ID: uc007wjl.2
GENE: Grina(3)
chr15:76078749-76078928+


(11)
AGO2.ip 		(1)
AGO3.ip 		(2)
B-CELL 		(28)
BRAIN 		(5)
CELL-LINE 		(3)
DCR.mut 		(2)
DGCR8.mut 		(9)
EMBRYO 		(3)
ESC 		(3)
FIBROBLAST 		(1)
HEART 		(2)
KIDNEY 		(5)
LIVER 		(1)
LUNG 		(16)
OTHER 		(6)
OTHER.mut 		(1)
OVARY 		(1)
PIWI.mut 		(1)
SKIN 		(2)
SPLEEN 		(15)
TESTES 		(5)
TOTAL-RNA

Sense strand
TCCCTGCTGTCAACTGGGACAAGAACATTCGCCAGGCCTTTATCAGAAAGGTTGGGCCTGGCATATGTGTGGTGTGGGAGGAGCCACAAGGAGGCCGCCAAGGCGGGGCTCTGATTGGCTCCTTCCCCAGGTGTTCCTGGTGCTGACCCTGCAGCTGTCGGTGACCCTGTCCACTGTGGC
.....................................................................(((...(((((((((((...((((.((((....)).)).))))...))))))))))))))...................................................
...................................................................68............................................................130................................................
SizePerfect hitTotal NormPerfect NormSRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		mjTestesWT1()
Testes Data. (testes)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		mjLiverWT2()
Liver Data. (liver)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR073955(GSM629281)
total RNA. (blood)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR073954(GSM629280)
total RNA. (blood)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR206941(GSM723282)
other. (brain)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR553585(SRX182791)
source: Kidney. (Kidney)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		GSM509276(GSM509276)
small RNA cloning by length. (testes)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		mjTestesWT2()
Testes Data. (testes)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR206940(GSM723281)
other. (brain)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR206942(GSM723283)
other. (brain)		mjTestesWT3()
Testes Data. (testes)		SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR037899(GSM510435)
ovary_rep4. (ovary)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR023849(GSM307158)
NPCsmallrna_rep1. (cell line)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR037907(GSM510443)
brain_rep4. (brain)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		GSM361402(GSM361402)
CGNP_P6_p53--_Ink4c--_rep5. (brain)		SRR306543(GSM750586)
19-24nt. (ago2 brain)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		GSM361395(GSM361395)
CGNP_P6_wt_rep2. (brain)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR206939(GSM723280)
other. (brain)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR553603(SRX182809)
source: Spermatids. (Spermatids)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
.............................................................................................................TCTGATTGGCTCCTTCCCCAGT.................................................22165.0011.00-9.004.00---6.00--3.00---1.004.00--4.002.003.00-2.001.003.00-2.002.00--2.001.001.00--2.002.00--1.00-1.00--1.001.00----1.00------1.001.00-1.00---------------1.00----1.00--1.00---------------
..................................................GTTGGGCCTGGCATATGTGTGGTGTGGGAGGAGCCACAAGGAGGCCGCCAAGGCGGGGCTCTGATTGGCTCCTTCCCCAG..................................................80147.0047.0047.00--------------------------------------------------------------------------------------------------
.......................................................................................................................................................CAGCTGTCGGTGACCCTGTCCACTGTGGC29117.0017.00---17.00-----------------------------------------------------------------------------------------------
..................................................GTTGGGCCTGGCATATGTGTGGTGTGGGAGGAGCCACAAGGAGGCCGCCAAGGCGGGGCTCTGATTGGCTCCTTCCCCCG..................................................80112.004.0012.00--------------------------------------------------------------------------------------------------
.............................................................................................................TCTGATTGGCTCCTTCCCCAG..................................................21111.0011.00--1.00------2.00---------1.00----3.00----1.00----------------------------1.00-----------1.00-----1.00----------------------
.............................................................................................................TCTGATTGGCTCCTTCCCCAGA.................................................2218.0011.00-2.002.00-----------1.00-------1.00---------------------1.00-----------------1.00------------------------------------
..................................................GTTGGGCCTGGCATATGTGTGGTGTGGGAGGAGCCACAAGGAGGCCGCCAAGGCGGGGCTCTGATTGGCTCCTTCCCCA...................................................7917.007.007.00--------------------------------------------------------------------------------------------------
..................................................GTTGGGCCTGGCATATGTGTGGTGTGGGAGGAGCCACAAGGAGGCCGCCAAGGCGGGGCTCTGATTGGCTCCTTCCCCAGT.................................................8117.0047.007.00--------------------------------------------------------------------------------------------------
........................................................................TGTGGGAGGAGCCACAAGGAGGC.....................................................................................2316.006.00--1.00-----3.00----------------------------------------------------1.00----------------1.00--------------------
.................GACAAGAACATTCGCCAGGC...............................................................................................................................................2016.006.00------------6.00--------------------------------------------------------------------------------------
........................................................................TGTGGGAGGAGCCACAAGGAGG......................................................................................2215.005.00--2.00-----1.00-1.00-------------------1.00--------------------------------------------------------------------
.....GCTGTCAACTGGGACAAGAACATTCGCC...................................................................................................................................................2814.004.00-4.00-------------------------------------------------------------------------------------------------
..................................................GTTGGGCCTGGCATATGTGTGGTGTGGGAGGAGCCACAAGGAGGCCGCCAAGGCGGGGCTCTGATTGGCTCCTTCCCC....................................................7814.004.004.00--------------------------------------------------------------------------------------------------
........................................................................TGTGGGAGGAGCCACAAGGAG.......................................................................................2114.004.00--1.00------------------1.00-----------2.00-----------------------------------------------------------------
..........................................................................................................................................................CTGTCGGTGACCCTGTCCACTGTGGC2613.003.00-----1.00---1.00-----------------1.00-----------------------------------------------------------------------
..............................................................................................................................................CTGACCCTGCAGCTGTCGG...................1913.003.00-3.00-------------------------------------------------------------------------------------------------
............ACTGGGACAAGAACATTCGCCAGGC...............................................................................................................................................2513.003.00-------1.00---------------------------------2.00---------------------------------------------------------
..................................................GTTGGGCCTGGCATATGTGTGGTGTGGGAGGAGCCACAAGGAGGCCGCCAAGGCGGGGCTCTGATTGGCTCCTTCCCCAGAA................................................8213.0047.003.00--------------------------------------------------------------------------------------------------
...............GGGACAAGAACATTCGCCAGGCC..............................................................................................................................................2313.003.00----1.001.00--------------------------1.00------------------------------------------------------------------
........................................................................TGTGGGAGGAGCCACAAGGAGGCAT...................................................................................2512.006.00--------1.00-1.00----------------------------------------------------------------------------------------
..........................................................................TGGGAGGAGCCACAAGGAGGC.....................................................................................2112.002.00--------1.00------------------------------------------------------------------------------------1.00-----
...............GGGACAAGAACATTCGCC...................................................................................................................................................1812.002.00----1.00----1.00-----------------------------------------------------------------------------------------
..................................................GTTGGGCCTGGCATATGTGTGGTGTGGGAGGAGCCACAAGGAGGCCGCCAAGGCGGGGCTCTGATTGGCTCCTTCCCCAGTT................................................8212.0047.002.00--------------------------------------------------------------------------------------------------
..............TGGGACAAGAACATTCGC....................................................................................................................................................1812.002.00-------1.00-------1.00-----------------------------------------------------------------------------------
..........................ATTCGCCAGGCCTTTATCAGAAAG..................................................................................................................................2412.002.00--------------------2.00------------------------------------------------------------------------------
.............................................................................................................................................GCTGACCCTGCAGCTAAT.....................182.000.00--------------------------1.00------------------1.00-----------------------------------------------------
.............................................................................................................TCTGATTGGCTCCTTCCCCAA..................................................212.000.00-------------2.00-------------------------------------------------------------------------------------
....................................................................................................................................................CTGCAGCTGTCGGTGACCCTGTCCACT.....2712.002.00----------------2.00----------------------------------------------------------------------------------
........................................................................TGTGGGAGGAGCCACAAGGA........................................................................................2012.002.00--1.00----------------------------------------------------1.00-------------------------------------------
..................................................................................................................................................................GACCCTGTCCACTGTGGC1812.002.00----1.00----------------------------------------------------------1.00-----------------------------------
..................................................GTTGGGCCTGGCATATGTGTGGTGTGGGAGGAGCCACAAGGAGGCCGCCAAGGCGGGGCTCTGATTGGCTCCTTCCCCAGTTT...............................................8312.0047.002.00--------------------------------------------------------------------------------------------------
........................................................................TGTGGGAGGAGCCACAAGGAGA......................................................................................2212.004.00-----------1.00-------------------------------------------------------------------------------1.00-------
...................CAAGAACATTCGCCAGGC...............................................................................................................................................1812.002.00--------------------2.00------------------------------------------------------------------------------
.....GCTGTCAACTGGGACAAGAACATTCGCCAGGC...............................................................................................................................................3212.002.00----1.00--1.00-------------------------------------------------------------------------------------------
.............................................................................................................TCTGATTGGCTCCTTCCCCAGTAG...............................................2412.0011.00--1.00-------------------------1.00----------------------------------------------------------------------
..................................................GTTGGGCCTGGCATATGTGTGGTGTGGGAGGAGCCACAAGGAGGCCGCCAAGGCGGGGCTCTGATTGGCTCCTTCCCCAGAAA...............................................8312.0047.002.00--------------------------------------------------------------------------------------------------
..........CAACTGGGACAAGAACATTCGCCAGGCCTTT...........................................................................................................................................3112.002.00------------------------------------------2.00--------------------------------------------------------
.............CTGGGACAAGAACATTCGC....................................................................................................................................................1912.002.00-----1.00----------------------1.00----------------------------------------------------------------------
..................................................GTTGGGCCTGGCATATGTGTGGTGTGGGAGGAGCCACAAGGAGGCCGCCAAGGCGGGGCTCTGATTGGCTCCTTCCCCC...................................................7912.004.002.00--------------------------------------------------------------------------------------------------
..................................................GTTGGGCCTGGCATATGTGTGGTGTGGGAGGAGCCACAAGGAGGCCGCCAAGGCGGGGCTCTGATTGGCTCCTTCCCCCA..................................................8012.004.002.00--------------------------------------------------------------------------------------------------
...............GGGACAAGAACATTCGCCAGGC...............................................................................................................................................2212.002.00------1.00--------1.00-----------------------------------------------------------------------------------
................................................................................................................................AGGTGTTCCTGGTGCTGA..................................1821.501.50----------------1.50----------------------------------------------------------------------------------
......................................................................................................................................................GCAGCTGTCGGTGACCCTGT..........2011.001.00----------------------------1.00----------------------------------------------------------------------
..........CAACTGGGACAAGAACATTCGCC...................................................................................................................................................2311.001.00---------------------------------------1.00-----------------------------------------------------------
.............CTGGGACAAGAACATTCGCCAGGCCTTTA..........................................................................................................................................2911.001.00----------------------------------------------------------------------------------------------1.00----
.......................................................................................................................................CCTGGTGCTGACCCTGCAG..........................1911.001.00-----1.00---------------------------------------------------------------------------------------------
........GTCAACTGGGACAAGAACATTCGCCAGGC...............................................................................................................................................2911.001.00-------1.00-------------------------------------------------------------------------------------------
...............GGGACAAGAACATTCGCCA..................................................................................................................................................1911.001.00-----------------------------------------------------------------1.00---------------------------------
..........................................................................TGGGAGGAGCCACAAGGAGGCC....................................................................................2211.001.00-------------------------------------1.00-------------------------------------------------------------
.............................................................................................................TCTGATTGGCTCCTTCCCCAGAT................................................2311.0011.00---------------------------------------------------1.00-----------------------------------------------
........................................................................TGTGGGAGGAGCCACAAGGAGGCC....................................................................................2411.001.00--1.00------------------------------------------------------------------------------------------------
.....................................................................................................................................................TGCAGCTGTCGGTGACCCTA...........201.000.00-------------------------------------------------------------------------------1.00-------------------
.....GCTGTCAACTGGGACAAGAA...........................................................................................................................................................2011.001.00-------------------------------------1.00-------------------------------------------------------------
........................................................................TGTGGGAGGAGCCACAAGGAGGCT....................................................................................2411.006.00--------1.00------------------------------------------------------------------------------------------
...................................................................................................................................TGTTCCTGGTGCTGACCCTGCAGCTGTCGG...................3011.001.00----1.00----------------------------------------------------------------------------------------------
.............................................................................................................TCTGATTGGCTCCTTCCCCAAA.................................................221.000.00-----------------------------------------------------------------------1.00---------------------------
..............TGGGACAAGAACATTCGCCAGGCCTT............................................................................................................................................2611.001.00-----1.00---------------------------------------------------------------------------------------------
................................................................................................................................AGGTGTTCCTGGTGCTTT..................................181.000.00------------------------------------------------------1.00--------------------------------------------
..................................................GTTGGGCCTGGCATATGTGT..............................................................................................................2011.001.00---------------------------------------------------------------------------------1.00-----------------
..........................................................................................................................................GGTGCTGACCCTGCAGCTGTCGGT..................2411.001.00------------------------------1.00--------------------------------------------------------------------
.............................................................................................................TCTGATTGGCTCCTTCCCCATA.................................................221.000.00------------------------------------------------------------------------------------------1.00--------
...............GGGACAAGAACATTCGC....................................................................................................................................................1711.001.00-------------------------------------------1.00-------------------------------------------------------
..................................................GTTGGGCCTGGCATATGTGTGGTGTGGGAGGAGCCACAAGGAGGCCGCCAAGGCGGGGCTCTGATTGGCTCCTTCCCCAC..................................................8011.007.001.00--------------------------------------------------------------------------------------------------
..........................................................................TGGGAGGAGCCACAAGGAGGCAA...................................................................................2311.002.00--------------------------------------------------------------------------------------1.00------------
............ACTGGGACAAGAACATTCGCC...................................................................................................................................................2111.001.00----1.00----------------------------------------------------------------------------------------------
...............GGGACAAGAACATTCGCCAGG................................................................................................................................................2111.001.00-----1.00---------------------------------------------------------------------------------------------
.............................................................................................................TCTGATTGGCTCCTTCCCCAGTATT..............................................2511.0011.00------1.00--------------------------------------------------------------------------------------------
....................................................................................................................................GTTCCTGGTGCTGACCCTGCAG..........................2211.001.00---------------1.00-----------------------------------------------------------------------------------
..........CAACTGGGACAAGAACATTCGCCAGGCC..............................................................................................................................................2811.001.00----1.00----------------------------------------------------------------------------------------------
........................................................................TGTGGGAGGAGCCACAAGGAGGTACT..................................................................................2611.005.00--1.00------------------------------------------------------------------------------------------------
......CTGTCAACTGGGACAAGAACATTC......................................................................................................................................................2411.001.00---------------------------------------------------------------------------------------1.00-----------
..............TGGGACAAGAACATTCGCCAGGCC..............................................................................................................................................2411.001.00----------1.00----------------------------------------------------------------------------------------
..................................................GTTGGGCCTGGCATATGTGTGGTGTGGGAGGAGCCACAAGGAGGCCGCCAAGGCGGGGCTCTGATTGGCTCCTTCCCCAGAT................................................8211.0047.001.00--------------------------------------------------------------------------------------------------
...............GGGACAAGAACATTCGCCAGGCCTT............................................................................................................................................2511.001.00----1.00----------------------------------------------------------------------------------------------
..................................................GTTGGGCCTGGCATATGTGTGGTGTGGGAGGAGCCACAAGGAGGCCGCCAAGGCGGGGCTCTGATTGGCTCCTTCCCCAGA.................................................8111.0047.001.00--------------------------------------------------------------------------------------------------
............................................................................................................................................TGCTGACCCTGCAGCTG.......................1711.001.00------------------------------------1.00--------------------------------------------------------------
.......................................................................GTGTGGGAGGAGCCACAAGGAGG......................................................................................2311.001.00----------1.00----------------------------------------------------------------------------------------
....TGCTGTCAACTGGGACAAGAACATTC......................................................................................................................................................2611.001.00--------------------------------------------------------------------1.00------------------------------
....................AAGAACATTCGCCAGGCCTT............................................................................................................................................2011.001.00--------------------------------------------------------------------------------------------1.00------
................................CAGGCCTTTATCAGATC...................................................................................................................................171.000.00-----------------------------------------------1.00---------------------------------------------------
..................ACAAGAACATTCGCCAGG................................................................................................................................................1811.001.00------1.00--------------------------------------------------------------------------------------------
..........................................................................................................................................GGTGCTGACCCTGCAGCTGTCG....................2211.001.00-------------------------------------------------------------------------1.00-------------------------
.................GACAAGAACATTCGCCAG.................................................................................................................................................1811.001.00-------1.00-------------------------------------------------------------------------------------------
.................................................................................................CCAAGGCGGGGCTCTTTTT................................................................191.000.00----------------------------------------------------------------------------------1.00----------------
.............................................................................................................TCTGATTGGCTCCTTCCCCATT.................................................221.000.00-------------------------------1.00-------------------------------------------------------------------
..........CAACTGGGACAAGAACT.........................................................................................................................................................171.000.00----------------------------------------------------------------1.00----------------------------------
.........................................................................................................................................................GCTGTCGGTGACCCTGTC.........1811.001.00----1.00----------------------------------------------------------------------------------------------
..............TGGGACAAGAACATTCGCCAGGCCTTTATC........................................................................................................................................3011.001.00-----1.00---------------------------------------------------------------------------------------------
.............................................................................................................TCTGATTGGCTCCTTCCCCAAT.................................................221.000.00-------------------------1.00-------------------------------------------------------------------------
.......................................................................................................................................................CAGCTGTCGGTGACCCTGTCCACTGCGGC291.000.00---1.00-----------------------------------------------------------------------------------------------
.......................................................................................................................................................CAGCTGTCGGTGACCCTGTCCACTGTGG.2811.001.00-------1.00-------------------------------------------------------------------------------------------
..............................................AAAGGTTGGGCCTGGCCTT...................................................................................................................191.000.00----------------------------------------------1.00----------------------------------------------------
....................................................................................................AGGCGGGGCTCTGATTGGC.............................................................1911.001.00---------------------------1.00-----------------------------------------------------------------------
..............................................AAAGGTTGGGCCTGGAAA....................................................................................................................181.000.00-------------------------------------------------------------------------------------1.00-------------
.............................................................................................................TCTGATTGGCTCCTTCCCAAGT.................................................221.000.00----------------------1.00----------------------------------------------------------------------------
............................................................................................................................................................GTCGGTGACCCTGTCCACTGT...2111.001.00------------------------------------------------------------------------------------1.00--------------
................GGACAAGAACATTCGCCAGGC...............................................................................................................................................2111.001.00-------1.00-------------------------------------------------------------------------------------------
........................................................................TGTGGGAGGAGCCACAAGGAAA......................................................................................2211.002.00------------------1.00--------------------------------------------------------------------------------
.............................................................................................................TCTGATTGGCTCCTTCCCCAGTAT...............................................2411.0011.00-----------------------------------------------------------------------------1.00---------------------
........................................................................TGTGGGAGGAGCCACAAGGAA.......................................................................................2111.002.00----------1.00----------------------------------------------------------------------------------------
.......................................................................GTGTGGGAGGAGCCACAAGGAGA......................................................................................231.000.00----------1.00----------------------------------------------------------------------------------------
....................................................................................................................................................CTGCAGCTGTCGGTGACCCTGTCC........2411.001.00--------------------------------1.00------------------------------------------------------------------
....TGCTGTCAACTGGGACAAGAAC..........................................................................................................................................................2211.001.00----1.00----------------------------------------------------------------------------------------------
........................................................................TGTGGGAGGAGCCACAAGG.........................................................................................1931.001.00---------0.33----0.33----------------------------------------------------------------------------------0.33-
.............CTGGGACAAGAACATTCG.....................................................................................................................................................1811.001.00-----1.00---------------------------------------------------------------------------------------------
..............TGGGACAAGAACATTCGCC...................................................................................................................................................1911.001.00-------1.00-------------------------------------------------------------------------------------------
..............................................................................................................................................CTGACCCTGCAGCTGTCGGTG.................2111.001.00---------1.00-----------------------------------------------------------------------------------------
.............................................................................................................TCTGATTGGCTCCTTCCCC....................................................1911.001.00--1.00------------------------------------------------------------------------------------------------
........................................................................................................................................................AGCTGTCGGTGACCCTGTCCACTGTGGC2811.001.00----------------------------------------1.00----------------------------------------------------------
.................................................................................................................................................ACCCTGCAGCTGTCGGTGACCCTGTCCA.......2811.001.00---------------1.00-----------------------------------------------------------------------------------
..................................................GTTGGGCCTGGCATATGTGTGGTGTGGGAGGAGCCACAAGGAGGCCGCCAAGGCGGGGCTCTGATTGGCTCCTTTCC.....................................................771.000.001.00--------------------------------------------------------------------------------------------------
.............................................................................................................TCTGATTGGCTCCTTCCCCAGTA................................................2311.0011.00------------------1.00--------------------------------------------------------------------------------
...............................................AAGGTTGGGCCTGGCATAT..................................................................................................................1911.001.00------1.00--------------------------------------------------------------------------------------------
.....................................................................................................................................................TGCAGCTGTCGGTGACCCTGTCCACA.....261.000.00----------------------------------------------------------------------------------------1.00----------
.........................................................................GTGGGAGGAGCCACAAGGAG.......................................................................................2011.001.00-----------------------------------------------------1.00---------------------------------------------
........GTCAACTGGGACAAGAAC..........................................................................................................................................................1821.001.00----0.50----------------0.50-----------------------------------------------------------------------------
.............................................................................................................TCTGATTGGCTCCTTCCCCAGC.................................................2211.0011.00--1.00------------------------------------------------------------------------------------------------
............................................................................................................CTCTGATTGGCTCCTTCCCCAG..................................................2211.001.00----------------------------------------------------1.00----------------------------------------------
.....GCTGTCAACTGGGACAAGAACATTCGCCAGGCC..............................................................................................................................................3311.001.00-----------------------------------------------------------------------------------------1.00---------
..................................................GTTGGGCCTGGCATATGTGTGGTGTGGGAGGAGCCACAAGGAGGCCGCCAAGGCGGGGCTCTGATTGGCTCCTTCCCCCGT.................................................8111.004.001.00--------------------------------------------------------------------------------------------------
........................................................................TGTGGGAGGAGCCACAAGGAAG......................................................................................2211.002.00--------------------------------------------------------------------------1.00------------------------
..................................................................................................................................GTGTTCCTGGTGCTGACC................................1811.001.00---------------1.00-----------------------------------------------------------------------------------
................................................................................................................................................................GTGACCCTGTCCACTGTGG.1911.001.00-------1.00-------------------------------------------------------------------------------------------
................................................................................................................................................GACCCTGCAGCTGTCGGTGACCCTGTCCACTG....3211.001.00-----1.00---------------------------------------------------------------------------------------------
.....................................................GGGCCTGGCATATGTGGCTA...........................................................................................................201.000.00-----------1.00---------------------------------------------------------------------------------------
....................................................................................................................................................CTGCAGCTGTCGGTGACCCTG...........2111.001.00------------------------------------------------1.00--------------------------------------------------
.......................................TTATCAGAAAGGTTGGGC...........................................................................................................................1811.001.00-----------1.00---------------------------------------------------------------------------------------
....................AAGAACATTCGCCAGGC...............................................................................................................................................1711.001.00-----------1.00---------------------------------------------------------------------------------------
...............................................................................................................................................................GGTGACCCTGTCCACTGTGGC2111.001.00----1.00----------------------------------------------------------------------------------------------
..........CAACTGGGACAAGAACATTC......................................................................................................................................................2011.001.00-------------1.00-------------------------------------------------------------------------------------
................................................................................................................................................GACCCTGCAGCTGTCGGTGACCCTGTCCA.......2911.001.00------------------------------------------------------------------1.00--------------------------------
............................................................................................................CTCTGATTGGCTCCTTCCCCAGA.................................................2311.001.00--1.00------------------------------------------------------------------------------------------------
...............................................AAGGTTGGGCCTGGCATATGTGTGGTGTGGGAGGG..................................................................................................351.000.00-----1.00---------------------------------------------------------------------------------------------
......................................................................................................................................................GCAGCTGTCGGTGACCCTGTCCACT.....2511.001.00---------------------------------------1.00-----------------------------------------------------------
...........................................................................................................................................................TGTCGGTGACCCTGTCCACTGTGG.2411.001.00----------------1.00----------------------------------------------------------------------------------
.........................................................................................................................................TGGTGCTGACCCTGCAGCTGTC.....................2211.001.00-----------1.00---------------------------------------------------------------------------------------
....................................................................................................................................................CTGCAGCTGTCGGTGACCC.............1911.001.00--------------------------------------------------1.00------------------------------------------------
..................................................GTTGGGCCTGGCATATGTGTGGTGTGGGAGGAGCCACAAGGAGGCCGCCAAGGCGGGGCTCTGATTGGCTCCTTCC......................................................7611.001.001.00--------------------------------------------------------------------------------------------------
.........................................................................................................................................................GCTGTCGGTGACCCTGTCCACTGTGGC2711.001.00-----1.00---------------------------------------------------------------------------------------------
............................................................................................................................................................GTCGGTGACCCTGTCCACTGTGGC2411.001.00------------------------------------1.00--------------------------------------------------------------
...................................................................................................AAGGCGGGGCTCTGATTGGCTCCTTCC......................................................2711.001.00------------------------------------------------------------1.00--------------------------------------
.............................................................................................................TCTGATTGGCTCCTTCCCCAT..................................................211.000.00-------------------------------------------------------------------1.00-------------------------------
.CCCTGCTGTCAACTGGGACAAGAACATTCGCCAGG................................................................................................................................................3511.001.00-----1.00---------------------------------------------------------------------------------------------
.....................AGAACATTCGCCAGGCCTT............................................................................................................................................1911.001.00----1.00----------------------------------------------------------------------------------------------
...................CAAGAACATTCGCCAGGCCT.............................................................................................................................................2011.001.00---------------------------1.00-----------------------------------------------------------------------
...CTGCTGTCAACTGGGA.................................................................................................................................................................1620.500.50-----------------------------------------------------------------------------------------------0.50---
....TGCTGTCAACTGGGAC................................................................................................................................................................1620.500.50----0.50----------------------------------------------------------------------------------------------
...............................................AAGGTTGGGCCTGGCAT....................................................................................................................1720.500.50-------------0.50-------------------------------------------------------------------------------------
..............................................................................................................CTGATTGGCTCCTTCCCCAG..................................................2020.500.50------------------------------------------------------------------------------------------------0.50--
........................................................................TGTGGGAGGAGCCACAAGGCGA......................................................................................2230.331.00--------------------------------------------------------------------------------------------------0.33
.....GCTGTCAACTGGGAC................................................................................................................................................................1550.200.20----0.20----------------------------------------------------------------------------------------------
.........TCAACTGGGACAAGAA...........................................................................................................................................................1660.170.17----0.17----------------------------------------------------------------------------------------------

Antisense strand
TCCCTGCTGTCAACTGGGACAAGAACATTCGCCAGGCCTTTATCAGAAAGGTTGGGCCTGGCATATGTGTGGTGTGGGAGGAGCCACAAGGAGGCCGCCAAGGCGGGGCTCTGATTGGCTCCTTCCCCAGGTGTTCCTGGTGCTGACCCTGCAGCTGTCGGTGACCCTGTCCACTGTGGC
.....................................................................(((...(((((((((((...((((.((((....)).)).))))...))))))))))))))...................................................
...................................................................68............................................................130................................................
SizePerfect hitTotal NormPerfect NormSRR346421(SRX098263)
Global profiling of miRNA and the hairpin pre. (mixture)		mjTestesWT1()
Testes Data. (testes)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		mjLiverWT2()
Liver Data. (liver)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR073955(GSM629281)
total RNA. (blood)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR073954(GSM629280)
total RNA. (blood)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjTestesKO8()
Testes Data. (Zcchc11 testes)		SRR390300(GSM849858)
cell line: NIH-3T3cell type: fibroblastinfect. (ago2 fibroblast)		SRR206941(GSM723282)
other. (brain)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)		SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR553585(SRX182791)
source: Kidney. (Kidney)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		GSM509276(GSM509276)
small RNA cloning by length. (testes)		SRR306531(GSM750574)
19-24nt. (ago2 brain)		mjTestesWT2()
Testes Data. (testes)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR206940(GSM723281)
other. (brain)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR206942(GSM723283)
other. (brain)		mjTestesWT3()
Testes Data. (testes)		SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)		SRR553584(SRX182790)
source: Heart. (Heart)		SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR037899(GSM510435)
ovary_rep4. (ovary)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		SRR402760(SRX117943)
source: ES E14 male cells. (ESC)		SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)		SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)		SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR059775(GSM562837)
MEF_Drosha. (MEF)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR023849(GSM307158)
NPCsmallrna_rep1. (cell line)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR037907(GSM510443)
brain_rep4. (brain)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR029037(GSM433289)
18dpp_homo_tdrd6-KO. (tdrd6 testes)		SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		GSM361402(GSM361402)
CGNP_P6_p53--_Ink4c--_rep5. (brain)		SRR306543(GSM750586)
19-24nt. (ago2 brain)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)		GSM361395(GSM361395)
CGNP_P6_wt_rep2. (brain)		SRR059772(GSM562834)
CD4_Drosha. (spleen)		SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR039183(GSM485323)
shLuc.1309 (-dox). (fibroblast)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR206939(GSM723280)
other. (brain)		SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)		SRR039186(GSM485326)
shLuc.1309;ROSA-rtTA (+dox). (fibroblast)		SRR553603(SRX182809)
source: Spermatids. (Spermatids)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		SRR037905(GSM510441)
brain_rep2. (brain)		SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)		SRR037920(GSM510458)
e12p5_rep2. (embryo)		GSM509280(GSM509280)
small RNA cloning by length. (testes)		SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)		SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)		SRR306535(GSM750578)
19-24nt. (ago2 brain)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
.........................CATTCGCCAGGCCTTGGAT........................................................................................................................................ 193.000.00--------2.00-----------------------------1.00------------------------------------------------------------
.................................................................................................................................................ACCCTGCAGCTGTCGGTGA................ 1912.002.00---------------------------------------------------------------------1.00--1.00--------------------------
.......................AACATTCGCCAGGCCTTT........................................................................................................................................... 1811.001.00-----------1.00---------------------------------------------------------------------------------------
...................................................................................................................................................CCTGCAGCTGTCGGTCTTT.............. 191.000.00-------------1.00-------------------------------------------------------------------------------------