ID: uc007pkt.1
GENE: Dip2c(1)
chr13:9493880-9494129+


(12)
AGO2.ip 		(2)
B-CELL 		(27)
BRAIN 		(5)
CELL-LINE 		(1)
DCR.mut 		(1)
DGCR8.mut 		(7)
EMBRYO 		(6)
ESC 		(1)
FIBROBLAST 		(2)
HEART 		(1)
KIDNEY 		(2)
LIVER 		(1)
LUNG 		(4)
OTHER 		(2)
OTHER.mut 		(1)
SPLEEN 		(6)
TESTES 		(3)
TOTAL-RNA

Sense strand
GCAGTTACTGGCTTACCTGTAATATTTCTGACGCCTTCACTGGTCAGGCACTGGCTGGGACAGAGGGTGTCTGCACCGATTGAAGCCCTTGGTGGTCTGTGTGCTGTTTCTGCATGGGGTCGGCAGCTCTGCTCAGCGCTGTAACAAATTTAAAAAAAACTAAAGTCTGAATTAATTAGTTTTTTTTCAACTTGTTACAGCAGCGAATGGAGCTGCCGTGGTTCGGTGTAGACTGCAGCCCGGTGAAGGC
.......................................................................................................................................((((((((((((.((.((((((((((((............)))))))))))).)).)))))))))).))..............................................
......................................................................................................................................135.....................................................................207.........................................
SizePerfect hitTotal NormPerfect NormSRR394083(GSM855969)
background strain: C57BL6/SV129cell type: KRa. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR206942(GSM723283)
other. (brain)		SRR206940(GSM723281)
other. (brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		GSM416732(GSM416732)
MEF. (cell line)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR037906(GSM510442)
brain_rep3. (brain)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR206941(GSM723282)
other. (brain)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR037905(GSM510441)
brain_rep2. (brain)		GSM510454(GSM510454)
newborn_rep10. (total RNA)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR095855BC2(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR306538(GSM750581)
19-24nt. (ago2 brain)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
....................................................................................................................................................................................TTTTTTTCAACTTGTTACAGAGA...............................................2329.000.0029.00-------------------------------------------------------------------
...........................................................................................................................................TGTAACAAATTTAAAAAAAACT.........................................................................................22116.0016.00----1.00---1.00-1.002.00--2.00----------1.00---1.00----------1.00-----1.00---1.00-1.00-1.001.00----1.00-------
...................................................................................................................................................................................TTTTTTTTCAACTTGTTACAGT.................................................22114.005.00--2.004.00---1.00-1.00---1.00--------1.00----1.00-1.00----1.00--------------------------1.00------
...................................................................................................................................................................................TTTTTTTTCAACTTGTTACAGC.................................................22114.0014.00----1.00-1.00-1.00-1.00-2.00--1.003.00-----1.00---2.00-----------1.00-----------------------------
.............................................................................................................................................TAACAAATTTAAAAAAAACTAA.......................................................................................2219.009.00--1.00-2.00-1.00-------------2.00-------1.00--------------------1.00---------1.00--------
.............................................................................................................................................TAACAAATTTAAAAAAAACT.........................................................................................2018.008.00-----------1.00---1.00-------1.00----1.00-----1.00-1.00----------------1.00--------1.00-----
...................................................................................................................................................................................TTTTTTTTCAACTTGTTACAGA.................................................2218.005.00--3.001.00---1.00----1.00--------1.00-----------1.00----------------------------------
.................................................................................................................................................................AAAGTCTGAATTAATTAG.......................................................................1828.008.00-----5.500.50---0.50-------0.50---------------------------------------------0.50-0.50-
....................................................................................................................................................................................TTTTTTTCAACTTGTTACAGCAG...............................................2317.007.00--1.001.001.00-1.00----------1.00------------2.00-------------------------------------
...................................................................................................................................................................................TTTTTTTTCAACTTGTTACAG..................................................2115.005.00----2.00-1.00------------------1.00-------------------------1.00----------------
......................................................................................................................................................................................TTTTTCAACTTGTTACAGCAGA..............................................2215.001.00--1.00----2.00-------------------1.00-------------------1.00--------------------
....................................................................................................................................................................................TTTTTTTCAACTTGTTACAGC.................................................2114.004.00----1.00-------------------1.00-------1.00------------1.00----------------------
................................................................................................................................................................TAAAGTCTGAATTAATTAGT......................................................................2013.003.00---------------------------------------1.00----1.00------------1.00----------
...................................................................................................................................................................................TTTTTTTTCAACTTGTTAC....................................................1913.003.00------------------2.00--------------1.00----------------------------------
...................................................................................................................................................................................TTTTTTTTCAACTTGTTACAGCAG...............................................2412.002.00--1.00----------1.00------------------------------------------------------
.................................................................................................................ATGGGGTCGGCAGCTCTG.......................................................................................................................1812.002.00-------------------------------2.00------------------------------------
....................................................................................................................................................................................TTTTTTTCAACTTGTTACAGAA................................................222.000.00--1.00----------1.00------------------------------------------------------
......................................................................................................................................................................................TTTTTCAACTTGTTACAGAGA...............................................212.000.00-------------------2.00------------------------------------------------
.....................................................................................................................................................................................TTTTTTCAACTTGTTACAGCAG...............................................2212.002.00---1.00-----1.00----------------------------------------------------------
.................................................................................................................................................................AAAGTCTGAATTAATTAC.......................................................................181.000.00-----1.00--------------------------------------------------------------
.............................................AGGCACTGGCTGGGACATG..........................................................................................................................................................................................191.000.00-----------------------------------1.00--------------------------------
.................................................................................................................................................................................................................................GTGTAGACTGCAGCCCGGTG.....2011.001.00----------------------------------------------------------1.00---------
..........................................................................................................................................CTGTAACAAATTTAAAAAAAACTAA.......................................................................................2511.001.00---------------------1.00----------------------------------------------
....................................................................................................................................................................................TTTTTTTCAACTTGTTACAGCAT...............................................231.000.00-----------------1.00--------------------------------------------------
....................................................................................................................................................................................TTTTTTTCAACTTGTTACAGCCG...............................................2311.004.00-----------------1.00--------------------------------------------------
...........................................................................................................................................................................................................................GGTTCGGTGTAGACTGCAGCCCGGT......2511.001.00---------1.00----------------------------------------------------------
.....................................................................................................................................................................................TTTTTTCAACTTGTTACAGCAGT..............................................2311.002.00-------1.00------------------------------------------------------------
...........................................................................................................................................TGTAACAAATTTAAAAAAAACTA........................................................................................2311.001.00----------1.00---------------------------------------------------------
..............................................................................................GTCTGTGTGCTGTTTCTGCATGGG....................................................................................................................................2411.001.00--------------1.00-----------------------------------------------------
...........................................................................................................................................TGTAACAAATTTAAAAAAAAC..........................................................................................2111.001.00-----------------------------------------1.00--------------------------
...................................................................................................................................................................................TTTTTTTTCAACTTGTTACA...................................................2011.001.00-----------------------1.00--------------------------------------------
.........................................................................................................................................GCTGTAACAAATTTAAAAAAA............................................................................................2111.001.00-------------------------------------1.00------------------------------
...................................................................................................................................................................................TTTTTTTTCAACTTGTTACAGTA................................................2311.005.00--------1.00-----------------------------------------------------------
.....................................................................................................................................................................................TTTTTTCAACTTGTTACAGCAGA..............................................2311.002.00---1.00----------------------------------------------------------------
....................................................................................................................................................................................TTTTTTTCAACTTGTTACAGAC................................................221.000.00-------------------------------------------1.00------------------------
..........................................................................................................................................................................................................................TGGTTCGGTGTAGACTGCAGCC..........2211.001.00------------------------------------------1.00-------------------------
......................................................................................................................................................................................TTTTTCAACTTGTTACAGCA................................................2011.001.00---------------1.00----------------------------------------------------
.............................................................................................................CTGCATGGGGTCGGCAGCTCTGCTCAGC.................................................................................................................2811.001.00-1.00------------------------------------------------------------------
.............................................................................................................................................TAACAAATTTAAAAAAAACTA........................................................................................2111.001.00--------------------------------1.00-----------------------------------
........................................................................................................................................CGCTGTAACAAATTTAAAAAAA............................................................................................2211.001.00------1.00-------------------------------------------------------------
..................................................................................................................................................................................................................................TGTAGACTGCAGCCCGGTGAAGGCA251.000.00---1.00----------------------------------------------------------------
.....................................................................................................................................................................................TTTTTTCAACTTGTTACAGCA................................................2111.001.00---------------------------------------------------------------1.00----
......................................................................................................................................................................................TTTTTCAACTTGTTACAGCAG...............................................2111.001.00--1.00-----------------------------------------------------------------
....................................................................................................................................................................................TTTTTTTCAACTTGTTACAGCAGT..............................................2411.007.00---1.00----------------------------------------------------------------
...........................................................................................................................................TGTAACAAATTTAAAAAAAATT.........................................................................................2220.500.50-----------------------------------0.50--------------------------------
.................................................ACTGGCTGGGACAGAGGG.......................................................................................................................................................................................1820.500.50-----------------------------------------------------------------0.50--
...........................................................................................................................................TGTAACAAATTTAAAAAAAAAT.........................................................................................2220.500.50------------------------------------0.50-------------------------------
...........................................................................................................................................TGTAACAAATTTAAAAAAAAAA.........................................................................................2220.500.50--------0.50-----------------------------------------------------------
...........................................................................................................................................TGTAACAAATTTAAAAAAAA...........................................................................................2020.500.50---------0.50----------------------------------------------------------
...................................................TGGCTGGGACAGAGGGT......................................................................................................................................................................................1740.250.25-------------------------------------------------------------------0.25

Antisense strand
GCAGTTACTGGCTTACCTGTAATATTTCTGACGCCTTCACTGGTCAGGCACTGGCTGGGACAGAGGGTGTCTGCACCGATTGAAGCCCTTGGTGGTCTGTGTGCTGTTTCTGCATGGGGTCGGCAGCTCTGCTCAGCGCTGTAACAAATTTAAAAAAAACTAAAGTCTGAATTAATTAGTTTTTTTTCAACTTGTTACAGCAGCGAATGGAGCTGCCGTGGTTCGGTGTAGACTGCAGCCCGGTGAAGGC
.......................................................................................................................................((((((((((((.((.((((((((((((............)))))))))))).)).)))))))))).))..............................................
......................................................................................................................................135.....................................................................207.........................................
SizePerfect hitTotal NormPerfect NormSRR394083(GSM855969)
background strain: C57BL6/SV129cell type: KRa. (cell line)		SRR037936(GSM510474)
293cand1. (cell line)		SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)		SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR206942(GSM723283)
other. (brain)		SRR206940(GSM723281)
other. (brain)		SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)		SRR306532(GSM750575)
19-24nt. (ago2 brain)		SRR038741(GSM527276)
small RNA-Seq. (brain)		SRR306542(GSM750585)
19-24nt. (ago2 brain)		SRR402761(SRX117944)
source: ES E14 male cells. (ESC)		SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR037921(GSM510459)
e12p5_rep3. (embryo)		GSM416732(GSM416732)
MEF. (cell line)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR039185(GSM485325)
shLuc.1309;ROSA-rtTA (-dox). (fibroblast)		SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR553582(SRX182788)
source: Brain. (Brain)		SRR346413(SRX098254)
Global profiling of miRNA and the hairpin pre. (Heart)		SRR306533(GSM750576)
19-24nt. (ago2 brain)		SRR038743(GSM527278)
small RNA-Seq. (dicer brain)		SRR039610(GSM527274)
small RNA-Seq. (brain)		SRR029123(GSM416611)
NIH3T3. (cell line)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		SRR306536(GSM750579)
19-24nt. (ago2 brain)		SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR037906(GSM510442)
brain_rep3. (brain)		GSM510444(GSM510444)
brain_rep5. (brain)		SRR306540(GSM750583)
19-24nt. (ago2 brain)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		SRR206941(GSM723282)
other. (brain)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR037905(GSM510441)
brain_rep2. (brain)		GSM510454(GSM510454)
newborn_rep10. (total RNA)		SRR037925(GSM510463)
e9p5_rep3. (embryo)		SRR306539(GSM750582)
19-24nt. (ago2 brain)		SRR346415(SRX098256)
source: Testis. (Testes)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR095855BC2(SRX039178)
sequencing of miRNA from wild type and diseas. (heart)		SRR306538(GSM750581)
19-24nt. (ago2 brain)		SRR306541(GSM750584)
19-24nt. (ago2 brain)		GSM261957(GSM261957)
oocytesmallRNA-19to24. (oocyte)		SRR306534(GSM750577)
19-24nt. (ago2 brain)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		SRR037924(GSM510462)
e9p5_rep2. (embryo)		SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)		SRR029038(GSM433290)
25dpp_hetero_tdrd6-KO. (tdrd6 testes)		SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)		SRR306544(GSM750587)
19-24nt. (ago2 brain)		SRR059769(GSM562831)
Treg_Drosha. (spleen)		SRR306537(GSM750580)
19-24nt. (ago2 brain)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
....................................................................................................................................TCAGCGCTGTAACAAATTTAAA................................................................................................ 2214.004.00-3.00--1.00---------------------------------------------------------------
...................................................................................................................................CTCAGCGCTGTAACAAATTTAT................................................................................................. 222.000.00-2.00------------------------------------------------------------------
...............................................................................................................................................................................TTAGTTTTTTTTCAACTTGTTA..................................................... 2212.002.00-2.00------------------------------------------------------------------
.....................................................................................................................................................................................................CAGCAGCGAATGGAGCTGGTT................................ 211.000.00--------------------------------------------------------1.00-----------
.....................................................................................................................................CAGCGCTGTAACAAATTTAAAA............................................................................................... 2211.001.00-1.00------------------------------------------------------------------
.................TGTAATATTTCTGACGCCTTCACTGG............................................................................................................................................................................................................... 2611.001.00-1.00------------------------------------------------------------------
........................................................................................................................................CGCTGTAACAAATTTAAAAAAA............................................................................................ 2211.001.00------------------------1.00-------------------------------------------
.....................................................................................................................................................................................................CAGCAGCGAATGGAGCTGCGT................................ 211.000.00-----1.00--------------------------------------------------------------
.....................................................................................................................................CAGCGCTGTAACAAATTTAAAAAT............................................................................................. 241.000.00-1.00------------------------------------------------------------------
...............................................................................................................................................................................................................TGGAGCTGCCGTGGTCCA......................... 181.000.00------------------------------------------------1.00-------------------
.......................................................................................................................TCGGCAGCTCTGCTCAGCGCTGTA........................................................................................................... 2411.001.00-1.00------------------------------------------------------------------