ID: mmu-mir-7078
GENE: 4933407C03Rik(19)
chr8:119983029-119983278+


(1)
AGO.mut
(13)
AGO2.ip
(13)
B-CELL
(34)
BRAIN
(4)
CELL-LINE
(2)
DCR.mut
(1)
DGCR8.mut
(8)
EMBRYO
(7)
ESC
(1)
FIBROBLAST
(1)
KIDNEY
(9)
LIVER
(5)
LYMPH
(19)
OTHER
(3)
OTHER.mut
(1)
PANCREAS
(2)
PIWI.ip
(2)
PIWI.mut
(6)
SPLEEN
(12)
TESTES
(3)
THYMUS
(2)
TOTAL-RNA
(2)
UTERUS

Sense strand
AGATGTGTCGTCCAATTTCAGAAGGCAATTAAAATTGTATCTACTCTGGGTGATGGATGTCTTTGAGGCCACCTGTGCCCTGGGTCACCAGCCCAACCCCTTCCAGAGCCCTGAGATCCCACAGCCTCATAGTGGACAGGGTGTGGGTGGTAGGAGACGCTGGCTGGTATTTGACCAGGTACTTTTTTTATCATCCACAGGCCAAGCTTCCTAACCTAAAGGAGGTTGATGTTCGCTACACGGAAGCCTG
.............................................................................................................................................((((((((((((((((...((.(((((.....))))).))..))))))))))))))))...................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
mjTestesWT4()
Testes Data. (testes)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (salivary gland)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR345206(SRX097267)
source: size fractionated RNA from mouse hipp. (brain)
SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR206940(GSM723281)
other. (brain)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)
SRR059767(GSM562829)
DN3_Dicer. (thymus)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR073955(GSM629281)
total RNA. (blood)
SRR306543(GSM750586)
19-24nt. (ago2 brain)
SRR073954(GSM629280)
total RNA. (blood)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)
SRR038740(GSM527275)
small RNA-Seq. (dicer brain)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR206941(GSM723282)
other. (brain)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR077866(GSM637803)
18-30 nt small RNAs. (liver)
SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)
SRR065047(SRR065047)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
GSM509276(GSM509276)
small RNA cloning by length. (testes)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR037903(GSM510439)
testes_rep4. (testes)
mjLiverWT3()
Liver Data. (liver)
SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)
SRR306539(GSM750582)
19-24nt. (ago2 brain)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)
SRR059765(GSM562827)
DN3_control. (thymus)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR037911(GSM510448)
newborn_rep4. (total RNA)
SRR206942(GSM723283)
other. (brain)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)
SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
SRR306538(GSM750581)
19-24nt. (ago2 brain)
mjLiverWT2()
Liver Data. (liver)
.............................................................................................................................................TGTGGGTGGTAGGAGACGCT.........................................................................................20159.0059.004.005.006.009.005.00-1.00--1.00--1.005.00-1.003.004.00-1.00--1.00-2.00---1.00-1.00-------1.00--1.00-----1.001.001.00------1.00------1.00---------------------1.00-----------------------------------------
...................................................................................................................................................................................TACTTTTTTTATCATCCACAGT.................................................22129.005.00--------3.00--4.00---------2.00-----1.00----1.002.00-------------1.00--1.00----1.00-1.002.00-------1.00-1.00-------1.00----1.00----------1.00----1.001.00-----1.001.00---1.00-----------------
............................................................................................................................................GTGTGGGTGGTAGGAGACGCTGG.......................................................................................23128.0028.00-----12.001.001.002.001.001.00---1.001.00--1.00----------------1.00-1.00-------------1.00--1.00------------------------1.00-------------1.00----------------------------1.00----
............................................................................................................................................GTGTGGGTGGTAGGAGACGCT.........................................................................................21127.0027.00-1.00--2.00--2.00-5.00--1.00-2.002.00--1.00-4.00-1.00-1.00----------1.00-1.00--------------1.00-----------------------------------------1.00------------1.00-------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTGG.......................................................................................22118.0018.001.00---1.00-1.001.00--1.00--------1.00--1.00---2.00--1.00------------1.00-1.00-----------1.00--------------------------------1.00----------1.00-------1.00---------1.00-----1.00--
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTG........................................................................................21118.0018.002.00------1.00--3.001.00------1.00--1.00-----1.001.00---1.00-----1.00--1.00-----------------2.001.00-------------------------------------------------1.00----------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTGT.......................................................................................22117.0018.002.00-----4.00-1.00-1.00--------1.00-----1.00--1.001.00---------1.00----------------------------------1.00-------1.00----1.00-----------1.00---------------------------
............................................................................................................................................GTGTGGGTGGTAGGAGACGCTG........................................................................................2218.008.00-------1.00------1.00--------1.00------------3.00------------------------------------------------------1.00-------------------------------1.00---
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTGA.......................................................................................2217.0018.00-1.00----------2.00----------------1.00---------1.001.00---------1.00----------------------------------------------------------------------------
............................................................................................................................................GTGTGGGTGGTAGGAGACGCTGT.......................................................................................2317.008.00--1.00----2.00-----------------2.001.00--------------------------------------1.00-------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGC..........................................................................................1916.006.00--------1.00----1.00----1.00-----------1.00-------------1.00--------1.00-------------------------------------------------------------------------
...................................................................................................................................................................................TACTTTTTTTATCATCCACAG..................................................2115.005.00---------------------1.00--------1.00-----------1.00-------------------------------------------1.00--------------------------------------1.00-
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTAT.......................................................................................2214.0059.003.00--------------1.00---------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................AAAGGAGGTTGATGTTCGCT.............2014.004.00-----------2.00-------------------------------------------1.00----------------------------------1.00------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTAA.......................................................................................2213.0059.00-2.00---------------------------------------------------------------------------1.00-------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTT........................................................................................2113.0059.00-1.00-1.00----1.00----------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTA........................................................................................2113.0059.002.00--------------------------1.00---------------------------------------------------------------------------------------------------
................................................................................................................................................................................AGGTACTTTTTTTATCATCCACAGT.................................................253.000.00---------------------------1.00-----------------1.00--1.00------------------------------------------------------------------------------
...........................................................................................................................................GGTGTGGGTGGTAGGAGACGCTGG.......................................................................................2413.003.00-------------------------------3.00-----------------------------------------------------------------------------------------------
...................................................................................................................................................................................TACTTTTTTTATCATCCACAGA.................................................2213.005.00-----------1.00-------------------------------2.00-----------------------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACG...........................................................................................1813.003.00----------------1.001.00----------------------------------------------1.00--------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGA..........................................................................................1913.003.00-1.001.00--------------------------------------------------------------------------------------------------------------1.00-------------
......................................................................................................................................................................................................................................GTTCGCTACACGGAAGCCT.1912.002.00------------------------------------------------------------------------------1.00-----------------------------------1.00------------
............................................................................................................................................GTGTGGGTGGTAGGAGACGCTT........................................................................................2212.0027.001.00------------------------1.00-----------------------------------------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCCT........................................................................................2112.006.00---1.00--------1.00------------------------------------------------------------------------------------------------------------------
............................................................................................................................................GTGTGGGTGGTAGGAGACGCTGA.......................................................................................2312.008.00------1.00-------------------------------------------------------------------------1.00----------------------------------------------
..................................................................................................................................................................................................................................TGATGTTCGCTACACGGA......1812.002.00--------------------------------------------------------------2.00----------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCA.........................................................................................2012.006.00-------------1.00---------------------------------------------------------1.00-------------------------------------------------------
....................................................................................................................................................................................................................AACCTAAAGGAGGTTGAT....................1812.002.00-------------------------------------------------------------2.00-----------------------------------------------------------------
...................................................................................................................................................................................TACTTTTTTTATCATCCACAGC.................................................2212.005.00--------------1.00----------------------------------------------------------1.00-----------------------------------------------------
............................................................................................................................................GTGTGGGTGGTAGGAGACG...........................................................................................1912.002.00----1.00------------------1.00-------------------------------------------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTGAA......................................................................................2312.0018.00----------1.00-----------------1.00--------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................TAAAGGAGGTTGATGTTCGCTACACGG.......2712.002.00----------------------------------1.00------------------------------------------------------------1.00-------------------------------
............................................................................................................................................GTGTGGGTGGTAGGAGACGCTGAAA.....................................................................................2512.008.00--1.00---------------1.00------------------------------------------------------------------------------------------------------------
............................................................................................................................................GTGTGGGTGGTAGGAGACGCTGTT......................................................................................2411.008.00-------1.00-----------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGATAA.......................................................................................2211.003.00-------------------1.00-----------------------------------------------------------------------------------------------------------
..............................................................................................................................................GTGGGTGGTAGGAGACGCTGA.......................................................................................211.000.00-------------------------------------------------------------------1.00-----------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACTCT.........................................................................................201.000.00---1.00---------------------------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................CTAACCTAAAGGAGGTTGATGTTCG...............2511.001.00---------------------------------------------------------------------------------------------------------------------1.00---------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTGGGA.....................................................................................2411.0018.00------1.00------------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................................GACGCTGGCTGGTATTTGA............................................................................1911.001.00---------------------------------------------------------------------1.00---------------------------------------------------------
............................................................................................................................................GTGTGGGTGGTAGGAGACGC..........................................................................................2011.001.00-----------------------1.00-------------------------------------------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGATTA.......................................................................................2211.003.00--------------------------------1.00----------------------------------------------------------------------------------------------
............................................................................................................................................GTGTGGGTGGTAGGAGACGCTA........................................................................................2211.0027.00-------1.00-----------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GTGGGTGGTAGGAGACGCTGGT......................................................................................221.000.00---------------------------------------------------------------------------1.00---------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTGGTAT....................................................................................2511.0018.00--1.00----------------------------------------------------------------------------------------------------------------------------
..............................................................................................................................................GTGGGTGGTAGGAGACGCT.........................................................................................1911.001.00--1.00----------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGATT........................................................................................2111.003.00-1.00-----------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTGGC......................................................................................2311.001.00----------------------------------------------1.00--------------------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTGGATT....................................................................................2511.0018.00--1.00----------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTGGAA.....................................................................................2411.0018.00----------------------------------------1.00--------------------------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCCG........................................................................................2111.006.00---1.00---------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGAA.........................................................................................2011.003.00------1.00------------------------------------------------------------------------------------------------------------------------
............................................................................................................................................GTGTGGGTGGTAGGAGACGCTGTGA.....................................................................................2511.008.00---------1.00---------------------------------------------------------------------------------------------------------------------
............................................................................................................................................GTGTGGGTGGTAGGAGACGCAAAA......................................................................................2411.001.00-------------------1.00-----------------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................TAAAGGAGGTTGATGTTCGCTACACGGA......2811.001.00----------------------------------1.00--------------------------------------------------------------------------------------------
............................................................................................................................................GTGTGGGTGGTAGGAGACGG..........................................................................................2011.002.00--------1.00----------------------------------------------------------------------------------------------------------------------
...........................................................................................................................................GGTGTGGGTGGTAGGAGACGCTG........................................................................................2311.001.00----------------------------------------------------------------------------------------------------------------1.00--------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTGATA.....................................................................................2411.0018.00------------------------------------------------------------------------------------1.00------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTGGA......................................................................................2311.0018.00--------------1.00----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................................................................................................GAGGTTGATGTTCGCTCG...........181.000.00------------------------------------------------------------------------------------------------------------------------------1.00
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTAAA......................................................................................2311.0059.00----------------------------------------------1.00--------------------------------------------------------------------------------
............................................................................................................................................................................................................................GGAGGTTGATGTTCGCTACACGGA......2411.001.00-------------------------------------------------------------------------------------------------------------------1.00-----------
......................................................................................................................................................TAGGAGACGCTGGCTGGTATTTGA............................................................................2411.001.00------------------------------------------------------------------------------------------------1.00------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTGGAG.....................................................................................2411.0018.00---------------1.00---------------------------------------------------------------------------------------------------------------
.............................TAAAATTGTATCTACTCTGGGTGATGG..................................................................................................................................................................................................2711.001.00----------------------------------1.00--------------------------------------------------------------------------------------------
......................................................................................ACCAGCCCAACCCCTACTT.................................................................................................................................................191.000.00-----------------------------------------------------------------------------------------------------1.00-------------------------
............................................................................................................................................GTGTGGGTGGTAGGAGACGCTGGAT.....................................................................................2511.0028.00---------------------------------1.00---------------------------------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGAAAT.......................................................................................2211.003.00----------------------1.00--------------------------------------------------------------------------------------------------------
............................................................................................................................................GTGTGGGTGGTAGGAGACGT..........................................................................................2011.002.00-----------------------------------1.00-------------------------------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACCATG........................................................................................211.000.00----------------------------------------------------1.00--------------------------------------------------------------------------
.......................................................................................................................................................AGGAGACGCTGGCTGGTATTAAA............................................................................231.000.00------------------------1.00------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................TTTGACCAGGTACTTTTCC..............................................................191.000.00----------------------------------------------------------------------1.00--------------------------------------------------------
............................................................................................................................................GTGTGGGTGGTAGGAGACGCTGGAAAT...................................................................................2711.0028.00--------------1.00----------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTGGAAT....................................................................................2511.0018.00-----------------------1.00-------------------------------------------------------------------------------------------------------
............................................................................................................................................GTGTGGGTGGTAGGAGACGGT.........................................................................................2111.002.00------------1.00------------------------------------------------------------------------------------------------------------------
.....................................................................................CACCAGCCCAACCCCTCGTG.................................................................................................................................................201.000.00----------------------------------------------------------------------------------------1.00--------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGAT.........................................................................................2011.003.00----------1.00--------------------------------------------------------------------------------------------------------------------
............................................................................................................................................GTGTGGGTGGTAGGAGACGCTGGC......................................................................................2411.001.00-----------------------------1.00-------------------------------------------------------------------------------------------------
............................................................................................................................................GTGTGGGTGGTAGGAGACGCTGTTT.....................................................................................2511.008.00---------------------------------------------------1.00---------------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTGGT......................................................................................2311.0018.00----------------------------------------------------------------------------------------------------------1.00--------------------
............................................................................................................................................GTGTGGGTGGTAGGAGACGCA.........................................................................................2111.001.00-------------------------------------------------1.00-----------------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTGGAT.....................................................................................2411.0018.00------------------------------------------------------------------------1.00------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACCCTG........................................................................................211.000.00--------------------------1.00----------------------------------------------------------------------------------------------------
........................................................................................................................................................................................................................TAAAGGAGGTTGATGTTCG...............1911.001.00-----------------------------------------------------1.00-------------------------------------------------------------------------
............................................................................................................................................GTGTGGGTGGTAGGAGACGCGG........................................................................................2211.001.00------------------------------------------------------------1.00------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTGGCAT....................................................................................2511.001.00--------------------1.00----------------------------------------------------------------------------------------------------------
..................................................................................................................................................................................................................................TGATGTTCGCTACACGGAAGCCTGGTA271.000.00-------------------------------------------------------------------------------------------------------------------------1.00-----
............................................................................................................................................GTGTGGGTGGTAGGAGGCG...........................................................................................191.000.00------1.00------------------------------------------------------------------------------------------------------------------------
...................................................................................................................................GTGGACAGGGTGTGGGGATC...................................................................................................201.000.00------------1.00------------------------------------------------------------------------------------------------------------------
.....................................................................................................TCCAGAGCCCTGAGAGC....................................................................................................................................171.000.00----------------1.00--------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTATAA.....................................................................................2411.0059.00----1.00--------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTGGCT.....................................................................................2411.001.00---------------------------------------------------------------------------------------------------------------1.00---------------
.............AATTTCAGAAGGCAATTAAAATTGTATCTACTCTG..........................................................................................................................................................................................................3511.001.00---------------------------------------------1.00---------------------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTGTT......................................................................................2311.0018.00----1.00--------------------------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................................GTTGATGTTCGCTACACGGAAGCCTG2611.001.00------------------------------------------------------------------------------------------------------------------------1.00------
............................................................................................................................................GTGTGGGTGGTAGGAGGTG...........................................................................................191.000.00--------------------------------------------------------------------------------------------------------------------1.00----------
............................................................................................................................................GTGTGGGTGGTAGGAGACGCTGAA......................................................................................2411.008.00---------1.00---------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCAA........................................................................................2111.006.00----1.00--------------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGTA.........................................................................................2011.003.00----------1.00--------------------------------------------------------------------------------------------------------------------
.............................................................................................................................................TGTGGGTGGTAGGAGACGCTGTATT....................................................................................2511.0018.00-------------------------------------------------------------------------------------------------------1.00-----------------------
...................................................................................................................................................................................TACTTTTTTTATCATCCACA...................................................2011.001.00--------1.00----------------------------------------------------------------------------------------------------------------------
............................................................................................................................................GTGTGGGTGGTAGGAGACGCTGGTAT....................................................................................2611.0028.00--1.00----------------------------------------------------------------------------------------------------------------------------
.........................................................................................................................................................................................................................AAAGGAGGTTGATGTTCGCTAC...........2211.001.00-----------------------------------------------------------------------------------------------------------------------1.00-------
.............................................................................................................................................TGTGGGTGGTAGGAGAGGCT.........................................................................................201.000.00-1.00-----------------------------------------------------------------------------------------------------------------------------
....................................................................................................................................................................................................................AACCTAAAGGAGGTTGA.....................1720.500.50---------------------0.50---------------------------------------------------------------------------------------------------------
................................................................................................................................................................................................................TCCTAACCTAAAGGAGG.........................1730.330.33-------------------------------------0.33-----------------------------------------------------------------------------------------
..............................................................................................................................................GTGGGTGGTAGGAGA.............................................................................................1580.250.25---------------------------------------------------------------0.120.12--------------------------------------------------------------
.........................................................................................................................................................................................................................................CGCTACACGGAAG....1360.170.17----------------0.17--------------------------------------------------------------------------------------------------------------

Antisense strand
AGATGTGTCGTCCAATTTCAGAAGGCAATTAAAATTGTATCTACTCTGGGTGATGGATGTCTTTGAGGCCACCTGTGCCCTGGGTCACCAGCCCAACCCCTTCCAGAGCCCTGAGATCCCACAGCCTCATAGTGGACAGGGTGTGGGTGGTAGGAGACGCTGGCTGGTATTTGACCAGGTACTTTTTTTATCATCCACAGGCCAAGCTTCCTAACCTAAAGGAGGTTGATGTTCGCTACACGGAAGCCTG
.............................................................................................................................................((((((((((((((((...((.(((((.....))))).))..))))))))))))))))...................................................
........................................................................................................................................137............................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR345204(SRX097265)
source: size fractionated RNA from mouse hipp. (brain)
SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
SRR042471(GSM539863)
mouse TFHS cells [09-002]. (spleen)
SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)
SRR042459(GSM539851)
mouse neutrophil cells replicate 1 [09-002]. (blood)
mjTestesWT4()
Testes Data. (testes)
SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)
SRR042477(GSM539869)
mouse brain tissue [09-002]. (brain)
SRR546155(SRX180174)
Global profiling of miRNA and the hairpin pre. (ago2 Neuroblastoma)
SRR042458(GSM539850)
mouse basophil cells [09-002]. (b cell)
SRR042463(GSM539855)
mouse natural killer cells [09-002]. (spleen)
SRR391853(GSM852148)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR345205(SRX097266)
source: size fractionated RNA from mouse hipp. (brain)
SRR345197(SRX097258)
source: size fractionated RNA from mouse hipp. (brain)
SRR553582(SRX182788)
source: Brain. (Brain)
SRR042473(GSM539865)
mouse nTreg cells [09-002]. (lymph)
SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)
SRR345196(SRX097257)
source: size fractionated RNA from mouse hipp. (brain)
SRR042469(GSM539861)
mouse Th2 cells [09-002]. (lymph)
SRR042464(GSM539856)
mouse CD4+CD8+ T cells (thymus) [09-002]. (thymus)
SRR042450(GSM539842)
mouse B cells activated in vitro with LPS/IL4 replicate 3 [09-002]. (b cell)
SRR038742(GSM527277)
small RNA-Seq. (dgcr8 brain)
SRR042447(GSM539839)
mouse mature B cells (spleen) replicate 2 [09-002]. (b cell)
SRR042449(GSM539841)
mouse B cells activated in vitro with LPS/IL4 replicate 2 [09-002]. (b cell)
SRR042484(GSM539876)
mouse salivary gland tissue [09-002]. (salivary gland)
SRR042445(GSM539837)
mouse immature B cells [09-002]. (b cell)
SRR553583(SRX182789)
source: Cerebellum. (Cerebellum)
SRR306533(GSM750576)
19-24nt. (ago2 brain)
SRR345207(SRX097268)
source: size fractionated RNA from mouse hipp. (brain)
SRR042448(GSM539840)
mouse B cells activated in vitro with LPS/IL4 replicate 1 [09-002]. (b cell)
SRR038744(GSM527279)
small RNA-Seq. (brain)
SRR279907(GSM689057)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR059769(GSM562831)
Treg_Drosha. (spleen)
SRR402762(SRX117945)
source: ES E14 male cells. (ESC)
SRR028732(GSM400969)
Mili-Tdrd1 KO associated. (mili testes)
SRR525244(SRA056111/SRX170320)
Mus musculus domesticus miRNA sequencing. (ago2 Blood)
mjLiverKO3()
Liver Data. (Zcchc11 liver)
SRR279904(GSM689054)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR345206(SRX097267)
source: size fractionated RNA from mouse hipp. (brain)
SRR042444(GSM539836)
mouse pre B cells [09-002]. (b cell)
SRR042457(GSM539849)
mouse mast cells [09-002]. (bone marrow)
SRR346422(SRX098264)
Global profiling of miRNA and the hairpin pre. (Muscle)
SRR206940(GSM723281)
other. (brain)
SRR391852(GSM852147)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR346424(SRX098266)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
GSM519104(GSM519104)
mouse_granulocyte_nuclei_smallRNAs. (cell line)
SRR553602(SRX182808)
source: Sertoli cells. (Sertoli cells)
SRR306544(GSM750587)
19-24nt. (ago2 brain)
SRR306535(GSM750578)
19-24nt. (ago2 brain)
SRR042472(GSM539864)
mouse iTreg cells [09-002]. (lymph)
SRR306540(GSM750583)
19-24nt. (ago2 brain)
SRR042454(GSM539846)
mouse germinal center B cells (lymph node) [09-002]. (b cell)
SRR042460(GSM539852)
mouse neutrophil cells replicate 2 [09-002]. (blood)
SRR346425(SRX098267)
Global profiling of miRNA and the hairpin pre. (Neuroblastoma)
GSM509278(GSM509278)
small RNA cloning by length. (piwi testes)
SRR391851(GSM852146)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR042452(GSM539844)
mouse B1 B cells [09-002]. (b cell)
SRR059767(GSM562829)
DN3_Dicer. (thymus)
SRR306534(GSM750577)
19-24nt. (ago2 brain)
SRR029123(GSM416611)
NIH3T3. (cell line)
SRR042443(GSM539835)
mouse pro B cells [09-002]. (b cell)
SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)
SRR279906(GSM689056)
cell type: mouse embryonic stem cellcell line. (ESC)
SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)
SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)
SRR065054(SRR065054)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR402766(SRX117949)
source: ES PGK female cells. (ESC)
SRR073955(GSM629281)
total RNA. (blood)
SRR306543(GSM750586)
19-24nt. (ago2 brain)
SRR073954(GSM629280)
total RNA. (blood)
SRR037924(GSM510462)
e9p5_rep2. (embryo)
SRR029042(GSM433294)
18.5dpc_hetero_tdrd1-KO. (tdrd1 testes)
SRR032476(GSM485234)
sRNA_delayed_deep_sequencing. (uterus)
SRR038740(GSM527275)
small RNA-Seq. (dicer brain)
SRR306536(GSM750579)
19-24nt. (ago2 brain)
SRR206941(GSM723282)
other. (brain)
SRR346423(SRX098265)
Global profiling of miRNA and the hairpin pre. (Brain)
SRR042487(GSM539879)
mouse BclXL B activated with LPS/IL4 [BalbC] [09-002]. (spleen)
GSM510456(GSM510456)
newborn_rep12. (total RNA)
SRR042470(GSM539862)
mouse Th17 cells [09-002]. (lymph)
SRR248525(GSM733813)
cell type: Thy1- spermatogonial stem cellstra. (testes)
SRR077866(GSM637803)
18-30 nt small RNAs. (liver)
SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)
SRR029036(GSM433288)
18dpp_hetero_tdrd6-KO. (tdrd6 testes)
SRR042456(GSM539848)
mouse hematopoetic progenitor cells [09-002]. (bone marrow)
SRR042455(GSM539847)
mouse plasma cells [09-002]. (blood)
GSM510444(GSM510444)
brain_rep5. (brain)
SRR069809(GSM610965)
small RNA sequencing; sample 1. (testes)
GSM314553(GSM314553)
ESC dcr (Illumina). (ESC)
SRR065047(SRR065047)
Tissue-specific Regulation of Mouse MicroRNA . (liver)
SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
GSM509276(GSM509276)
small RNA cloning by length. (testes)
SRR306537(GSM750580)
19-24nt. (ago2 brain)
SRR042475(GSM539867)
mouse embryonic fibroblast cells [09-002]. (fibroblast)
SRR042468(GSM539860)
mouse Th1 cells [09-002]. (lymph)
SRR034121(GSM466731)
Mili IP_Tdrd9-/- replicate2. (mili testes)
SRR042446(GSM539838)
mouse mature B cells (spleen) replicate 1 [09-002]. (b cell)
SRR306532(GSM750575)
19-24nt. (ago2 brain)
SRR059770(GSM562832)
Treg_Dicer. (spleen)
SRR042474(GSM539866)
mouse embryonic stem cells [09-002]. (ESC)
SRR065052(SRR065052)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR391847(GSM852142)
gender: femalegenotype/variation: ADAR2-/-/AD. (embryo)
SRR037903(GSM510439)
testes_rep4. (testes)
mjLiverWT3()
Liver Data. (liver)
SRR023851(GSM307160)
ZHBT-c412hsmallrna_rep1. (cell line)
SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)
GSM640580(GSM640580)
small RNA in the liver with paternal Low pro. (liver)
SRR042488(GSM539880)
mouse BclXL germinal center B cells [BalbC] [09-002]. (B cell)
GSM640578(GSM640578)
small RNA in the liver with paternal control. (liver)
SRR306539(GSM750582)
19-24nt. (ago2 brain)
SRR346415(SRX098256)
source: Testis. (Testes)
SRR685340(GSM1079784)
Small RNAs (15-50 nts in length) from immorta. (dicer cell line)
SRR059765(GSM562827)
DN3_control. (thymus)
SRR032477(GSM485235)
sRNA_activation_deep_sequencing. (uterus)
SRR037911(GSM510448)
newborn_rep4. (total RNA)
SRR206942(GSM723283)
other. (brain)
SRR042467(GSM539859)
mouse T cells activated in vitro with Concanavalin A [09-002]. (spleen)
SRR040489(GSM533912)
E18.5 Ago2 catalytically inactive LIVER small RNA. (ago2 liver)
SRR065055(SRR065055)
Tissue-specific Regulation of Mouse MicroRNA . (jejunum)
SRR391849(GSM852144)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)
SRR346418(SRX098259)
Global profiling of miRNA and the hairpin pre. (Liver)
SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)
SRR042480(GSM539872)
mouse kidney tissue [09-002]. (kidney)
SRR042451(GSM539843)
mouse B cells activated in vitro with LPS/aIgD-Dextran [09-002]. (b cell)
SRR039152(GSM471929)
HL1_siNon_smallRNAseq. (muscle)
SRR306538(GSM750581)
19-24nt. (ago2 brain)
mjLiverWT2()
Liver Data. (liver)
........................GCAATTAAAATTGTATCTATA............................................................................................................................................................................................................. 211.000.00-----------------------------------------------------------------------------------1.00-------------------------------------------
........................................................................................CAGCCCAACCCCTTCCATCG.............................................................................................................................................. 201.000.00---------------------------------------------------------1.00---------------------------------------------------------------------
......................................................................................................................................................................................TTTTTTTATCATCCACAGGCCAAGCT.......................................... 2611.001.00------------------------------------------------------1.00------------------------------------------------------------------------
.................................................................................................................AGATCCCACAGCCTCAGAAG..................................................................................................................... 201.000.00------------1.00------------------------------------------------------------------------------------------------------------------
.GATGTGTCGTCCAATCTAT...................................................................................................................................................................................................................................... 191.000.00------------------------------------------------------------------------------------------------------1.00------------------------