ID: mmu-mir-7088
GENE: Mst1(3)
chr9:107983779-107983964+


(1)
AGO.mut 		(2)
AGO1.ip 		(2)
AGO2.ip 		(1)
AGO3.ip 		(1)
BRAIN 		(1)
CELL-LINE 		(1)
EMBRYO 		(2)
ESC 		(1)
KIDNEY 		(7)
LIVER 		(4)
OTHER 		(4)
OTHER.mut 		(2)
PIWI.ip 		(4)
SKIN 		(5)
TESTES 		(5)
TOTAL-RNA

Sense strand
GCACACACAGCTATACCACTCGAGTCTGTGCCATCTCTTCCAGAAGAAAGGCAAGTGGTGGTGAGGAGGGGAAACAGGCTGAGTAACAGGGGCCACGAGGCCTCAGGCCCTGTTGACCTTCCTCCATTGCTTCCAGATTATGTGCGGACCTGCATTATGGACAATGGGGTCAGCTACCGGGGCACT
....................................................(((..((((..(((((((..((((((((........((((((....)))))).)))).))))..)))))))))))..)))......................................................
..................................................51...................................................................................136................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		mjLiverWT3()
Liver Data. (liver)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR037937(GSM510475)
293cand2. (cell line)		GSM640583(GSM640583)
small RNA in the liver with paternal Low prot. (liver)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		SRR073955(GSM629281)
total RNA. (blood)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
................................................................................................................TTGACCTTCCTCCATTGCTTCC....................................................22177.0077.0048.0017.003.001.00-4.00-2.001.00------------------1.00---
................................................................................................................TTGACCTTCCTCCATTGCTTCCA...................................................23121.0021.008.003.009.00----1.00-----------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCCAT..................................................24116.0021.006.002.004.00--------------1.00-1.00------1.00-1.00--
................................................................................................................TTGACCTTCCTCCATTGCTTC.....................................................21115.0015.009.006.00-----------------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCA....................................................22112.0015.002.001.003.00---5.00-------------1.00----------
................................................................................................................TTGACCTTCCTCCATTGCTTCCT...................................................2319.0077.006.003.00-----------------------------
..................................................GCAAGTGGTGGTGAGGAGGGGAAAC...............................................................................................................2518.008.003.002.003.00----------------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCT....................................................2217.0015.004.002.001.00----------------------------
................................................................................................................TTGACCTTCCTCCATTGCTT......................................................2016.006.003.002.00---1.00-------------------------
..................................................GCAAGTGGTGGTGAGGAGGGGAAT................................................................................................................2414.002.00-1.002.00-1.00--------------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCCAGT.................................................254.000.00-2.001.00-------------------1.00--------
..................................................GCAAGTGGTGGTGAGGAGGGGA..................................................................................................................2214.004.00--2.00-----2.00----------------------
................................................................................................................TTGACCTTCCTCCATTGCT.......................................................1913.003.001.001.00-------1.00---------------------
...................................................CAAGTGGTGGTGAGGAGGGGAAT................................................................................................................233.000.00----3.00--------------------------
...........................................................................................................................................................TATGGACAATGGGGTATT.............183.000.00---3.00---------------------------
................................................................................................................TTGACCTTCCTCCATTGCTTA.....................................................2113.006.00-2.001.00----------------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCCAA..................................................2412.0021.00---------1.00-----1.00---------------
.................ACTCGAGTCTGTGCCATCTCTTCCAGAAGA...........................................................................................................................................3012.002.00-------------2.00-----------------
................................................................................................................TTGACCTTCCTCCATTGCTTAA....................................................2212.006.00--2.00----------------------------
..................................................GCAAGTGGTGGTGAGGAGGGGAA.................................................................................................................2312.002.002.00------------------------------
..................................................GCAAGTGGTGGTGAGGAGGGGAAATTT.............................................................................................................272.000.00-2.00-----------------------------
................................................................................................................TTGACCTTCCTCCATTGC........................................................1811.001.00---1.00---------------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCCAGTATT..............................................281.000.001.00------------------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCAAT..................................................2411.0015.00-1.00-----------------------------
..................................................GCAAGTGGTGGTGAGGAG......................................................................................................................1811.001.00--1.00----------------------------
..................................................................AGGGGAAACAGGCTGTC.......................................................................................................171.000.00-----------------------------1.00-
................................................................................................................TTGACCTTCCTCCATTGCTTCCTT..................................................2411.0077.00--1.00----------------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCCG...................................................2311.0077.00-1.00-----------------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCCTTA.................................................2511.0077.001.00------------------------------
........................................................................................................................................................CATTATGGACAATGGGG.................1711.001.00----1.00--------------------------
..................................................................................................................GACCTTCCTCCATTGCTTCCAGA.................................................2311.001.00---1.00---------------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCCATAAT...............................................2711.0021.001.00------------------------------
................CACTCGAGTCTGTGCCATCTCTTCCA................................................................................................................................................2611.001.00----------1.00--------------------
..................................................GCAAGTGGTGGTGAGGAGGGGAAACT..............................................................................................................2611.008.00-1.00-----------------------------
...................................................................................................................................................................ATGGGGTCAGCTACCGG......1711.001.00----------------1.00--------------
..........................................................................................GGCCACGAGGCCTCATGGA.............................................................................191.000.00-----------------------1.00-------
....................................................................GGGAAACAGGCTGAGTAAC...................................................................................................1911.001.00---1.00---------------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCCC...................................................2311.0077.001.00------------------------------
..................................................GCAAGTGGTGGTGAGGAGGGTAAT................................................................................................................241.000.00----1.00--------------------------
.............................................................................................................................................GTGCGGACCTGCATTATGGACAATGGGG.................2811.001.00----------1.00--------------------
..................................................GCAAGTGGTGGTGAGGAGGGAAA.................................................................................................................231.000.00----1.00--------------------------
..........................................................................................................................................................TTATGGACAATGGGGTCAGCTACCGG......2611.001.00---------------------1.00---------
................................................................................................................TTGACCTTCCTCCATTGCTTCCACC.................................................2511.0021.001.00------------------------------
................................................................................................................TTGACCTTCCTCCATTGCTTCCAGTTT...............................................271.000.001.00------------------------------
..................................................GCAAGTGGTGGTGAGGAGGGGAT.................................................................................................................2311.004.001.00------------------------------
...CACACAGCTATACCACTCG....................................................................................................................................................................1911.001.00--1.00----------------------------
......................................................GTGGTGGTGAGGAGGG....................................................................................................................1670.140.14------------------------------0.14

Antisense strand
GCACACACAGCTATACCACTCGAGTCTGTGCCATCTCTTCCAGAAGAAAGGCAAGTGGTGGTGAGGAGGGGAAACAGGCTGAGTAACAGGGGCCACGAGGCCTCAGGCCCTGTTGACCTTCCTCCATTGCTTCCAGATTATGTGCGGACCTGCATTATGGACAATGGGGTCAGCTACCGGGGCACT
....................................................(((..((((..(((((((..((((((((........((((((....)))))).)))).))))..)))))))))))..)))......................................................
..................................................51...................................................................................136................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)		SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)		SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)		GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)		SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)		mjLiverKO3()
Liver Data. (Zcchc11 liver)		mjLiverKO1()
Liver Data. (Zcchc11 liver)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR402766(SRX117949)
source: ES PGK female cells. (ESC)		GSM510456(GSM510456)
newborn_rep12. (total RNA)		SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)		mjLiverWT3()
Liver Data. (liver)		SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		GSM510453(GSM510453)
newborn_rep9. (total RNA)		SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)		SRR037914(GSM510451)
newborn_rep7. (total RNA)		SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)		SRR037912(GSM510449)
newborn_rep5. (total RNA)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		mjTestesKO7()
Testes Data. (Zcchc11 testes)		Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)		SRR037937(GSM510475)
293cand2. (cell line)		GSM640583(GSM640583)
small RNA in the liver with paternal Low prot. (liver)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		GSM510450(GSM510450)
newborn_rep6. (total RNA)		SRR073955(GSM629281)
total RNA. (blood)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR346416(SRX098257)
Global profiling of miRNA and the hairpin pre. (Kidney)
..........................TGTGCCATCTCTTCCAGAACTCG......................................................................................................................................... 232.000.00------------2.00------------------
..................................................................................................................GACCTTCCTCCATTGCTTCCAGAT................................................ 2412.002.00--------------2.00----------------
............................................................................................................CCTGTTGACCTTCCTCATGC.......................................................... 201.000.00------------------1.00------------
.................ACTCGAGTCTGTGCCATCTCTTCCAGAA............................................................................................................................................. 2811.001.00-----------1.00-------------------
.................................................................................................................................................................CAATGGGGTCAGCTAAT........ 171.000.00------------------------1.00------
.....................GAGTCTGTGCCATCTCTTCCAGAAGAAA......................................................................................................................................... 2811.001.00-----------1.00-------------------
................CACTCGAGTCTGTGCCATCTCTTCCAT............................................................................................................................................... 2711.000.00-------------------------1.00-----