................................................................................................................................................................................................................................................................................................................................................TCAGAAGCAGTGCCA.. 15100.100.10-----------------------------------------------------------------------------------------------------------------------------------------0.10