| (1) AGO.mut | (7) BRAIN | (1) CELL-LINE | (2) ESC | (2) KIDNEY | (15) LIVER | (2) OTHER | (2) OTHER.mut | (3) TOTAL-RNA |
| GTGGCCAAGCTGCGTGCCCATCAGATGCACTATGCTGACTATAAGTTCCGGTGGGTAAGGGCGAGGGCCTGGGCCCAGACTGGAGAGGGGCAGGGTTGGGGGTCAGTGCCTTTGTGGGGGAAAGCCCAGAAGACCCGGAAGGTAAGGGTCCTCAAGCTCTGCCCCTGCAGGCTGGCCAGGTCCACGCTGACCCTCATCCCTCTGCTGGGGGTCCACGAGG ................................................................................................................((..((((..(((...((.(((((.........))))).))..)))...))))..))................................................... ..........................................................................................................107............................................................170................................................ | Size | Perfect hit | Total Norm | Perfect Norm | mjLiverWT1() Liver Data. (liver) | mjLiverWT3() Liver Data. (liver) | mjLiverKO3() Liver Data. (Zcchc11 liver) | SRR346418(SRX098259) Global profiling of miRNA and the hairpin pre. (Liver) | mjLiverKO1() Liver Data. (Zcchc11 liver) | SRR077864(GSM637801) 18-30 nt small RNAs. (liver) | SRR346416(SRX098257) Global profiling of miRNA and the hairpin pre. (Kidney) | SRR040489(GSM533912) E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver) | SRR345207(SRX097268) source: size fractionated RNA from mouse hipp. (brain) | SRR065047(SRR065047) Tissue-specific Regulation of Mouse MicroRNA . (liver) | GSM640580(GSM640580) small RNA in the liver with paternal Low pro. (liver) | SRR553585(SRX182791) source: Kidney. (Kidney) | GSM640581(GSM640581) small RNA in the liver with paternal control. (liver) | GSM640578(GSM640578) small RNA in the liver with paternal control. (liver) | SRR402762(SRX117945) source: ES E14 male cells. (ESC) | SRR065048(SRR065048) Tissue-specific Regulation of Mouse MicroRNA . (liver) | SRR345200(SRX097261) source: size fractionated RNA from mouse hipp. (brain) | SRR039152(GSM471929) HL1_siNon_smallRNAseq. (muscle) | SRR065046(SRR065046) Tissue-specific Regulation of Mouse MicroRNA . (liver) | SRR402760(SRX117943) source: ES E14 male cells. (ESC) | SRR037906(GSM510442) brain_rep3. (brain) | SRR553583(SRX182789) source: Cerebellum. (Cerebellum) | GSM640579(GSM640579) small RNA in the liver with paternal Low pro. (liver) | GSM510456(GSM510456) newborn_rep12. (total RNA) | SRR077866(GSM637803) 18-30 nt small RNAs. (liver) | SRR037914(GSM510451) newborn_rep7. (total RNA) | GSM510453(GSM510453) newborn_rep9. (total RNA) | SRR345205(SRX097266) source: size fractionated RNA from mouse hipp. (brain) | SRR346417(SRX098258) Global profiling of miRNA and the hairpin pre. (Brain) | SRR345198(SRX097259) source: size fractionated RNA from mouse hipp. (brain) | SRR345201(SRX097262) source: size fractionated RNA from mouse hipp. (brain) | GSM416732(GSM416732) MEF. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAG.................................................. | 22 | 1 | 42.00 | 42.00 | 19.00 | 13.00 | - | 5.00 | - | - | 1.00 | - | - | 1.00 | - | 2.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAGT................................................. | 23 | 1 | 39.00 | 42.00 | 12.00 | 10.00 | 6.00 | 2.00 | 1.00 | 2.00 | 1.00 | 1.00 | - | - | - | - | 1.00 | - | - | - | - | - | - | - | 1.00 | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - |
| ....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAGA................................................. | 23 | 1 | 16.00 | 42.00 | 5.00 | 8.00 | - | 2.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAGTA................................................ | 24 | 1 | 5.00 | 42.00 | - | 3.00 | - | - | - | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...............................................................................................................TTGTGGGGGAAAGCCCAGAAGACC..................................................................................... | 24 | 1 | 5.00 | 5.00 | - | - | - | - | 5.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAGAA................................................ | 24 | 1 | 4.00 | 42.00 | 4.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................CTCAAGCTCTGCCCCTGCAGTT................................................ | 22 | 3.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAGAT................................................ | 24 | 1 | 3.00 | 42.00 | - | - | - | - | 3.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................CTCAAGCTCTGCCCCTGCAGTA................................................ | 22 | 2.00 | 0.00 | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAT.................................................. | 22 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ...................................................................................................................................................GTCCTCAAGCTCTGCCCCTGCA................................................... | 22 | 1 | 2.00 | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAAT................................................. | 23 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | 1.00 | - | - | - | - | - | |
| ....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAGTAT............................................... | 25 | 1 | 2.00 | 42.00 | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .....................................................................................AGGGGCAGGGTTGGGGGCG.................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | |
| ...............................................................................................................TTGTGGGGGAAAGCCCAGAAGACCC.................................................................................... | 25 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ...........................................................................CAGACTGGAGAGGGGGCCC.............................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | |
| ....................................GACTATAAGTTCCGGC........................................................................................................................................................................ | 16 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ......................................................................................................................................................CTCAAGCTCTGCCCCTGCAGT................................................. | 21 | 1.00 | 0.00 | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAGC................................................. | 23 | 1 | 1.00 | 42.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................TCCTCAAGCTCTGCCCCGGCT................................................... | 21 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ................................................................................TGGAGAGGGGCAGGGGGGA......................................................................................................................... | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAAAA................................................ | 24 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ........................................................................GCCCAGACTGGAGAGACGT................................................................................................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAGTTT............................................... | 25 | 1 | 1.00 | 42.00 | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCCGC................................................. | 23 | 1 | 1.00 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..................................................GTGGGTAAGGGCGAGGGCCTGGGCCCA............................................................................................................................................... | 27 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ..............................................................................................................TTTGTGGGGGAAAGCCCAGAAGA....................................................................................... | 23 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| ......................................................................................................................................................CTCAAGCTCTGCCCCTGCAGGT................................................ | 22 | 1.00 | 0.00 | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| ....................................................................................................................................................TCCTCAAGCTCTGCCCCTGCAGTT................................................ | 24 | 1 | 1.00 | 42.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - |
| ....................................................................................................................................................TCCTCAAGCTCTGCCCCTGC.................................................... | 20 | 1 | 1.00 | 1.00 | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |
| .........................................................................CCCAGACTGGAGAGGGG.................................................................................................................................. | 17 | 3 | 0.33 | 0.33 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 0.33 |
| GTGGCCAAGCTGCGTGCCCATCAGATGCACTATGCTGACTATAAGTTCCGGTGGGTAAGGGCGAGGGCCTGGGCCCAGACTGGAGAGGGGCAGGGTTGGGGGTCAGTGCCTTTGTGGGGGAAAGCCCAGAAGACCCGGAAGGTAAGGGTCCTCAAGCTCTGCCCCTGCAGGCTGGCCAGGTCCACGCTGACCCTCATCCCTCTGCTGGGGGTCCACGAGG ................................................................................................................((..((((..(((...((.(((((.........))))).))..)))...))))..))................................................... ..........................................................................................................107............................................................170................................................ | Size | Perfect hit | Total Norm | Perfect Norm | mjLiverWT1() Liver Data. (liver) | mjLiverWT3() Liver Data. (liver) | mjLiverKO3() Liver Data. (Zcchc11 liver) | SRR346418(SRX098259) Global profiling of miRNA and the hairpin pre. (Liver) | mjLiverKO1() Liver Data. (Zcchc11 liver) | SRR077864(GSM637801) 18-30 nt small RNAs. (liver) | SRR346416(SRX098257) Global profiling of miRNA and the hairpin pre. (Kidney) | SRR040489(GSM533912) E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver) | SRR345207(SRX097268) source: size fractionated RNA from mouse hipp. (brain) | SRR065047(SRR065047) Tissue-specific Regulation of Mouse MicroRNA . (liver) | GSM640580(GSM640580) small RNA in the liver with paternal Low pro. (liver) | SRR553585(SRX182791) source: Kidney. (Kidney) | GSM640581(GSM640581) small RNA in the liver with paternal control. (liver) | GSM640578(GSM640578) small RNA in the liver with paternal control. (liver) | SRR402762(SRX117945) source: ES E14 male cells. (ESC) | SRR065048(SRR065048) Tissue-specific Regulation of Mouse MicroRNA . (liver) | SRR345200(SRX097261) source: size fractionated RNA from mouse hipp. (brain) | SRR039152(GSM471929) HL1_siNon_smallRNAseq. (muscle) | SRR065046(SRR065046) Tissue-specific Regulation of Mouse MicroRNA . (liver) | SRR402760(SRX117943) source: ES E14 male cells. (ESC) | SRR037906(GSM510442) brain_rep3. (brain) | SRR553583(SRX182789) source: Cerebellum. (Cerebellum) | GSM640579(GSM640579) small RNA in the liver with paternal Low pro. (liver) | GSM510456(GSM510456) newborn_rep12. (total RNA) | SRR077866(GSM637803) 18-30 nt small RNAs. (liver) | SRR037914(GSM510451) newborn_rep7. (total RNA) | GSM510453(GSM510453) newborn_rep9. (total RNA) | SRR345205(SRX097266) source: size fractionated RNA from mouse hipp. (brain) | SRR346417(SRX098258) Global profiling of miRNA and the hairpin pre. (Brain) | SRR345198(SRX097259) source: size fractionated RNA from mouse hipp. (brain) | SRR345201(SRX097262) source: size fractionated RNA from mouse hipp. (brain) | GSM416732(GSM416732) MEF. (cell line) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ........................................................................................................................................................CAAGCTCTGCCCCTGGTG.................................................. | 18 | 2.00 | 0.00 | - | - | - | - | - | - | - | - | 2.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | |
| .......................................................................................................................................................TCAAGCTCTGCCCCTCATC.................................................. | 19 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | |
| .......................................................................................................................................................................CAGGCTGGCCAGGTCCACGGCA............................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | |
| ..................................................................................................................................................................................GGTCCACGCTGACC............................ | 14 | 2 | 1.00 | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - |
| ..GGCCAAGCTGCGTGCCCACACT.................................................................................................................................................................................................... | 22 | 1.00 | 0.00 | - | - | - | - | - | - | - | - | 1.00 | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - | - |