| (1) AGO.mut | (3) B-CELL | (5) BRAIN | (1) EMBRYO | (1) ESC | (2) FIBROBLAST | (8) LIVER | (1) LUNG | (5) OTHER | (3) OTHER.mut | (3) SPLEEN | (8) TESTES | (1) UTERUS |
| AGGATGCCTGTTTACTGTTCACACTCTCAGGAACTGAGGATAATTAATGCATTAGGGAGAGCAAAGTCACATTGTGTAGGCATGGATGGGAAGAGGACTTCCCTGTAATTAGAGGACTCTCTGTGTAGAGGAGCCAAGCAGCACAGTGGACTGAAGGAGTCACAGAGTACAGGAACTCTATGTTTCTCTTTCATTCTCAGGATGATACATGAGCTCCGCCTGCCCAAGTTCTCCATCTCCACCGACTACA ..................................................................................................................................................((((.((((((((.((.(((((......))))).))...)))))))).)).))................................................... .............................................................................................................................................142.......................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | mjLiverWT2() Liver Data. (liver) | mjLiverWT1() Liver Data. (liver) | mjLiverKO1() Liver Data. (Zcchc11 liver) | SRR042458(GSM539850) mouse basophil cells [09-002]. (b cell) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT4() Testes Data. (testes) | SRR059770(GSM562832) Treg_Dicer. (spleen) | SRR059769(GSM562831) Treg_Drosha. (spleen) | SRR345197(SRX097258) source: size fractionated RNA from mouse hipp. (brain) | mjTestesWT2() Testes Data. (testes) | SRR346414(SRX098255) Global profiling of miRNA and the hairpin pre. (Spleen) | SRR553602(SRX182808) source: Sertoli cells. (Sertoli cells) | SRR346421(SRX098263) Global profiling of miRNA and the hairpin pre. (mixture) | mjLiverKO3() Liver Data. (Zcchc11 liver) | GSM640578(GSM640578) small RNA in the liver with paternal control. (liver) | SRR279907(GSM689057) cell type: mouse embryonic stem cellcell line. (ESC) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR042454(GSM539846) mouse germinal center B cells (lymph node) [09-002]. (b cell) | SRR039183(GSM485323) shLuc.1309 (-dox). (fibroblast) | SRR346419(SRX098260) Global profiling of miRNA and the hairpin pre. (Lung) | SRR039184(GSM485324) shLuc.1309 (+dox). (fibroblast) | SRR346420(SRX098261) Global profiling of miRNA and the hairpin pre. (Uterus) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR553604(SRX182810) source: Spermatocytes. (Spermatocytes) | SRR077866(GSM637803) 18-30 nt small RNAs. (liver) | SRR042450(GSM539842) mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell) | SRR042456(GSM539848) mouse hematopoetic progenitor cells [09-002]. (bone marrow) | SRR345199(SRX097260) source: size fractionated RNA from mouse hipp. (brain) | SRR037903(GSM510439) testes_rep4. (testes) | SRR040488(GSM533911) E18.5 wild type LIVER small RNA. (liver) | SRR345201(SRX097262) source: size fractionated RNA from mouse hipp. (brain) | SRR037920(GSM510458) e12p5_rep2. (embryo) | SRR040489(GSM533912) E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver) | SRR345196(SRX097257) source: size fractionated RNA from mouse hipp. (brain) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR553603(SRX182809) source: Spermatids. (Spermatids) | SRR345198(SRX097259) source: size fractionated RNA from mouse hipp. (brain) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ..................................................................................................................................................TGGACTGAAGGAGTCACAGAGT.................................................................................. | 22 | 1 | 37.00 | 37.00 | 15.00 | - | 8.00 | 1.00 | - | 4.00 | - | - | - | - | - | 2.00 | - | 2.00 | - | - | 1.00 | 1.00 | - | 1.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................TGGACTGAAGGAGTCACAGAG................................................................................... | 21 | 1 | 11.00 | 11.00 | - | 4.00 | - | 1.00 | 2.00 | - | - | 2.00 | - | - | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TCTATGTTTCTCTTTCATTCTCAGT................................................. | 25 | 8.00 | 0.00 | - | 8.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................TGGACTGAAGGAGTCACAGAGA.................................................................................. | 22 | 1 | 5.00 | 11.00 | - | - | - | - | 1.00 | - | 1.00 | - | - | 2.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TCTATGTTTCTCTTTCATTCTCAT.................................................. | 24 | 2.00 | 0.00 | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................AGGAACTGAGGATAAGCG............................................................................................................................................................................................................ | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ............................................................................................................................GTAGAGGAGCCAAGCAGCACAGTGGACTGAAGGAGTCACAGAGTACAGGAACTCTATGTTTCTCTTTCATTCTCAG.................................................. | 76 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................................................................................................................TGGACTGAAGGAGTCACAGAGC.................................................................................. | 22 | 1 | 1.00 | 11.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................ATGTTTCTCTTTCATTCTCAGC................................................. | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...........................................................................................................ATTAGAGGACTCTCTGTGTA........................................................................................................................... | 20 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ..................................................................................................................................................TGGACTGAAGGAGTCACAGAGTAGA............................................................................... | 25 | 1.00 | 0.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................AGTGGACTGAAGGAGTCACAGA.................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..........................................................................TGTAGGCATGGATGGGAAGAGG.......................................................................................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................................................TCTATGTTTCTCTTTCATTCTC.................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .................................................................................................................................................GTGGACTGAAGGAGTCACAGAG................................................................................... | 22 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .......................................................................TTGTGTAGGCATGGATGGGAAGAGGA......................................................................................................................................................... | 26 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................................................................................................................................CAGGATGATACATGAGCTCC................................. | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ................................................................................................................................................AGTGGACTGAAGGAGTCACAGAG................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...................................................................................................................................................................................ATGTTTCTCTTTCATTGTTC................................................... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................TGGACTGAAGGAGTCACAGAGG.................................................................................. | 22 | 1 | 1.00 | 11.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................................................................TGTAGAGGAGCCAAGCAGCACAGTGGACTGAAGGAGTCACAGAGTACAGGAACTCTATGTTTCTCTTTCATTCTCAG.................................................. | 77 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................TGGGAAGAGGACTTCTGCT................................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ..................................................................................................................................................TGGACTGAAGGAGTCACAGA.................................................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................TTAATGCATTAGGGAATT............................................................................................................................................................................................. | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | |
| ................................................................................................................................................................................................................................CAAGTTCTCCATCTCCACC....... | 19 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - |
| .....................................................................................................................................................................................................................................TCTCCATCTCCACCGACTA.. | 19 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 | - | - | - | - |
| ............................................................................TAGGCATGGATGGGA............................................................................................................................................................... | 15 | 5 | 0.20 | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.20 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| AGGATGCCTGTTTACTGTTCACACTCTCAGGAACTGAGGATAATTAATGCATTAGGGAGAGCAAAGTCACATTGTGTAGGCATGGATGGGAAGAGGACTTCCCTGTAATTAGAGGACTCTCTGTGTAGAGGAGCCAAGCAGCACAGTGGACTGAAGGAGTCACAGAGTACAGGAACTCTATGTTTCTCTTTCATTCTCAGGATGATACATGAGCTCCGCCTGCCCAAGTTCTCCATCTCCACCGACTACA ..................................................................................................................................................((((.((((((((.((.(((((......))))).))...)))))))).)).))................................................... .............................................................................................................................................142.......................................................200................................................ | Size | Perfect hit | Total Norm | Perfect Norm | mjLiverWT2() Liver Data. (liver) | mjLiverWT1() Liver Data. (liver) | mjLiverKO1() Liver Data. (Zcchc11 liver) | SRR042458(GSM539850) mouse basophil cells [09-002]. (b cell) | SRR248527(GSM733815) cell type: spermatogonial stem cell enriched . (testes) | mjTestesWT4() Testes Data. (testes) | SRR059770(GSM562832) Treg_Dicer. (spleen) | SRR059769(GSM562831) Treg_Drosha. (spleen) | SRR345197(SRX097258) source: size fractionated RNA from mouse hipp. (brain) | mjTestesWT2() Testes Data. (testes) | SRR346414(SRX098255) Global profiling of miRNA and the hairpin pre. (Spleen) | SRR553602(SRX182808) source: Sertoli cells. (Sertoli cells) | SRR346421(SRX098263) Global profiling of miRNA and the hairpin pre. (mixture) | mjLiverKO3() Liver Data. (Zcchc11 liver) | GSM640578(GSM640578) small RNA in the liver with paternal control. (liver) | SRR279907(GSM689057) cell type: mouse embryonic stem cellcell line. (ESC) | SRR248524(GSM733812) cell type: Thy1+ spermatogonial stem cellstra. (testes) | SRR248526(GSM733814) cell type: Thy1- spermatogonial stem cellstra. (testes) | SRR042454(GSM539846) mouse germinal center B cells (lymph node) [09-002]. (b cell) | SRR039183(GSM485323) shLuc.1309 (-dox). (fibroblast) | SRR346419(SRX098260) Global profiling of miRNA and the hairpin pre. (Lung) | SRR039184(GSM485324) shLuc.1309 (+dox). (fibroblast) | SRR346420(SRX098261) Global profiling of miRNA and the hairpin pre. (Uterus) | SRR029039(GSM433291) 25dpp_homo_tdrd6-KO. (tdrd6 testes) | SRR553604(SRX182810) source: Spermatocytes. (Spermatocytes) | SRR077866(GSM637803) 18-30 nt small RNAs. (liver) | SRR042450(GSM539842) mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell) | SRR042456(GSM539848) mouse hematopoetic progenitor cells [09-002]. (bone marrow) | SRR345199(SRX097260) source: size fractionated RNA from mouse hipp. (brain) | SRR037903(GSM510439) testes_rep4. (testes) | SRR040488(GSM533911) E18.5 wild type LIVER small RNA. (liver) | SRR345201(SRX097262) source: size fractionated RNA from mouse hipp. (brain) | SRR037920(GSM510458) e12p5_rep2. (embryo) | SRR040489(GSM533912) E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver) | SRR345196(SRX097257) source: size fractionated RNA from mouse hipp. (brain) | SRR069809(GSM610965) small RNA sequencing; sample 1. (testes) | SRR553603(SRX182809) source: Spermatids. (Spermatids) | SRR345198(SRX097259) source: size fractionated RNA from mouse hipp. (brain) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ...........................................................................................................................................................................................................................CTGCCCAAGTTCTCCAATGG........... | 20 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................................................................................AGCTCCGCCTGCCCATGG..................... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................................................................................................................................................................................CCATCTCCACCGACTCAG | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ..................................................................................................................................................................................................................................AGTTCTCCATCTCCACCT...... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .....................................................................................................................................................................................................................................TCTCCATCTCCACCGACTC.. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................................................................................................TTCTCCATCTCCACCATT.... | 18 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................................................................................................................................................................CAAGTTCTCCATCTCCA......... | 17 | 7 | 0.57 | 0.57 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.43 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 | - | - |
| .................................................................................................................................................................................................................................AAGTTCTCCATCTCCAC........ | 17 | 7 | 0.29 | 0.29 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.14 | - |
| .......................................................................................................................................................................................................................................TCCATCTCCACCGACT... | 16 | 4 | 0.25 | 0.25 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.25 | - | - | - |
| .........................................................................................................................................................................................................................................CATCTCCACCGACT... | 14 | 8 | 0.12 | 0.12 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.12 |