ID: uc007gdg.11
GENE: Tcfe2a(11)
chr10:79881511-79881760-


(2)
AGO1.ip
(2)
AGO2.ip
(1)
AGO3.ip
(12)
B-CELL
(13)
BRAIN
(3)
CELL-LINE
(1)
DCR.mut
(1)
DGCR8.mut
(8)
EMBRYO
(7)
ESC
(3)
LIVER
(2)
LUNG
(3)
LYMPH
(13)
OTHER
(2)
OTHER.mut
(1)
PANCREAS
(3)
PIWI.ip
(4)
SKIN
(3)
SPLEEN
(1)
TDRD1.ip
(24)
TESTES
(1)
THYMUS

Sense strand
CTTGGAACTCACAGAGATTGCCTGCCTCTGTCTCCTCTATGCTGGCAGAGCACAGGTTTTTAGTGGCTGCATTAACAAGGCCCCTCAAGTGTCAGGGATGTGGCATCCTTGGAACCTGACTACAGCATGGTAGGGGGCCACATGAGGGCATGTGGAGATGGCAGTGGCCAGACCTTCCTCTCTGCTCTTGCTCCCAGCAGATACTCAGCCGAAGAAGGTCCGGAAGGTTCCGCCTGGTCTCCCTTCCTCG
........................................................................................................................................((....((.(((((.(((((((((((....))))........)))))))...))))).))))....................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
mjTestesWT1()
Testes Data. (testes)
mjTestesWT3()
Testes Data. (testes)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjTestesWT2()
Testes Data. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)
SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
SRR073954(GSM629280)
total RNA. (blood)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR553586(SRX182792)
source: Testis. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR073955(GSM629281)
total RNA. (blood)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR037902(GSM510438)
testes_rep3. (testes)
SRR206940(GSM723281)
other. (brain)
SRR206941(GSM723282)
other. (brain)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR037900(GSM510436)
testes_rep1. (testes)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
mjTestesWT4()
Testes Data. (testes)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)
SRR363960(GSM822762)
Adult Library#1Small RNA Miwi IPDuplexed run:. (testes)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)
SRR037901(GSM510437)
testes_rep2. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
.............................................................................................................................................ATGAGGGCATGTGGAGATGGCA.......................................................................................22136.0036.004.003.002.004.00-2.00---1.001.001.001.003.00---1.00-1.00--2.00-1.00-------1.00---1.00--1.00--------1.001.00-1.00-----------------------1.00--1.00-----------------1.00
.............................................................................................................................................ATGAGGGCATGTGGAGATGGCAA......................................................................................23119.0036.001.00-2.00-1.00--3.00---1.00--------2.001.00----2.00--1.00-----1.00-----------1.00-----1.00------1.00----1.00-------------------------------
............................................................................................................................................CATGAGGGCATGTGGAGATGGCAT......................................................................................24117.001.001.003.001.00-1.007.00--1.00-------------------------------------------1.00------1.00---------------------1.00---------------
.............................................................................................................................................ATGAGGGCATGTGGAGATGGCAAA.....................................................................................24111.0036.00------7.00----1.00---------2.00------------------------1.00--------------------------------------------------
.............................................................................................................................................ATGAGGGCATGTGGAGATGGCAT......................................................................................23111.0036.002.002.00---------1.00--2.00---------------------1.001.00--------------------1.00-----------1.00--------------------------
.............................................................................................................................................ATGAGGGCATGTGGAGATGGCAG......................................................................................2319.009.00--1.00-1.00--1.00------------1.00-----------------------------------------------1.00--------1.00-1.00----1.00-----1.00------
.............................................................................................................................................ATGAGGGCATGTGGAGATGG.........................................................................................2019.009.001.00--------2.00------------------2.00---1.00-2.00-----------------------------------------------1.00--------------
.............................................................................................................................................ATGAGGGCATGTGGAGATGGC........................................................................................2116.006.00-1.00--------2.00------1.00-1.00-----------------------------------------1.00-----------------------------------
..............................................................................................................................................TGAGGGCATGTGGAGATGGCA.......................................................................................2116.006.00---1.001.00---1.00-------------1.00------------1.00---------1.00---------------------------------------------------
...........................................................................................................................................ACATGAGGGCATGTGGAGATGGCAT......................................................................................2515.003.003.00-1.00--------------1.00-------------------------------------------------------------------------------
.............................................................................................................................................ATGAGGGCATGTGGAGATGGCAGA.....................................................................................2415.009.00-1.00--------------4.00--------------------------------------------------------------------------------
...........................................................................................................................................ACATGAGGGCATGTGGAGATGG.........................................................................................2215.005.00-1.00----------2.00-------------------1.00------------------------------------------------------------1.00---
..............................................................................................................................................TGAGGGCATGTGGAGATGGCAG......................................................................................2215.005.00-1.001.001.001.00-----1.00--------------------------------------------------------------------------------------
.......................................................................................................................................GGCCACATGAGGGCATGTGGAGATGG.........................................................................................2614.004.00------------------4.00------------------------------------------------------------------------------
............................................................................................................................................CATGAGGGCATGTGGAGATGGCAA......................................................................................2414.001.00---------------3.00-----------------1.00---------------------------------------------------------------
............................................................................................................................................CATGAGGGCATGTGGAGATGG.........................................................................................2114.004.00--------1.00------------------------------------------1.00-----------------------------------1.00-1.00-------
..........................................................................................................................................................................................................ACTCAGCCGAAGAAGGTCCGGAA.........................2313.003.00--1.00---------1.00------------1.00-----------------------------------------------------------------------
...............................................................................................................................................................................TCCTCTCTGCTCTTGCTCCCAGT....................................................233.000.00--------3.00----------------------------------------------------------------------------------------
...........................................................................................................................................ACATGAGGGCATGTGGAGATGGCA.......................................................................................2413.003.001.001.00-----------------1.00-----------------------------------------------------------------------------
...........................................................................................................................................ACATGAGGGCATGTGGAGATGGC........................................................................................2313.003.00---2.00------------------------------------------------1.00--------------------------------------------
.............................................................................................................................................ATGAGGGCATGTGGAGATGGCAAT.....................................................................................2413.0036.00-----------1.00------------------------------------1.00--------1.00---------------------------------------
.............................................................................................................................................ATGAGGGCATGTGGAGATGGCAAAA....................................................................................2512.0036.00---2.00---------------------------------------------------------------------------------------------
...........................................................................................................................................ACATGAGGGCATGTGGAGATGGTA.......................................................................................2412.005.00-------------------------2.00-----------------------------------------------------------------------
..............................................................................................................................................TGAGGGCATGTGGAGATGGCAAAT....................................................................................2412.006.00-----------------------------2.00-------------------------------------------------------------------
.............................................................................................................................................ATGAGGGCATGTGGAGATGGCATT.....................................................................................2412.0036.00------------------------------------1.00-----1.00------------------------------------------------------
.................................................................................................................................................................................CTCTCTGCTCTTGCTCCCAGT....................................................212.000.00----2.00--------------------------------------------------------------------------------------------
..............................................................................................................................................TGAGGGCATGTGGAGATGGCAA......................................................................................2212.006.00------------------------1.00--------1.00---------------------------------------------------------------
............................................................................................................................................CATGAGGGCATGTGGAGATGGCATT.....................................................................................2512.001.00-----------------1.00-1.00-----------------------------------------------------------------------------
.....................................................................................................................................................................................................CAGATACTCAGCCGAAGAAGGTCCGGA..........................2712.002.00-------------------------------2.00-----------------------------------------------------------------
............................................................................................................................................CATGAGGGCATGTGGAGATGGC........................................................................................2212.002.001.00-----------1.00------------------------------------------------------------------------------------
..............................................................................................................................................TGAGGGCATGTGGAGATGGCAGTGG...................................................................................2512.002.00-------2.00-----------------------------------------------------------------------------------------
...............................................................................................................................................GAGGGCATGTGGAGACTG.........................................................................................181.000.00---------------------------------------------------------------1.00---------------------------------
....................................................................................................................................................................................................................AGAAGGTCCGGAAGGTT.....................1711.001.00-----------------------------------------------------------------------------------------------1.00-
................................TCCTCTATGCTGGCAGAGC.......................................................................................................................................................................................................1911.001.00--------------------------------------------1.00----------------------------------------------------
..........................................................................................................................................CACATGAGGGCATGTGGAGTTGG.........................................................................................231.000.00--------------------------1.00----------------------------------------------------------------------
.............................................................................................................................................ATGAGGGCATGTGGAGATGGCATAG....................................................................................2511.0036.00-----------------------1.00-------------------------------------------------------------------------
............AGAGATTGCCTGCCTCTGCCTA........................................................................................................................................................................................................................221.000.00----1.00--------------------------------------------------------------------------------------------
..................................................................................................................................TAGGGGGCCACATGACGG......................................................................................................181.000.00----------------------------------1.00--------------------------------------------------------------
.............................................................................................................................................ATGAGGGCATGTGGAGATGACAG......................................................................................2311.001.00--------------1.00----------------------------------------------------------------------------------
...........................................................................................................................................................................................................CTCAGCCGAAGAAGGTCCGGAAGGT......................2511.001.00---------1.00---------------------------------------------------------------------------------------
.TTGGAACTCACAGAGATTGCCTG..................................................................................................................................................................................................................................2311.001.00-----------------------1.00-------------------------------------------------------------------------
....................................................................................................................................................................................................GCAGATACTCAGCCGAAGAAGGA...............................231.000.00-------------------------------------------------------------------------------------------1.00-----
............................................................................................................................................CATGAGGGCATGTGGAGATGGCATA.....................................................................................2511.001.00-----------------------------------------------1.00-------------------------------------------------
.............................................................................................................................................ATGAGGGCATGTGGAGATGGCATTT....................................................................................2511.0036.00---------------------1.00---------------------------------------------------------------------------
.............................................................................................................................................................................................................CAGCCGAAGAAGGTCCGG...........................1811.001.00----------------------------------------1.00--------------------------------------------------------
.............................................................................................................................................ATGAGGGCATGTGGAGATGGCC.......................................................................................2211.006.00-------------------------------------------------1.00-----------------------------------------------
.................................................................................................................................................................................CTCTCTGCTCTTGCTCCCAGA....................................................211.000.00-------------------------------------------------------------------------------------1.00-----------
.............................................................................................................................................ATGAGGGCATGTGGAGATGGCATGA....................................................................................2511.0036.00-------------1.00-----------------------------------------------------------------------------------
...............................................................................................................................................................................TCCTCTCTGCTCTTGCTCCCAGC....................................................2311.001.00---------1.00---------------------------------------------------------------------------------------
....................................................................................................................................................................................................................AGAAGGTCCGGAAGGTTCCGCCTG..............2411.001.00--------------------------------------------1.00----------------------------------------------------
.............................................................................................................................................ATGAGGGCATGTGGAGATGGCAGT.....................................................................................2411.001.00-------------------------------------------------------1.00-----------------------------------------
..............................................................................................................................................TGAGGGCATGTGGAGATGGCAATA....................................................................................2411.006.00-1.00-----------------------------------------------------------------------------------------------
..............................................................................................................................................TGAGGGCATGTGGAGATGGAA.......................................................................................211.000.00------------------------------------------------------------------1.00------------------------------
............................................................................................................................................CATGAGGGCATGTGGAGATGGCA.......................................................................................2311.001.001.00------------------------------------------------------------------------------------------------
.............................................................................................................................................ATGAGGGCATGTGGAGATGGCATAA....................................................................................2511.0036.00---------------------------------1.00---------------------------------------------------------------
..............................................................................................................................................................................................................AGCCGAAGAAGGTCCGGAAGGTTCCGCC................2811.001.00------------------------------------------------------1.00------------------------------------------
...........................................................................................................................................ACATGAGGGCATGTGGAGATGGCAA......................................................................................2511.003.00--1.00----------------------------------------------------------------------------------------------
...........................................................................................................................................ACATGAGGGCATGTGGTGG............................................................................................191.000.00----------1.00--------------------------------------------------------------------------------------
.............................................................................................................................................ATGAGGGCATGTGGAGATGGCATTTT...................................................................................2611.0036.00---------------------------------------1.00---------------------------------------------------------
................................................................................................................................................................................CCTCTCTGCTCTTGCTCCCAGCAT..................................................241.000.00-------------------------------------------------------------------------1.00-----------------------
.............................................................................................................................................ATGAGGGCATGTGGAGATGGTA.......................................................................................2211.009.00---------------------------------------------1.00---------------------------------------------------
..............................................................................................................................................TGAGGGCATGTGGAGATGGCAGT.....................................................................................2311.001.00------------------------1.00------------------------------------------------------------------------
.......................................................................................................................................................................................................GATACTCAGCCGAAGAAGGTCC.............................2211.001.00---------------------------------------------------------------------1.00---------------------------
..........................................................................................................................................CACATGAGGGCATGTGGAGATGGCAG......................................................................................2611.001.00--------------1.00----------------------------------------------------------------------------------
.............................................................................................................................................ATGAGGGCATGTGGAGATG..........................................................................................1911.001.00-----------------------------------1.00-------------------------------------------------------------
..............................................................................................................................................TGAGGGCATGTGGAGATGGCAT......................................................................................2211.006.00----1.00--------------------------------------------------------------------------------------------
...................................................................................................................................................................................................................AAGAAGGTCCGGAAGGTTC....................1911.001.00--------------------------------------------------1.00----------------------------------------------
..................................................................................................................................................................................................................GAAGAAGGTCCGGAAGGTTCCGC.................2311.001.00----------------------------------------1.00--------------------------------------------------------
...................................................................................................................................................................................................................AAGAAGGTCCGGAAGGTTCCGCC................2311.001.00--------------------------------------1.00----------------------------------------------------------
................................................................................................................................................................................CCTCTCTGCTCTTGCTCCCAGCAAA.................................................251.000.00---------------------------1.00---------------------------------------------------------------------
.............................................................................................................................................ATGAGGGCATGTGGAGATGTCAA......................................................................................2311.001.00--------------------------------------------------------------------------1.00----------------------
............................................GCAGAGCACAGGTTTCGAT...........................................................................................................................................................................................191.000.00----------------------------1.00--------------------------------------------------------------------
.................................................................................................................................................................................................................CGAAGAAGGTCCGGAAGGTTCCGCCT...............2611.001.00--1.00----------------------------------------------------------------------------------------------
.............................................................................................................................................ATGAGGGCATGTGGAGATGGCATAAT...................................................................................2611.0036.00----------------------------------------------1.00--------------------------------------------------
.....................................................................................................GGCATCCTTGGAACCTGACTACAGC............................................................................................................................2511.001.001.00------------------------------------------------------------------------------------------------
............................................................................................................................................CATGAGGGCATGTGGAGATGGT........................................................................................2211.004.00-1.00-----------------------------------------------------------------------------------------------
...................................................................................................GTGGCATCCTTGGAACCTGACTAC...............................................................................................................................2411.001.00---------------1.00---------------------------------------------------------------------------------
.............................................................................................................................................ATGAGGGCATGTGGAGATGGCAAGT....................................................................................2511.0036.00--------------------------------------------------------------------------------------------1.00----
.............................................................................................................................................ATGAGGGCATGTGGAGATGGATAT.....................................................................................2411.009.00------------------------------------------1.00------------------------------------------------------
......................................................................................................................................................................................................................AAGGTCCGGAAGGTTCCGCCT...............2111.001.00---------------------------1.00---------------------------------------------------------------------
.............................................................................................................................................ATGAGGGCATGTGGAGATGGCAAAT....................................................................................2511.0036.00-------------------------------------1.00-----------------------------------------------------------
................................................................................................................................................................................CCTCTCTGCTCTTGCTCCCAGCAGT.................................................251.000.001.00------------------------------------------------------------------------------------------------
...............................................................................................................................................GAGGGCATGTGGAGAATGC........................................................................................191.000.00-------------------------------------------1.00-----------------------------------------------------
............................................................................................................................................CATGAGGGCATGTGGAGATGGAAT......................................................................................2411.004.00----------------------------------------------------------------1.00--------------------------------
..............................................................................................................................................TGAGGGCATGTGGAGATGGCAGTAT...................................................................................2511.001.00----1.00--------------------------------------------------------------------------------------------
.............................................................................................................................................ATGAGGGCATGTGGAGATGGCTA......................................................................................2311.006.00----------------------------------------------------------------------------------------------1.00--
............................................................................................................................................CATGAGGGCATGTGGAGCTGG.........................................................................................211.000.00---------------------------1.00---------------------------------------------------------------------
......................................................................................................GCATCCTTGGAACCTGACTACAGCATGG........................................................................................................................2811.001.00--------------------------------------------------1.00----------------------------------------------
..............................................................................................................................................TGAGGGCATGTGGAGATGGCAGTGGCC.................................................................................2711.001.00--------------------1.00----------------------------------------------------------------------------
..................................................................................................................................................................................................................GAAGAAGGTCCGGAAG........................1620.500.50---------0.50---------------------------------------------------------------------------------------
......................................................................................................................................................................................TGCTCTTGCTCCCAGC....................................................1660.170.17-----------------------------------------------------0.17-------------------------------------------

Antisense strand
CTTGGAACTCACAGAGATTGCCTGCCTCTGTCTCCTCTATGCTGGCAGAGCACAGGTTTTTAGTGGCTGCATTAACAAGGCCCCTCAAGTGTCAGGGATGTGGCATCCTTGGAACCTGACTACAGCATGGTAGGGGGCCACATGAGGGCATGTGGAGATGGCAGTGGCCAGACCTTCCTCTCTGCTCTTGCTCCCAGCAGATACTCAGCCGAAGAAGGTCCGGAAGGTTCCGCCTGGTCTCCCTTCCTCG
........................................................................................................................................((....((.(((((.(((((((((((....))))........)))))))...))))).))))....................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
mjTestesWT1()
Testes Data. (testes)
mjTestesWT3()
Testes Data. (testes)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
mjTestesWT2()
Testes Data. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR394084(GSM855970)
background strain: C57BL6/SV129cell type: KRa. (dicer cell line)
SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
SRR073954(GSM629280)
total RNA. (blood)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR553586(SRX182792)
source: Testis. (testes)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR028730(GSM400967)
Tdrd1-associated. (tdrd1 testes)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR073955(GSM629281)
total RNA. (blood)
SRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR116846(GSM678422)
Small RNA deep sequencing from mouse epididym. (epididymis)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR346419(SRX098260)
Global profiling of miRNA and the hairpin pre. (Lung)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR014231(GSM319955)
16.5 dpc total. (testes)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR363956(GSM822758)
P14-WTSmall RNA Miwi IPread_length: 36. (testes)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR037902(GSM510438)
testes_rep3. (testes)
SRR206940(GSM723281)
other. (brain)
SRR206941(GSM723282)
other. (brain)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR037900(GSM510436)
testes_rep1. (testes)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR363959(GSM822761)
AdultSmall RNA Miwi IPread_length: 36. (testes)
mjTestesWT4()
Testes Data. (testes)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
GSM640581(GSM640581)
small RNA in the liver with paternal control. (liver)
SRR363960(GSM822762)
Adult Library#1Small RNA Miwi IPDuplexed run:. (testes)
SRR014232(GSM319956)
16.5 dpc MILI. (mili testes)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR028731(GSM400968)
Mili-wt-associated. (testes)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)
GSM475280(GSM475280)
Mili-IP. (mili testes)
SRR042478(GSM539870)
mouse lung tissue [09-002]. (lung)
SRR037901(GSM510437)
testes_rep2. (testes)
GSM509280(GSM509280)
small RNA cloning by length. (testes)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
SRR042453(GSM539845)
mouse marginal zone B cells (spleen) [09-002]. (b cell)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
..........................................................................................................CCTTGGAACCTGACTACAGCATGGTA...................................................................................................................... 2614.004.00-----------------------1.00-----------------1.00-----------------------------------------1.00--1.00----------
...............................................................................................................................................................................TCCTCTCTGCTCTTGCTCCCAGCAGAT................................................ 273.000.00-------------------------------------------------------------------1.00---1.00----------------1.00--------
......................................................................................................GCATCCTTGGAACCTGACTACAGCATGGTA...................................................................................................................... 3012.002.00--------------------------------------------------------1.00-----------------------1.00----------------
.....................................................................................................GGCATCCTTGGAACCTGACTACAGCATGGTA...................................................................................................................... 3112.002.00------------------------------2.00------------------------------------------------------------------
.............................................................................................................................................................................CTTCCTCTCTGCTCTTGCTCCCAGCAGA................................................. 2811.001.00------------------------------1.00------------------------------------------------------------------
........................................................................................................ATCCTTGGAACCTGACTACAGCATGGTA...................................................................................................................... 2811.001.00-------------------------------1.00-----------------------------------------------------------------
................................................................................................................AACCTGACTACAGCATTT........................................................................................................................ 181.000.00------------------------------------------------------------------------1.00------------------------
..........................................................................................................CCTTGGAACCTGACTACAGCATGGTAT..................................................................................................................... 271.000.00----------------------------------------------------------------------------1.00--------------------
.......................................................................................................CATCCTTGGAACCTGACTACAGCA........................................................................................................................... 2411.001.00-----------------------------------------1.00-------------------------------------------------------
................................TCCTCTATGCTGGCAGAGCACAGGTTTTTAT........................................................................................................................................................................................... 311.000.00--------------------------------------------------------------1.00----------------------------------
...............................................GAGCACAGGTTTTTAATA......................................................................................................................................................................................... 181.000.00--------------------------------------1.00----------------------------------------------------------
............................TGTCTCCTCTATGCTCC............................................................................................................................................................................................................. 171.000.00-------------------------------------------1.00-----------------------------------------------------