ID: mmu-mir-7081
GENE: Dnmt1(10)
chr9:20718484-20718733-


(2)
AGO1.ip
(6)
AGO2.ip
(2)
AGO3.ip
(9)
B-CELL
(11)
BRAIN
(5)
CELL-LINE
(2)
DGCR8.mut
(9)
EMBRYO
(5)
ESC
(2)
FIBROBLAST
(2)
LIVER
(5)
LYMPH
(14)
OTHER
(6)
OTHER.mut
(1)
PANCREAS
(1)
PIWI.ip
(2)
PIWI.mut
(7)
SKIN
(8)
SPLEEN
(18)
TESTES
(3)
THYMUS
(2)
TOTAL-RNA

Sense strand
AGGTCGGCTTGGGCAGCAGAGCAAGACACTCTCAACAAATAAAAGGCCTTGAAGCTGTGGTGTGAGGTGTACAAGACTAATAAGATTCCTGTTCTCAGACTCGGCTCTCAGTTGCTGGTCCAGGCATTTCAGAGGAGGGTGCTCGGCCGGGGATTATAAATCTGTGGTAAAGTAGTATTCCCCTGGTATCCTCCTCACAGGCCTGAGAATACCCACAGGTCCTACAACGGATCCTATCACACTGACATCA
...................................................................................................................................((((((((((((.....(((((.(((....((.......))..))).))))).))))))))))))......................................................
.............................................................................................................................126.......................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR553603(SRX182809)
source: Spermatids. (Spermatids)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
GSM475280(GSM475280)
Mili-IP. (mili testes)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR073955(GSM629281)
total RNA. (blood)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR073954(GSM629280)
total RNA. (blood)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (salivary gland)
SRR037905(GSM510441)
brain_rep2. (brain)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)
SRR059765(GSM562827)
DN3_control. (thymus)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
SRR037930(GSM510468)
e7p5_rep4. (embryo)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)
SRR553586(SRX182792)
source: Testis. (testes)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR037914(GSM510451)
newborn_rep7. (total RNA)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR037912(GSM510449)
newborn_rep5. (total RNA)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
mjTestesWT2()
Testes Data. (testes)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR059768(GSM562830)
Treg_control. (spleen)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR042482(GSM539874)
mouse skin tissue [09-002]. (skin)
SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCACA...................................................22142.0042.005.003.001.003.003.00----1.002.00--1.00-3.00--1.001.00-1.00---1.001.001.002.00------1.001.001.00---2.00-1.00-----1.00--------1.00-------1.00-----1.00-----------------1.00-------1.00--
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCAC....................................................21132.0032.003.004.002.001.003.00--2.00--1.00--2.00-------1.001.00--1.00----1.002.00-1.001.001.00---1.001.00----1.00---------------------------------1.00---------------1.00-----
..............................................................................................................................................................................................................................TACAACGGATCCTATCACACTGACATC.27118.0018.00------------6.00-3.00--3.00--2.00--------------------------------------------1.00----1.00--1.00-----------------------1.00---
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCACT...................................................22114.0032.001.002.002.001.00-----1.001.00----------------1.00-1.00-1.00----------1.00----1.00---------------------1.00-------------------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCA.....................................................20112.0012.00-2.001.001.00--------------------1.00----1.00---1.00------------------1.00---------------1.00---------1.00--1.00---1.00---------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCACAGT.................................................2418.002.001.001.00------2.00-------3.00---------------------------------1.00--------------------------------------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCAAT...................................................2216.0012.001.00-1.00----3.00---------------------------------------------------------------------------1.00-----------------
..................................................................................................................................................................................TCCCCTGGTATCCTCCTCACAGT.................................................2315.003.002.00---1.00----------------1.00---------------------1.00---------------------------------------------------------
..................................................................................................................................................................................................................ACCCACAGGTCCTACAACGGATCCT...............2515.005.00------4.00-----------1.00----------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCACAA..................................................2315.0042.00-2.00--------------------1.00--------------------------------1.00-------------------------------------------1.00-
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCAT....................................................2115.0012.00-------1.00-----------1.00----------1.00---------1.00-----------------------------------1.00------------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCACC...................................................2214.0032.00---2.00-------------------2.00-----------------------------------------------------------------------------
...............................................................................................................................................................................................................................ACAACGGATCCTATCACACTGACATC.2613.003.00--------1.00--1.00-----1.00-----------------------------------------------------------------------------------
........................................................................................................................................................................................................................AGGTCCTACAACGGATCCT...............1913.003.00-----2.001.00----------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCACAGA.................................................2413.002.00-----1.00-----1.00---------------1.00-------------------------------------------------------------------------
..........................................................................................................................................................TATAAATCTGTGGTAAAGTAGT..........................................................................2213.003.00----------------------------------------------------------------1.00---------1.00------------1.00-------------
.................................................................................................................................................................................................................TACCCACAGGTCCTACAACGGA...................2213.003.00------1.00-1.00-----------------------1.00--------------------------------------------------------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCAA....................................................2113.0012.00----1.00--------------1.00---------1.00-----------------------------------------------------------------------
..................................................................................................................................................................................TCCCCTGGTATCCTCCTCACAG..................................................2213.003.00---------------------------------------1.00--1.00--------------------1.00-------------------------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCATT...................................................2212.0012.00--1.00---------------------------------------------------------1.00----------------------------------------
..................................................................................................................................AGAGGAGGGTGCTCGGCCGGGGATTA..............................................................................................2612.002.00----------------1.00-------------------1.00----------------------------------------------------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCATTT..................................................2312.0012.00-------1.00--------------------------1.00------------------------------------------------------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTAAGT...................................................222.000.00----------2.00------------------------------------------------------------------------------------------
..................................................................................................................................................................................TCCCCTGGTATCCTCCTCACAGTA................................................2412.003.00----1.00----1.00-------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCACAG..................................................2312.002.00--1.00----------1.00---------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTC......................................................1912.002.00--1.00---------------------1.00----------------------------------------------------------------------------
..................................................................................................................................................................................TCCCCTGGTATCCTCCTCACT...................................................2112.001.001.00--------1.00-------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCGCAC....................................................212.000.00---1.00----------------------------------------------------------1.00--------------------------------------
................................................................................................................................................................................ATTCCCCTGGTATCCTCCTCACA...................................................2312.002.00------------------------1.00------------------------------------------------------------------1.00---------
..................................................................................................................................AGAGGAGGGTGCTCGGCCGGGGATT...............................................................................................2512.002.00----------------------1.00---------------------------------------------------------1.00--------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCACG...................................................2212.0032.001.00--1.00-------------------------------------------------------------------------------------------------
.......................................................................................................................................................................................................................CAGGTCCTACAACGGATCCT...............2012.002.00-----2.00-----------------------------------------------------------------------------------------------
................................................................................................................................................................................ATTCCCCTGGTATCCTCCTCACT...................................................2312.001.00-------------------------------------1.00-----------------------1.00---------------------------------------
...............................................................................................................................................................................................................................ACAACGGATCCTATCACACT.......2012.002.00-----2.00-----------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................ACAACGGATCCTATCACACTGAC....2312.002.00-----------1.00--1.00--------------------------------------------------------------------------------------
.................AGAGCAAGACACTCTTAA.......................................................................................................................................................................................................................181.000.00----------------------------------------------1.00------------------------------------------------------
...................................................................................................................................................................................................................CCCACAGGTCCTACAACGGA...................2011.001.00--------------------1.00--------------------------------------------------------------------------------
...........................................................................................................................................................................................................TGAGAATACCCACAGGTCCTACAACGGA...................2811.001.00------------------------------------------------------------------------------------1.00----------------
...................................................................................................................................................................................................................................CGGATCCTATCACACTGAC....1911.001.00--------------------------------------------------------------------------------------1.00--------------
................................................................................................................................TCAGAGGAGGGTGCTCGGCCGGGGAT................................................................................................2611.001.00---------------------------------------------------------1.00-------------------------------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCACAAAT................................................2511.0042.00------------------------------------------------------1.00----------------------------------------------
..................................................................................................................................................................................TCCCCTGGTATCCTCCTCAAT...................................................211.000.001.00----------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCAATA..................................................2311.0012.00------------------1.00----------------------------------------------------------------------------------
.................................................................................................................................CAGAGGAGGGTGCTCGGCCGGGGATT...............................................................................................2611.001.00------------------------------1.00----------------------------------------------------------------------
.............................................................................................................................................................................................................................CTACAACGGATCCTATCAC..........1911.001.00-----------1.00-----------------------------------------------------------------------------------------
.................................................................................................................................................................................................................................AACGGATCCTATCACACTGAC....2111.001.00--------------------------------------1.00--------------------------------------------------------------
..................................................................................................................................................................................TCCCCTGGTATCCTCCTCACTAA.................................................2311.001.00---------------------------------------------------1.00-------------------------------------------------
..................................................................................................................................................................................................................ACCCACAGGTCCTACAACGGATC.................2311.001.00------1.00----------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................ACGGATCCTATCACACTGACA...2111.001.00---------------1.00-------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCAAG...................................................2211.0012.00--1.00--------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................ACAGGCCTGAGAATACCCACAGGTCCT...........................2711.001.00--------------------------------------1.00--------------------------------------------------------------
..................................................................................................................................................................................TCCCCTGGTATCCTCCTCACAGTAT...............................................2511.003.00-------1.00---------------------------------------------------------------------------------------------
..................................................................................................................................................................................TCCCCTGGTATCCTCCTCACATTAT...............................................2511.001.00-----1.00-----------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCCC....................................................2111.002.00----------------------------1.00------------------------------------------------------------------------
............................................................................................................................................................................................................................CCTACAACGGATCCTATCACACT.......2311.001.00------------------------------------------------------------------------------------------------1.00----
..................................................................................................................................................................................................................ACCCACAGGTCCTACAACGGATCC................2411.001.00--------1.00--------------------------------------------------------------------------------------------
..........................................................................................................................................................................................................................................TATCACACTGACATCGCAC191.000.00--------------------------------------------------------------------------------------------1.00--------
................................................................................................................................TCAGAGGAGGGTGCTCGGCCGCCCG.................................................................................................251.000.00-----------------------------------------------------------------------------1.00-----------------------
..................................................................................................................................................................................................................................ACGGATCCTATCACACTGA.....1911.001.00------1.00----------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCAATT..................................................2311.0012.001.00----------------------------------------------------------------------------------------------------
................................................................................................................................TCAGAGGAGGGTGCTCGGCCGGG...................................................................................................2311.001.00-----------------------1.00-----------------------------------------------------------------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCT.....................................................2011.002.001.00----------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCACTAA.................................................2411.0032.00-------------1.00---------------------------------------------------------------------------------------
................................................................................................................................................................................ATTCCCCTGGTATCCTCCTT......................................................201.000.00-------------------------1.00---------------------------------------------------------------------------
..................................................................................................................................................................................................................ACCCACAGGTCCTACAACGGA...................2111.001.00-----------1.00-----------------------------------------------------------------------------------------
................................................................................................................................................................................ATTCCCCTGGTATCCTCCTCAC....................................................2211.001.00--------------------------------------------------1.00--------------------------------------------------
.........................................................................................................................................GGTGCTCGGCCGGGGATTATAAATCTGTGGTA.................................................................................3211.001.00----------------------------------------------------------------------------------1.00------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCAAAC..................................................2311.0012.00---------1.00-------------------------------------------------------------------------------------------
...............................................................................................................................................................................................................................ACAACGGATCCTATCACACTGACAT..2511.001.00-----------1.00-----------------------------------------------------------------------------------------
........................................................................................................................CAGGCATTTCAGAGGAGGGTG.............................................................................................................2111.001.00--------------------------------1.00--------------------------------------------------------------------
..GTCGGCTTGGGCAGCTT.......................................................................................................................................................................................................................................171.000.00---------------------------------------------1.00-------------------------------------------------------
..................................................................................................................................................................................TCCCCTGGTATCCTCCTCACAGAATT..............................................2611.003.00-----------------------------------------------1.00-----------------------------------------------------
..........................................................................................................................................................TATAAATCTGTGGTAAAGTAGTAT........................................................................2411.001.00--------1.00--------------------------------------------------------------------------------------------
..................................................................................................................................................................................TCCCCTGGTATCCTCCTCAC....................................................2011.001.00-----------------------------------------------------1.00-----------------------------------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCACAAA.................................................2411.0042.00--1.00--------------------------------------------------------------------------------------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCACAAT.................................................2411.0042.00--1.00--------------------------------------------------------------------------------------------------
.....................................................................TACAAGACTAATAAGGTT...................................................................................................................................................................181.000.00----------------------------------------------------------------------------------------1.00------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCACACA.................................................2411.0042.00--------------------------1.00--------------------------------------------------------------------------
...................................................AAGCTGTGGTGTGAGGGT.....................................................................................................................................................................................181.000.00----------------------------------------------1.00------------------------------------------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTCAG....................................................2111.0012.00---------1.00-------------------------------------------------------------------------------------------
..................................................................................................................................................................................TCCCCTGGTATCCTCCTCACA...................................................2111.001.001.00----------------------------------------------------------------------------------------------------
..................................................................................................................................................................................TCCCCTGGTATCCTCCTCACAA..................................................2211.001.00--------------------------------------------1.00--------------------------------------------------------
...................................................................................................................................................................................................................................CGGATCCTATCACACTGACATC.2211.001.00---------------------------------------------------------------------------------------------1.00-------
...............................................CTTGAAGCTGTGGTGTGAGGTG.....................................................................................................................................................................................2211.001.00-------------------------------------------------------------------1.00---------------------------------
.................................................TGAAGCTGTGGTGTGAGGGGTG...................................................................................................................................................................................221.000.00--------------------------------------------------------1.00--------------------------------------------
............................................................................................................................................................TAAATCTGTGGTAAAGTAGTA.........................................................................2111.001.00----------------------------------------------------------------------------------------------1.00------
.................................................................................................................................CAGAGGAGGGTGCTCGGCCGGGGATTT..............................................................................................2711.001.00---------------------------------------------------------------------------1.00-------------------------
.................................................................................................................................................................................TTCCCCTGGTATCCTCCTTT.....................................................201.000.00--------------------------------------------1.00--------------------------------------------------------
..........................................................................................................................................................TATAAATCTGTGGTAAAGTAG...........................................................................2111.001.00-------------------------------------------------1.00---------------------------------------------------
......................................................................................................................................................................................................AGGCCTGAGAATACCC....................................1640.500.50----------------------------------------------------------------------------------------------------0.50

Antisense strand
AGGTCGGCTTGGGCAGCAGAGCAAGACACTCTCAACAAATAAAAGGCCTTGAAGCTGTGGTGTGAGGTGTACAAGACTAATAAGATTCCTGTTCTCAGACTCGGCTCTCAGTTGCTGGTCCAGGCATTTCAGAGGAGGGTGCTCGGCCGGGGATTATAAATCTGTGGTAAAGTAGTATTCCCCTGGTATCCTCCTCACAGGCCTGAGAATACCCACAGGTCCTACAACGGATCCTATCACACTGACATCA
...................................................................................................................................((((((((((((.....(((((.(((....((.......))..))).))))).))))))))))))......................................................
.............................................................................................................................126.......................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
GSM314557(GSM314557)
ESC dgcr8 (Illumina). (ESC)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR553604(SRX182810)
source: Spermatocytes. (Spermatocytes)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR553603(SRX182809)
source: Spermatids. (Spermatids)
mjTestesKO6()
Testes Data. (Zcchc11 testes)
SRR390299(GSM849857)
cell line: NIH-3T3cell type: fibroblastip ant. (ago2 fibroblast)
SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR391850(GSM852145)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
GSM475280(GSM475280)
Mili-IP. (mili testes)
Ago2IP517(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR059766(GSM562828)
DN3_Drosha. (thymus)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR073955(GSM629281)
total RNA. (blood)
Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
SRR073954(GSM629280)
total RNA. (blood)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
Ago2IP504(Rui)
Quantitative functions of Argonaute proteins . (ago2 skin)
SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (salivary gland)
SRR037905(GSM510441)
brain_rep2. (brain)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR039610(GSM527274)
small RNA-Seq. (brain)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR023852(GSM307161)
ZHBT-c424hsmallrna_rep1. (cell line)
SRR059765(GSM562827)
DN3_control. (thymus)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
SRR040488(GSM533911)
E18.5 wild type LIVER small RNA. (liver)
SRR306542(GSM750585)
19-24nt. (ago2 brain)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR037944(GSM510482)
293DcrTN_cand5. (cell line)
SRR279903(GSM689053)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)
SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)
GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)
SRR042466(GSM539858)
mouse CD8+ T cells (spleen) [09-002]. (spleen)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR042462(GSM539854)
mouse macrophages [09-002]. (bone marrow)
SRR039154(GSM471931)
HL1_siSrf2_smallRNAseq. (muscle)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
SRR037930(GSM510468)
e7p5_rep4. (embryo)
mjTestesKO8()
Testes Data. (Zcchc11 testes)
SRR023850(GSM307159)
ZHBT-c40hsmallrna_rep1. (cell line)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR029040(GSM433292)
6w_hetero_tdrd6-KO. (tdrd6 testes)
GSM509277(GSM509277)
small RNA cloning by length. (piwi testes)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR346414(SRX098255)
Global profiling of miRNA and the hairpin pre. (Spleen)
SRR553586(SRX182792)
source: Testis. (testes)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR037914(GSM510451)
newborn_rep7. (total RNA)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR069834(GSM304914)
Analysis of small RNAs in murine neutrophils cultured in vitro by Solexa/Illumina genome analyzer. (blood)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR039184(GSM485324)
shLuc.1309 (+dox). (fibroblast)
mjTestesKO7()
Testes Data. (Zcchc11 testes)
SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)
SRR069810(GSM610966)
small RNA sequencing; sample 2. (testes)
SRR042483(GSM539875)
mouse muscle tissue [09-002]. (muscle)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR037912(GSM510449)
newborn_rep5. (total RNA)
SRR039153(GSM471930)
HL1_siSrf1_smallRNAseq. (muscle)
mjTestesWT2()
Testes Data. (testes)
SRR038745(GSM527280)
small RNA-Seq. (dgcr8 brain)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR059768(GSM562830)
Treg_control. (spleen)
SRR248524(GSM733812)
cell type: Thy1+ spermatogonial stem cellstra. (testes)
SRR248526(GSM733814)
cell type: Thy1- spermatogonial stem cellstra. (testes)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
SRR248527(GSM733815)
cell type: spermatogonial stem cell enriched . (testes)
SRR391845(GSM852140)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR042482(GSM539874)
mouse skin tissue [09-002]. (skin)
SRR402760(SRX117943)
source: ES E14 male cells. (ESC)
...................AGCAAGACACTCTCAAAGGA................................................................................................................................................................................................................... 202.000.00------------------------------------------------2.00----------------------------------------------------
.........................ACACTCTCAACAAATGTCC.............................................................................................................................................................................................................. 191.000.00--------1.00--------------------------------------------------------------------------------------------
..............AGCAGAGCAAGACACAGGC......................................................................................................................................................................................................................... 191.000.00-----------------------------------------------------------------------------------------1.00-----------
...................................................................................................................................................................................................................................CGGATCCTATCACACAA...... 171.000.00--------------------------1.00--------------------------------------------------------------------------
........................................................................................................................................GGGTGCTCGGCCGGGGAA................................................................................................ 181.000.00-----------------------------------------------------------------------1.00-----------------------------
................................................................................................................................................................................................................................CAACGGATCCTATCAGTT........ 181.000.00-----------------------------------------------------------1.00-----------------------------------------
................................................................................................................TGCTGGTCCAGGCATT.......................................................................................................................... 1640.250.25---------0.25-------------------------------------------------------------------------------------------