ID: mmu-mir-7076
GENE: Ctrb1(5)
chr8:114213451-114213700-


(2)
AGO1.ip 		(2)
AGO3.ip 		(9)
BRAIN 		(1)
CELL-LINE 		(2)
EMBRYO 		(1)
ESC 		(1)
LIVER 		(1)
OTHER.mut 		(3)
PANCREAS 		(2)
PIWI.ip 		(4)
SKIN 		(5)
TESTES 		(1)
THYMUS

Sense strand
CTCAGTGGTCCAACTTGTTTTCTGTTCCTTCTCCTGTGACATGCCTGGCTGGGGGTAGCTGTGCCTCTCTTCATCCCTCGGGGAATAACTGGGGTCAGGAGGGTCTGTGTGTGGGGGGACCCAATGTTTCCAGGGGAGGTGGTATGGTCTCAGCGGGGTCCGGGTTGGCTGTGACAACATGACTACCACTGTCTCCCCAGGCTGTGGGGTCCCTGCCATCCAACCCGTGCTGACCGGTCTGTCCAGGATC
....................................................................................................................................(((((((..((.(((((....(((...))).((((.......))))..)))))..))..)))))))....................................................
..............................................................................................................................127......................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR042481(GSM539873)
mouse pancreatic tissue [09-002]. (pancreas)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR206939(GSM723280)
other. (brain)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		mjTestesWT3()
Testes Data. (testes)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
...................................................................................................................................AGGGGAGGTGGTATGGTCTCA..................................................................................................2117.007.002.003.002.00------------------------
...................................................................................................................................................................................TGACTACCACTGTCTCCCCAGA.................................................2216.001.003.003.00-------------------------
...................................................................................................................................AGGGGAGGTGGTATGGTCTCAAA................................................................................................2315.007.001.001.003.00------------------------
...................................................................................................................................AGGGGAGGTGGTATGGTCTCAG.................................................................................................2215.005.003.001.001.00------------------------
...................................................................................................................................................................................TGACTACCACTGTCTCCCCAGT.................................................2214.001.001.003.00-------------------------
..................................................................................................................................................................................ATGACTACCACTGTCTCCCCAGA.................................................2313.002.003.00--------------------------
................................................................................................................................................................................ACATGACTACCACTGTCTCCCCAGT.................................................253.000.002.00-1.00------------------------
...................................................................................................................................AGGGGAGGTGGTATGGTCTCT..................................................................................................2112.002.00-2.00-------------------------
.................................................................................................................................................................................................................................CGTGCTGACCGGTCTGTCCAGGATC2512.002.00-2.00-------------------------
..................................................................................................................................................................................ATGACTACCACTGTCTCCCCAGAA................................................2412.002.001.00-1.00------------------------
...................................................................................................................................AGGGGAGGTGGTATGGTCTCAGCATT.............................................................................................2612.001.00-2.00-------------------------
..................................................................................................................................................................................ATGACTACCACTGTCTCCCCAG..................................................2212.002.002.00--------------------------
...................................................................................................................................................................................TGACTACCACTGTCTCCCCAGAA................................................2312.001.002.00--------------------------
...................................................................................................................................AGGGGAGGTGGTATGGTCTC...................................................................................................2012.002.002.00--------------------------
...................................................................................................................................AGGGGAGGTGGTATGGTCT....................................................................................................1911.001.00-1.00-------------------------
...................................................................................................................................AGGGGAGGTGGTATGGTCTCAA.................................................................................................2211.007.001.00--------------------------
..................................................................................................................................................................................................................................GTGCTGACCGGTCTGTCCAGGAT.2311.001.00-1.00-------------------------
..........................................................................................................................AATGTTTCCAGGGGAAGGC.............................................................................................................191.000.00-------------1.00-------------
...........................................................................................................................................................................TGACAACATGACTACCACTGTCTCCCCAGAA................................................311.000.001.00--------------------------
...................................................................................................................................AGGGGAGGTGGTATGGCCT....................................................................................................191.000.00-1.00-------------------------
..........................................................................................................................................................................................................................TCCAACCCGTGCTGACCGGTCTGT........2411.001.00--------------------1.00------
....................................................................................................................................................................................................................................GCTGACCGGTCTGTCCAGGAT.2111.001.001.00--------------------------
............................................................................................................................................................................................................................CAACCCGTGCTGACCGGTCTGT........2211.001.00--1.00------------------------
.................................................................................................................................................................................CATGACTACCACTGTCTCCCCAGAA................................................251.000.001.00--------------------------
.........................................................................................................................................................................................................................ATCCAACCCGTGCTGACCGGTCTGTCCAGGATC3311.001.001.00--------------------------
........................................ATGCCTGGCTGGGGGGGGC...............................................................................................................................................................................................191.000.00---------------------1.00-----
.................................................................................................................................CCAGGGGAGGTGGTATGGTCTCA..................................................................................................2311.001.001.00--------------------------
...................................................................................................AGGGTCTGTGTGTGGGACAT...................................................................................................................................201.000.00--------1.00------------------
...................TTCTGTTCCTTCTCCGC......................................................................................................................................................................................................................171.000.00----1.00----------------------
...................................................................................................................................AGGGGAGGTGGTATGGTCTCAGA................................................................................................2311.005.00-1.00-------------------------
......................................ACATGCCTGGCTGGGGGTAGCTGTGCCTCTCT....................................................................................................................................................................................3211.001.00-1.00-------------------------
...................................................................................................................................AGGGGAGGTGGTATGGTCTCAGT................................................................................................2311.005.00--1.00------------------------
....................................................................................................................................................................................GACTACCACTGTCTCCCCAGAA................................................221.000.001.00--------------------------
...................................................................................................................................AGGGGAGGTGGTATGGTCTCAGC................................................................................................2311.001.00--1.00------------------------
.............................................TGGCTGGGGGTAGCTGGGAG.........................................................................................................................................................................................201.000.00----1.00----------------------
...........................................................................................................................................................................................................................CCAACCCGTGCTGACCGGT............1911.001.00---------1.00-----------------
...................................................................................................................................................................................TGACTACCACTGTCTCCCCAG..................................................2111.001.001.00--------------------------
..........................................................................................................................................................................................................................TCCAACCCGTGCTGACCGGTCTGTC.......2511.001.001.00--------------------------
...................................................................................................................................AGGGGAGGTGGTATGGTCTCAGTT...............................................................................................2411.005.00--1.00------------------------
.......................................................................................................................................GAGGTGGTATGGTCTGAG.................................................................................................181.000.00-----------1.00---------------
.............................................................................................GTCAGGAGGGTCTGTGTG...........................................................................................................................................1811.001.00-1.00-------------------------
...................................................................................................................................AGGGGAGGTGGTATGGTCTCTAT................................................................................................2311.002.00--1.00------------------------
.................................................................................................................................................................................CATGACTACCACTGTCTCCCCAGA.................................................241.000.001.00--------------------------
......................................................................................................................................GGAGGTGGTATGGTC.....................................................................................................1540.250.25-----------------------0.25---
......................................................................................................................................................................................................AGGCTGTGGGGTCCCTG...................................1740.250.25------------------------0.25--

Antisense strand
CTCAGTGGTCCAACTTGTTTTCTGTTCCTTCTCCTGTGACATGCCTGGCTGGGGGTAGCTGTGCCTCTCTTCATCCCTCGGGGAATAACTGGGGTCAGGAGGGTCTGTGTGTGGGGGGACCCAATGTTTCCAGGGGAGGTGGTATGGTCTCAGCGGGGTCCGGGTTGGCTGTGACAACATGACTACCACTGTCTCCCCAGGCTGTGGGGTCCCTGCCATCCAACCCGTGCTGACCGGTCTGTCCAGGATC
....................................................................................................................................(((((((..((.(((((....(((...))).((((.......))))..)))))..))..)))))))....................................................
..............................................................................................................................127......................................................................200................................................
SizePerfect hitTotal NormPerfect NormSRR065058(SRR065058)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR065059(SRR065059)
Tissue-specific Regulation of Mouse MicroRNA . (pancreas)		SRR042481(GSM539873)
mouse pancreatic tissue [09-002]. (pancreas)		Ago1IP812(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR279905(GSM689055)
cell type: mouse embryonic stem cellcell line. (ESC)		SRR345199(SRX097260)
source: size fractionated RNA from mouse hipp. (brain)		Ago1IP517(Rui)
Quantitative functions of Argonaute proteins . (ago1 skin)		SRR248523(GSM733811)
cell type: Thy1+ spermatogonial stem cellstra. (testes)		SRR391848(GSM852143)
gender: femalegenotype/variation: wild typeti. (embryo)		SRR077866(GSM637803)
18-30 nt small RNAs. (liver)		SRR685339(GSM1079783)
Small RNAs (15-50 nts in length) from immorta. (cell line)		SRR038744(GSM527279)
small RNA-Seq. (brain)		SRR206939(GSM723280)
other. (brain)		SRR391846(GSM852141)
gender: femalegenotype/variation: ADAR2-/-tis. (embryo)		Ago3IP812(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR029043(GSM433295)
18.5dpc_homo_tdrd1-KO. (tdrd1 testes)		SRR034119(GSM466729)
Mili IP_Tdrd9+/- replicate2. (mili testes)		SRR059765(GSM562827)
DN3_control. (thymus)		SRR034118(GSM466728)
Mili IP_Tdrd9+/- replicate1. (mili testes)		mjTestesWT3()
Testes Data. (testes)		SRR346417(SRX098258)
Global profiling of miRNA and the hairpin pre. (Brain)		SRR345201(SRX097262)
source: size fractionated RNA from mouse hipp. (brain)		Ago3IP805(Rui)
Quantitative functions of Argonaute proteins . (ago3 skin)		SRR345203(SRX097264)
source: size fractionated RNA from mouse hipp. (brain)		SRR345198(SRX097259)
source: size fractionated RNA from mouse hipp. (brain)		SRR345200(SRX097261)
source: size fractionated RNA from mouse hipp. (brain)		SRR345202(SRX097263)
source: size fractionated RNA from mouse hipp. (brain)
.............................................................................................................................GTTTCCAGGGGAGGTGGGTCC........................................................................................................ 217.000.00---1.00--2.00-----1.00-1.00--1.00----1.00----
....................................................................................................................................................................................................................CTGCCATCCAACCCGTGCTGACCGGT............ 2612.002.00----------------1.00-1.00--------
...............TGTTTTCTGTTCCTTCTCCTGTGACA................................................................................................................................................................................................................. 2611.001.00-------1.00-------------------
..........................................................................................................................................................................................CACTGTCTCCCCAGGCCG.............................................. 181.000.00-----1.00---------------------
.............................................................................................................................GTTTCCAGGGGAGGTGGGTTC........................................................................................................ 211.000.00---1.00-----------------------
................GTTTTCTGTTCCTTCTCCTGTGACA................................................................................................................................................................................................................. 2511.001.00-------1.00-------------------
...........................................................................................................................ATGTTTCCAGGGGAGGTGCCAA......................................................................................................... 221.000.00----------1.00----------------
.............................................................................................................................GTTTCCAGGGGAGGTGGGTC......................................................................................................... 201.000.00---1.00-----------------------
........TCCAACTTGTTTTCTGTTCCTTCTCCT....................................................................................................................................................................................................................... 2711.001.00-------------------1.00-------
......................................................................................................................................................................................CTACCACTGTCTCCCCGTAG................................................ 201.000.00-----1.00---------------------
.............................................................................................................................GTTTCCAGGGGAGGTGGGT.......................................................................................................... 191.000.00---------------1.00-----------
........................................................................................................................................................................................................................CATCCAACCCGTGC.................... 1460.170.17-------------------------0.17-
.........................................................................................................................................................................................CCACTGTCTCCCCAGG................................................. 1680.120.12--------------------------0.12